| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
Click here to switch to the map view.
The map label for this gene is rmf [C]
Identifier: 146282730
GI number: 146282730
Start: 2608337
End: 2608552
Strand: Direct
Name: rmf [C]
Synonym: PST_2389
Alternate gene names: 146282730
Gene position: 2608337-2608552 (Clockwise)
Preceding gene: 146282728
Following gene: 146282733
Centisome position: 57.11
GC content: 58.33
Gene sequence:
>216_bases ATGAGAAGACTCAAGCGTGATCCGATGGAACGAGCATTTCTGCGCGGTTATCAACATGGCATACATGGCAAATCTCGCGA CCTCTGTCCCTTCTCCCATCCCCAAGTTCGCCAAGCCTGGATCAACGGCTGGCGGGAGGGTCGCGGCGACAACTGGGATG GTCTGACCGGCACGGCCGGTCTGCATAGACTCAACGAACTTCACGCGGTCGGCTGA
Upstream 100 bases:
>100_bases AGGCGCGCCACGCCGGCAGCGCGCCTCAATCGGCAGTCTATCTGCCCGGTCTCGCCATGAGGCCACAGGAACACCAGTCA ACCACTGAGGGCAATACCCA
Downstream 100 bases:
>100_bases TTTACCGATCCACCCGACTTGATACGGCACGCCCTACCCGGGCGGCGGGCTAGAAGCCCAGGGGCTCCAAACAGGAGCCC CTTCCCACCACCTACTTCGC
Product: ribosome modulation factor-related protein
Products: NA
Alternate protein names: Ribosome Modulation Factor-Related Protein
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MRRLKRDPMERAFLRGYQHGIHGKSRDLCPFSHPQVRQAWINGWREGRGDNWDGLTGTAGLHRLNELHAVG
Sequences:
>Translated_71_residues MRRLKRDPMERAFLRGYQHGIHGKSRDLCPFSHPQVRQAWINGWREGRGDNWDGLTGTAGLHRLNELHAVG >Mature_71_residues MRRLKRDPMERAFLRGYQHGIHGKSRDLCPFSHPQVRQAWINGWREGRGDNWDGLTGTAGLHRLNELHAVG
Specific function: Associates With 70s Ribosomes And Converts Them To A Dimeric Form (100s Ribosomes) Which Appear During The Transition From The Exponential Growth Phase To The Stationary Phase Of Escherichia Coli Cells. [C]
COG id: COG3130
COG function: function code J; Ribosome modulation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8217; Mature: 8217
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLKRDPMERAFLRGYQHGIHGKSRDLCPFSHPQVRQAWINGWREGRGDNWDGLTGTAG CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH LHRLNELHAVG HHHHHHHHCCC >Mature Secondary Structure MRRLKRDPMERAFLRGYQHGIHGKSRDLCPFSHPQVRQAWINGWREGRGDNWDGLTGTAG CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH LHRLNELHAVG HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA