Click here to switch to the map view.

The map label for this gene is 146282738

Identifier: 146282738

GI number: 146282738

Start: 2618673

End: 2619692

Strand: Direct

Name: 146282738

Synonym: PST_2397

Alternate gene names: NA

Gene position: 2618673-2619692 (Clockwise)

Preceding gene: 146282737

Following gene: 146282739

Centisome position: 57.33

GC content: 67.94

Gene sequence:

>1020_bases
ATGTTTGAGTTGGCCTGGCCCTGGGTCTTCCTGCTGTTGCCGCTGCCCTGGCTGCTGCGCGCGTTGCTGCCGCCAGCCGA
TAGCGGCGAGGCCGCCCTCAAGGTCAGTTTCCTCGATGAACTGCAGCAGCTGGCCGGCCGTCGTGCGCGGGTCGCGTTGC
CCGCCTGGCGCCAGCAACTGCCCTATCTCACGGTCTGGCTGTTGCTGCTGTTCGCCGCAGCGCGCCCACAGTGGCTGGGC
GAGCCGCTGCCATTGCCCACCAGTGGCCGCGACCTGCTGCTCGCAGTGGATGTCTCCGGCTCGATGGATTACCCGGACAT
GCAGTGGCAGGGCGAGGAGCTCACCCGACTGGAACTGGTCAAGGTGCTGCTCGGCGACTTCATCGAGCAGCGCCACGGCG
ATCGGGTCGGTCTGATCCTCTTCGGCAGCAAGGCCTACCTGCAGGCGCCGCTGACCTTCGACCGACGTACCGTACGTGTC
TGGCTGGACGAGGCGCGGGTCGGCATCGCGGGCAGCAATACCGCCATCGGCGATGCCATCGGCCTTGCCGTCAAGCGCCT
GCGCGAGCGCCCGACCAACAGCCGCGTGCTGGTCTTGATTACCGATGGCGCGAACAACGGCGGCGAACTCGATCCACTGC
TGGCCGCGACACTTGCCGCAGAAGAGAGCGTGCGCATCCACACCATCGGCATTGGCGCGGTCCCGGAAGAAGGGGGCGTG
CTCAGCCGTTTCGGCTTCAACCCGGGGCTGGATCTGGACGAACCGACGCTGCGCGCCATTGCCGAGCAGACCGGCGGCGA
ATACTTCCGCGCCGCGTCCAGCGCCGAGCTCAAGGCCATCGGCGCAGCGCTGGACCGCCTCGAGCCTGCCGCGCAGCAGC
CGACCCAGGCACGCCTGGCCGAAGCGCTTTACATCTGGCCCCTCAGCGCTGCGCTACTGATCAGCCTGCTGATGGTCGCG
GCCAGTCTCTGGAGCGCGCAGCTGCAACGCCTGGCATGGCGACGGGAGCAACGGCGATGA

Upstream 100 bases:

>100_bases
TGGATGGTCCTCGTCGAAGGCGCCTATCGGGCCGAATGCCGCCTCGACGACAAGGCCATCGACGGCCTCGAGCAATCCGT
CGACATCTGGATTCGCAAAC

Downstream 100 bases:

>100_bases
GCGAGCTGCTGCCCCACCTGCTTCGCCCCTGGTGGCTGGCCATCGTGCCGCTGCTGGCCTGGCTGCTCTGGCGCCTCTGG
CATCGGCAACTGCAGGTCGG

Product: von Willebrand factor type A domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MFELAWPWVFLLLPLPWLLRALLPPADSGEAALKVSFLDELQQLAGRRARVALPAWRQQLPYLTVWLLLLFAAARPQWLG
EPLPLPTSGRDLLLAVDVSGSMDYPDMQWQGEELTRLELVKVLLGDFIEQRHGDRVGLILFGSKAYLQAPLTFDRRTVRV
WLDEARVGIAGSNTAIGDAIGLAVKRLRERPTNSRVLVLITDGANNGGELDPLLAATLAAEESVRIHTIGIGAVPEEGGV
LSRFGFNPGLDLDEPTLRAIAEQTGGEYFRAASSAELKAIGAALDRLEPAAQQPTQARLAEALYIWPLSAALLISLLMVA
ASLWSAQLQRLAWRREQRR

