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The map label for this gene is 146282739

Identifier: 146282739

GI number: 146282739

Start: 2619689

End: 2621398

Strand: Direct

Name: 146282739

Synonym: PST_2398

Alternate gene names: NA

Gene position: 2619689-2621398 (Clockwise)

Preceding gene: 146282738

Following gene: 146282740

Centisome position: 57.36

GC content: 68.65

Gene sequence:

>1710_bases
ATGAGCGAGCTGCTGCCCCACCTGCTTCGCCCCTGGTGGCTGGCCATCGTGCCGCTGCTGGCCTGGCTGCTCTGGCGCCT
CTGGCATCGGCAACTGCAGGTCGGCCGGTGGCAGCGGCTGCTGCCGGAAGCCTTTCACGCGGCCTTGCTGACCCGCGGCC
GGCTGCGCCACAGCCGCCTGCCCTGGCTGGTGCTGGGGCTCGCCTGGCTGCTGGCGGTCATCGCGCTGCTCGGCCCGAGT
TGGCAGCGCTTCGAGCAGCCCAGCATCAAGCGCAGCGACCCACTGGTGGTCCTGCTGGAAGTCACGCCTTCGATGCTGGC
GGCCGACGTCGCTCCCACCCGCCTCGAACAGGCCAAACGCAAGCTGCTGGACCTGCTGGAGCGGCGCCAGGACGTGCAGA
CCGCCGTAGTGGTGTTCGCCGGCAGCGCACATACCCTGGTGCCGCTGTCCGACGATCTGGCGACCACCCGCAACCTGCTG
GCGGCCGTACACCCGGCACTGATGCCCGAGCCCGGCCAACGTGCAGACCTGGCCGTTGCCAGGGGGCTCGAACTGTTGCG
TCAAGCGGGCCTCGGCCGCGGGCGGCTGCTGCTGATCGGCAGCAGTCTGGACCAGCACGAGCGCAGCGCCATTGCCACGC
TGCTGCAAGGGCAAGGCGAGCGGCTGCTGATGCTTGGCGTGGGGACCGAACAGGGTGCCCCGATTGCCGGCGAGAACGGC
AGCTTCCTCAAGGATACGAACGGCGCGATCCTGATTCCGCGGCTGGACAACGCCGGGCTGCAGCGCTTCGCAACCGAGCT
CGGCGGGCGCTACCGTCAGGCACGCCTCGGCGATGAAGACCTCGCGGCGCTGGGGCTGCTGGACCAAGCCGGCACACTGC
AGCGCGACGACGAAGTGACCCGCCTGGAGGCCTGGCTCGACCAGGGCTATTGGCTCCTGCTGCCCTTGCTCCTGCTGGCC
GCGCTGGCTGGCCGTCGCGGCTGGCTGTTCTGTCTGCCATTGCTGCTGTTGCAGCCACAACCGGCCAGCGCATTCGAATT
CGAAGACCTCTGGCTGCGCCGCGACCAGCAAGGCCAACGCCTGCTGGAGGCGGAACAACCGGCGAAGGCCGCCGAGCGCT
TCGCCGATCGGCGCTGGCAGGCGATGGCGCTATATGAGGCCGGTGACTACACCGGTGCCGCCGAACGCTTCGCCGAAGGC
AGTACGGCCGCCGACCACTACAATCGCGGCAACGCCCTGGCACGCGACGAGGCTCTGGAGGCCGCCATCGAAGCCTATGA
ACAGGCGCTGGAGCTGCAGCCCGACCTGCAAGTGGCGCAGCGCAACAAGGCATTGGTGGAGGAGCTGCTGCGCCGCCGTC
AGGAGCAGGCCGAGCCAGAGCCTGAGCAGCAGGAACAGGAACAGACGGAGCCGGACGAGCCGCAGCCACAGTCGCAACCA
CCGGAGTCCGGCTCGGCCAGCAGTCCGTCGACAGAGGACGCACAGGGCGAGCCGGCCAGCGAAGCCAGTGGCGCCCCGCA
GGCATCCACAAGCGAAGCAACGGACGAAACCGGCGAATCGCCCGCTCAGGCACAGCACGAGGGCCTGCCCGATCTGGAAC
GGCAACAGGCCACCGAACAATGGCTGCGGCAGATTCCGGACGATCCCGGCGAGCTGTTGCGGCGAAAATTTCTCTACGAA
CAACGCAAGCGCCAGGGAACCAATCGATGA

