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The map label for this gene is lumQ [H]

Identifier: 146282803

GI number: 146282803

Start: 2687847

End: 2688668

Strand: Direct

Name: lumQ [H]

Synonym: PST_2462

Alternate gene names: 146282803

Gene position: 2687847-2688668 (Clockwise)

Preceding gene: 146282802

Following gene: 146282804

Centisome position: 58.85

GC content: 68.37

Gene sequence:

>822_bases
TTGGCGGGCTGGCAGCGTGCGGTTACCGTGTCCGGTCCGCAGAGCCCGCTTTCGAGATCGCCGATGCTATCGCTGCGCAA
CTACCAGCACGACCTCATTGCCCACAGCCACGACCACCCGCAACTGGTGTTCGGCCTGAGTGGCCAGCTGGAGTTCGAGA
TCGCCGGACGCGGCAGCCGGATCGGCGAACGCGGCCTGGCAATCGTCCCTGCAGCCGTGCATCACGCCTGTGCCAGTGTG
ACCGGCAGCCATTGCCTGGTGCTGGATGTGCCGTCCGAAGGCTGGCTGCGCCAGCGCCTGGGCCACCACTGCGAAAGCAG
CCTGCGGTTGCTGGACCGCCCGGACACGCTGCGTCTCGGCCCGACCCAGCAGAGCCTGGTGAGCTGGCTGGCGAGCAGCC
CGATCAACGATTCGGTGATCGCCGAGCAGGGTGCCGTCCTGCTGCTGGCCAGCCTCAACGGCGTACATGGCGCCCCGTCC
GACTCTACCGCATTGCCGCTGGCCGCCATCGACAGCTTCATTGACCAGCATCTCGCCCACCCGCTGCAGGTCGCCGATCT
GGCACGCATCGCCGGTCTGTCCGTGGCACGGCTGCACGCGCGTTTTCTAGGCGAGACTGGCTGCACGCCCATGGAGTACA
TTCGCCGGCGCCGCCTGCAACAGGGCGAGGCGCTGCTGCACGACACCCGCCTGCCGGTTGGCGAGATCGCCGCGCGCGTC
GGTTATGGCTCGCAAAGCGCCTTCACCGCCGCCCTGGTGCGCGCCCGAGGCTGCACGCCGCGCGCGCTGCGGCGAGAGTT
GCGCGACAAAATCGATGATTGA

Upstream 100 bases:

>100_bases
ACACCAACGGCGTGCAGAACTTCGACAAGGAGCGGGTAATCCAGGCGCTGCAACAGGCCGCCGAGAAACTCCGCGACAAG
GTCATCCTCTGATTTACTGA

Downstream 100 bases:

>100_bases
CGCGACAGACACCCGCTCGCCCGCGGCCTAGCATGGCCACTGATTCGTCAAGGTTCAGCTCGCCATGATCAGCTCGCTTC
ATATTCGCTGCGTAACGCGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAGWQRAVTVSGPQSPLSRSPMLSLRNYQHDLIAHSHDHPQLVFGLSGQLEFEIAGRGSRIGERGLAIVPAAVHHACASV
TGSHCLVLDVPSEGWLRQRLGHHCESSLRLLDRPDTLRLGPTQQSLVSWLASSPINDSVIAEQGAVLLLASLNGVHGAPS
DSTALPLAAIDSFIDQHLAHPLQVADLARIAGLSVARLHARFLGETGCTPMEYIRRRRLQQGEALLHDTRLPVGEIAARV
GYGSQSAFTAALVRARGCTPRALRRELRDKIDD

Sequences:

>Translated_273_residues
MAGWQRAVTVSGPQSPLSRSPMLSLRNYQHDLIAHSHDHPQLVFGLSGQLEFEIAGRGSRIGERGLAIVPAAVHHACASV
TGSHCLVLDVPSEGWLRQRLGHHCESSLRLLDRPDTLRLGPTQQSLVSWLASSPINDSVIAEQGAVLLLASLNGVHGAPS
DSTALPLAAIDSFIDQHLAHPLQVADLARIAGLSVARLHARFLGETGCTPMEYIRRRRLQQGEALLHDTRLPVGEIAARV
GYGSQSAFTAALVRARGCTPRALRRELRDKIDD
>Mature_272_residues
AGWQRAVTVSGPQSPLSRSPMLSLRNYQHDLIAHSHDHPQLVFGLSGQLEFEIAGRGSRIGERGLAIVPAAVHHACASVT
GSHCLVLDVPSEGWLRQRLGHHCESSLRLLDRPDTLRLGPTQQSLVSWLASSPINDSVIAEQGAVLLLASLNGVHGAPSD
STALPLAAIDSFIDQHLAHPLQVADLARIAGLSVARLHARFLGETGCTPMEYIRRRRLQQGEALLHDTRLPVGEIAARVG
YGSQSAFTAALVRARGCTPRALRRELRDKIDD

Specific function: Probable transcriptional regulator. Its target gene(s) is not yet known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 29492; Mature: 29361

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGWQRAVTVSGPQSPLSRSPMLSLRNYQHDLIAHSHDHPQLVFGLSGQLEFEIAGRGSR
CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCC
IGERGLAIVPAAVHHACASVTGSHCLVLDVPSEGWLRQRLGHHCESSLRLLDRPDTLRLG
CCCCCCEEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEC
PTQQSLVSWLASSPINDSVIAEQGAVLLLASLNGVHGAPSDSTALPLAAIDSFIDQHLAH
CCHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PLQVADLARIAGLSVARLHARFLGETGCTPMEYIRRRRLQQGEALLHDTRLPVGEIAARV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GYGSQSAFTAALVRARGCTPRALRRELRDKIDD
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGWQRAVTVSGPQSPLSRSPMLSLRNYQHDLIAHSHDHPQLVFGLSGQLEFEIAGRGSR
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCC
IGERGLAIVPAAVHHACASVTGSHCLVLDVPSEGWLRQRLGHHCESSLRLLDRPDTLRLG
CCCCCCEEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEC
PTQQSLVSWLASSPINDSVIAEQGAVLLLASLNGVHGAPSDSTALPLAAIDSFIDQHLAH
CCHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PLQVADLARIAGLSVARLHARFLGETGCTPMEYIRRRRLQQGEALLHDTRLPVGEIAARV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GYGSQSAFTAALVRARGCTPRALRRELRDKIDD
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7503752 [H]