| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is blh [H]
Identifier: 146282863
GI number: 146282863
Start: 2753281
End: 2754144
Strand: Direct
Name: blh [H]
Synonym: PST_2522
Alternate gene names: 146282863
Gene position: 2753281-2754144 (Clockwise)
Preceding gene: 146282862
Following gene: 146282864
Centisome position: 60.28
GC content: 65.28
Gene sequence:
>864_bases ATGAATGTCCACGTCGAAGCCTTCTTCGATCCCGCGACCATTACCTACAGCTACGTGGTCAGCGACCTGGAAACGCGCCA GTGTGCGGTGATCGACTCGGTGCTGGACTACGACCCGGCATCCGGCCGCACCTCCCATGCAAGCGCGCAGCGCCTGGTCG ACTACGTGCGCAACCAGGACCTGCGGGTGCAGTGGCTGCTGGAAACCCATGTGCACGCCGACCATCTGAGCGCGGCGCCC TATCTCAAGCAGCACCTGGGCGGCAAACTGGCGATCGGTGATCGCATCACCGTGGTGCAGGACACCTTCGGCAAGCTGTT CAACGCAGGCAGCGGGTTCGCCACCGATGGCCGTCAGTTCGATCACCTGTTCCACGACGGCGACCGCTTCCAGGTCGGCA ACGTGCAGGCCCGCGCCCTCCACACCCCGGGCCACACCCCGGCCTGCATGACCTACGTCATCGGTGACGCCGCCTTCGTC GGTGACACCCTGTTCATGCCCGACTACGGCACCGCCCGCTGCGATTTTCCCGGCGGCGACGCGCGCACCCTGTACCAGTC GATCCAGAAGCTGTTCGCCCTGCCAGGCGAGACCCGGGTGTTCATGTGCCATGACTACAAGGCGCCCGGGCGCGAGGAGT TTCTCTACGAGACCACCATCGCCGCCGAGCGCGAGCACAACGTGCATATCCACAGCGGTATCAGCGAGGAGCAGTTCGTC GCCATGCGCACCGCACGCGATGCCACGCTGGGCATGCCCACCCTGATCCTGCCGTCGGTGCAGATCAACATGCGCGGCGG CGAACTGCCCGAGCCCGAAAGCAACGGGACGCGCTACCTGAAGATCCCCCTGGACGTGCTGTAA
Upstream 100 bases:
>100_bases ACTAATAACCAATAAATCTAAGCATATAACCTAATTCAGGGCTAAGATCTCTCCGGACAGATACCCCCACCGGTATTAAT CTGAAGAGGAGCCCCGCGCC
Downstream 100 bases:
>100_bases CCCCCGAATGCGGAGGACGTCGACATGCAAACAATAAAACGACTGACCCCTTTTCTCTCCGTCGCGGCCCAGCTGCAACC GGCCGACATGGCACTGCTGG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNVHVEAFFDPATITYSYVVSDLETRQCAVIDSVLDYDPASGRTSHASAQRLVDYVRNQDLRVQWLLETHVHADHLSAAP YLKQHLGGKLAIGDRITVVQDTFGKLFNAGSGFATDGRQFDHLFHDGDRFQVGNVQARALHTPGHTPACMTYVIGDAAFV GDTLFMPDYGTARCDFPGGDARTLYQSIQKLFALPGETRVFMCHDYKAPGREEFLYETTIAAEREHNVHIHSGISEEQFV AMRTARDATLGMPTLILPSVQINMRGGELPEPESNGTRYLKIPLDVL
Sequences:
>Translated_287_residues MNVHVEAFFDPATITYSYVVSDLETRQCAVIDSVLDYDPASGRTSHASAQRLVDYVRNQDLRVQWLLETHVHADHLSAAP YLKQHLGGKLAIGDRITVVQDTFGKLFNAGSGFATDGRQFDHLFHDGDRFQVGNVQARALHTPGHTPACMTYVIGDAAFV GDTLFMPDYGTARCDFPGGDARTLYQSIQKLFALPGETRVFMCHDYKAPGREEFLYETTIAAEREHNVHIHSGISEEQFV AMRTARDATLGMPTLILPSVQINMRGGELPEPESNGTRYLKIPLDVL >Mature_287_residues MNVHVEAFFDPATITYSYVVSDLETRQCAVIDSVLDYDPASGRTSHASAQRLVDYVRNQDLRVQWLLETHVHADHLSAAP YLKQHLGGKLAIGDRITVVQDTFGKLFNAGSGFATDGRQFDHLFHDGDRFQVGNVQARALHTPGHTPACMTYVIGDAAFV GDTLFMPDYGTARCDFPGGDARTLYQSIQKLFALPGETRVFMCHDYKAPGREEFLYETTIAAEREHNVHIHSGISEEQFV AMRTARDATLGMPTLILPSVQINMRGGELPEPESNGTRYLKIPLDVL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=268, Percent_Identity=29.8507462686567, Blast_Score=114, Evalue=1e-25, Organism=Escherichia coli, GI1787158, Length=193, Percent_Identity=29.0155440414508, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17538952, Length=257, Percent_Identity=28.0155642023346, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI221330176, Length=263, Percent_Identity=30.7984790874525, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 31886; Mature: 31886
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVHVEAFFDPATITYSYVVSDLETRQCAVIDSVLDYDPASGRTSHASAQRLVDYVRNQD CCEEEEEEECCCCEEEEHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC LRVQWLLETHVHADHLSAAPYLKQHLGGKLAIGDRITVVQDTFGKLFNAGSGFATDGRQF CEEEEEEECCCCHHHHCCCHHHHHHCCCEEEECCEEEEEHHHHHHHHCCCCCCCCCCHHH DHLFHDGDRFQVGNVQARALHTPGHTPACMTYVIGDAAFVGDTLFMPDYGTARCDFPGGD HHHHCCCCEEEECCEEEEEEECCCCCCCEEEEECCCHHHHCCEEECCCCCCEECCCCCCC ARTLYQSIQKLFALPGETRVFMCHDYKAPGREEFLYETTIAAEREHNVHIHSGISEEQFV HHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHEEEHHHHCCCCCCEEEECCCCHHHEE AMRTARDATLGMPTLILPSVQINMRGGELPEPESNGTRYLKIPLDVL EHHHCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MNVHVEAFFDPATITYSYVVSDLETRQCAVIDSVLDYDPASGRTSHASAQRLVDYVRNQD CCEEEEEEECCCCEEEEHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC LRVQWLLETHVHADHLSAAPYLKQHLGGKLAIGDRITVVQDTFGKLFNAGSGFATDGRQF CEEEEEEECCCCHHHHCCCHHHHHHCCCEEEECCEEEEEHHHHHHHHCCCCCCCCCCHHH DHLFHDGDRFQVGNVQARALHTPGHTPACMTYVIGDAAFVGDTLFMPDYGTARCDFPGGD HHHHCCCCEEEECCEEEEEEECCCCCCCEEEEECCCHHHHCCEEECCCCCCEECCCCCCC ARTLYQSIQKLFALPGETRVFMCHDYKAPGREEFLYETTIAAEREHNVHIHSGISEEQFV HHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHEEEHHHHCCCCCCEEEECCCCHHHEE AMRTARDATLGMPTLILPSVQINMRGGELPEPESNGTRYLKIPLDVL EHHHCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]