Upstream 100 bases:

>100_bases
GGCCCCTCAGCGCTGCGCTACTGATCAGCCTGCTGATGGTCGCGGCCAGTCTCTGGAGCGCGCAGCTGCAACGCCTGGCA
TGGCGACGGGAGCAACGGCG

Downstream 100 bases:

>100_bases
AGCGCCTGATGGCTTTTCTCCTGCTCTGCATCCTGGCCGGACAGGCGACCGCCGCCGGCCTGTTCGCCCGTGTGGATCGC
ACCCAGCTGAGCATCGACGA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A; TPR Domain-Containing Protein; BatB Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Aerotolerance-Related Membrane Protein; Von Willebrand Factor Type A Domain-Containing Protein; Transmembrane Protein; TPR Repeat; TPR Domain Protein In Aerotolerance Operon; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Repeat Family; Transmembrane TPR Repeat-Containing Protein; Ssl1 Domain Protein; Batb Protein; Aerotolerance-Related Cytoplasmic Membrane Protein BatB; BatB/BatC Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MSELLPHLLRPWWLAIVPLLAWLLWRLWHRQLQVGRWQRLLPEAFHAALLTRGRLRHSRLPWLVLGLAWLLAVIALLGPS
WQRFEQPSIKRSDPLVVLLEVTPSMLAADVAPTRLEQAKRKLLDLLERRQDVQTAVVVFAGSAHTLVPLSDDLATTRNLL
AAVHPALMPEPGQRADLAVARGLELLRQAGLGRGRLLLIGSSLDQHERSAIATLLQGQGERLLMLGVGTEQGAPIAGENG
SFLKDTNGAILIPRLDNAGLQRFATELGGRYRQARLGDEDLAALGLLDQAGTLQRDDEVTRLEAWLDQGYWLLLPLLLLA
ALAGRRGWLFCLPLLLLQPQPASAFEFEDLWLRRDQQGQRLLEAEQPAKAAERFADRRWQAMALYEAGDYTGAAERFAEG
STAADHYNRGNALARDEALEAAIEAYEQALELQPDLQVAQRNKALVEELLRRRQEQAEPEPEQQEQEQTEPDEPQPQSQP
PESGSASSPSTEDAQGEPASEASGAPQASTSEATDETGESPAQAQHEGLPDLERQQATEQWLRQIPDDPGELLRRKFLYE
QRKRQGTNR

Sequences:

>Translated_569_residues
MSELLPHLLRPWWLAIVPLLAWLLWRLWHRQLQVGRWQRLLPEAFHAALLTRGRLRHSRLPWLVLGLAWLLAVIALLGPS
WQRFEQPSIKRSDPLVVLLEVTPSMLAADVAPTRLEQAKRKLLDLLERRQDVQTAVVVFAGSAHTLVPLSDDLATTRNLL
AAVHPALMPEPGQRADLAVARGLELLRQAGLGRGRLLLIGSSLDQHERSAIATLLQGQGERLLMLGVGTEQGAPIAGENG
SFLKDTNGAILIPRLDNAGLQRFATELGGRYRQARLGDEDLAALGLLDQAGTLQRDDEVTRLEAWLDQGYWLLLPLLLLA
ALAGRRGWLFCLPLLLLQPQPASAFEFEDLWLRRDQQGQRLLEAEQPAKAAERFADRRWQAMALYEAGDYTGAAERFAEG
STAADHYNRGNALARDEALEAAIEAYEQALELQPDLQVAQRNKALVEELLRRRQEQAEPEPEQQEQEQTEPDEPQPQSQP
PESGSASSPSTEDAQGEPASEASGAPQASTSEATDETGESPAQAQHEGLPDLERQQATEQWLRQIPDDPGELLRRKFLYE
QRKRQGTNR
>Mature_568_residues
SELLPHLLRPWWLAIVPLLAWLLWRLWHRQLQVGRWQRLLPEAFHAALLTRGRLRHSRLPWLVLGLAWLLAVIALLGPSW
QRFEQPSIKRSDPLVVLLEVTPSMLAADVAPTRLEQAKRKLLDLLERRQDVQTAVVVFAGSAHTLVPLSDDLATTRNLLA
AVHPALMPEPGQRADLAVARGLELLRQAGLGRGRLLLIGSSLDQHERSAIATLLQGQGERLLMLGVGTEQGAPIAGENGS
FLKDTNGAILIPRLDNAGLQRFATELGGRYRQARLGDEDLAALGLLDQAGTLQRDDEVTRLEAWLDQGYWLLLPLLLLAA
LAGRRGWLFCLPLLLLQPQPASAFEFEDLWLRRDQQGQRLLEAEQPAKAAERFADRRWQAMALYEAGDYTGAAERFAEGS
TAADHYNRGNALARDEALEAAIEAYEQALELQPDLQVAQRNKALVEELLRRRQEQAEPEPEQQEQEQTEPDEPQPQSQPP
ESGSASSPSTEDAQGEPASEASGAPQASTSEATDETGESPAQAQHEGLPDLERQQATEQWLRQIPDDPGELLRRKFLYEQ
RKRQGTNR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63414; Mature: 63282