Sequences:

>Translated_339_residues
MFELAWPWVFLLLPLPWLLRALLPPADSGEAALKVSFLDELQQLAGRRARVALPAWRQQLPYLTVWLLLLFAAARPQWLG
EPLPLPTSGRDLLLAVDVSGSMDYPDMQWQGEELTRLELVKVLLGDFIEQRHGDRVGLILFGSKAYLQAPLTFDRRTVRV
WLDEARVGIAGSNTAIGDAIGLAVKRLRERPTNSRVLVLITDGANNGGELDPLLAATLAAEESVRIHTIGIGAVPEEGGV
LSRFGFNPGLDLDEPTLRAIAEQTGGEYFRAASSAELKAIGAALDRLEPAAQQPTQARLAEALYIWPLSAALLISLLMVA
ASLWSAQLQRLAWRREQRR
>Mature_339_residues
MFELAWPWVFLLLPLPWLLRALLPPADSGEAALKVSFLDELQQLAGRRARVALPAWRQQLPYLTVWLLLLFAAARPQWLG
EPLPLPTSGRDLLLAVDVSGSMDYPDMQWQGEELTRLELVKVLLGDFIEQRHGDRVGLILFGSKAYLQAPLTFDRRTVRV
WLDEARVGIAGSNTAIGDAIGLAVKRLRERPTNSRVLVLITDGANNGGELDPLLAATLAAEESVRIHTIGIGAVPEEGGV
LSRFGFNPGLDLDEPTLRAIAEQTGGEYFRAASSAELKAIGAALDRLEPAAQQPTQARLAEALYIWPLSAALLISLLMVA
ASLWSAQLQRLAWRREQRR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 37313; Mature: 37313

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFELAWPWVFLLLPLPWLLRALLPPADSGEAALKVSFLDELQQLAGRRARVALPAWRQQL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCEEECHHHHHHC
PYLTVWLLLLFAAARPQWLGEPLPLPTSGRDLLLAVDVSGSMDYPDMQWQGEELTRLELV
CHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH
KVLLGDFIEQRHGDRVGLILFGSKAYLQAPLTFDRRTVRVWLDEARVGIAGSNTAIGDAI
HHHHHHHHHHHCCCEEEEEEECCHHHEECCCCCCCEEEEEEEECCCEEECCCCCCHHHHH
GLAVKRLRERPTNSRVLVLITDGANNGGELDPLLAATLAAEESVRIHTIGIGAVPEEGGV
HHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCE
LSRFGFNPGLDLDEPTLRAIAEQTGGEYFRAASSAELKAIGAALDRLEPAAQQPTQARLA
EEECCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCHHHCCCHHHHHH
EALYIWPLSAALLISLLMVAASLWSAQLQRLAWRREQRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFELAWPWVFLLLPLPWLLRALLPPADSGEAALKVSFLDELQQLAGRRARVALPAWRQQL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCEEECHHHHHHC
PYLTVWLLLLFAAARPQWLGEPLPLPTSGRDLLLAVDVSGSMDYPDMQWQGEELTRLELV
CHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH
KVLLGDFIEQRHGDRVGLILFGSKAYLQAPLTFDRRTVRVWLDEARVGIAGSNTAIGDAI
HHHHHHHHHHHCCCEEEEEEECCHHHEECCCCCCCEEEEEEEECCCEEECCCCCCHHHHH
GLAVKRLRERPTNSRVLVLITDGANNGGELDPLLAATLAAEESVRIHTIGIGAVPEEGGV
HHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCE
LSRFGFNPGLDLDEPTLRAIAEQTGGEYFRAASSAELKAIGAALDRLEPAAQQPTQARLA
EEECCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCHHHCCCHHHHHH
EALYIWPLSAALLISLLMVAASLWSAQLQRLAWRREQRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]