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELLPHLLRPWWLAIVPLLAWLLWRLWHRQLQVGRWQRLLPEAFHAALLTRGRLRHSRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PWLVLGLAWLLAVIALLGPSWQRFEQPSIKRSDPLVVLLEVTPSMLAADVAPTRLEQAKR
HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHHHHHH
KLLDLLERRQDVQTAVVVFAGSAHTLVPLSDDLATTRNLLAAVHPALMPEPGQRADLAVA
HHHHHHHHHHHHHHEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RGLELLRQAGLGRGRLLLIGSSLDQHERSAIATLLQGQGERLLMLGVGTEQGAPIAGENG
HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
SFLKDTNGAILIPRLDNAGLQRFATELGGRYRQARLGDEDLAALGLLDQAGTLQRDDEVT
CEEECCCCEEEEECCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHH
RLEAWLDQGYWLLLPLLLLAALAGRRGWLFCLPLLLLQPQPASAFEFEDLWLRRDQQGQR
HHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHH
LLEAEQPAKAAERFADRRWQAMALYEAGDYTGAAERFAEGSTAADHYNRGNALARDEALE
HHHHCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCHHHHCCCCCCHHHHHHHH
AAIEAYEQALELQPDLQVAQRNKALVEELLRRRQEQAEPEPEQQEQEQTEPDEPQPQSQP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCC
PESGSASSPSTEDAQGEPASEASGAPQASTSEATDETGESPAQAQHEGLPDLERQQATEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHH
WLRQIPDDPGELLRRKFLYEQRKRQGTNR
HHHHCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SELLPHLLRPWWLAIVPLLAWLLWRLWHRQLQVGRWQRLLPEAFHAALLTRGRLRHSRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PWLVLGLAWLLAVIALLGPSWQRFEQPSIKRSDPLVVLLEVTPSMLAADVAPTRLEQAKR
HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHHHHHH
KLLDLLERRQDVQTAVVVFAGSAHTLVPLSDDLATTRNLLAAVHPALMPEPGQRADLAVA
HHHHHHHHHHHHHHEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RGLELLRQAGLGRGRLLLIGSSLDQHERSAIATLLQGQGERLLMLGVGTEQGAPIAGENG
HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
SFLKDTNGAILIPRLDNAGLQRFATELGGRYRQARLGDEDLAALGLLDQAGTLQRDDEVT
CEEECCCCEEEEECCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHH
RLEAWLDQGYWLLLPLLLLAALAGRRGWLFCLPLLLLQPQPASAFEFEDLWLRRDQQGQR
HHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHH
LLEAEQPAKAAERFADRRWQAMALYEAGDYTGAAERFAEGSTAADHYNRGNALARDEALE
HHHHCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCHHHHCCCCCCHHHHHHHH
AAIEAYEQALELQPDLQVAQRNKALVEELLRRRQEQAEPEPEQQEQEQTEPDEPQPQSQP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCC
PESGSASSPSTEDAQGEPASEASGAPQASTSEATDETGESPAQAQHEGLPDLERQQATEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHH
WLRQIPDDPGELLRRKFLYEQRKRQGTNR
HHHHCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA