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The map label for this gene is yfgB [C]

Identifier: 146282579

GI number: 146282579

Start: 2435264

End: 2436292

Strand: Direct

Name: yfgB [C]

Synonym: PST_2231

Alternate gene names: 146282579

Gene position: 2435264-2436292 (Clockwise)

Preceding gene: 146282578

Following gene: 146282580

Centisome position: 53.32

GC content: 67.54

Gene sequence:

>1029_bases
ATGCGCATCCCCGACTTCCAGCAACGCCTCGCCGACATCGGCGCCAAGCCCCGTCATATCGGACGGATGACCCGCGCCTG
GCTCAAGGGCCTGCCGCTCGATGTCGGGCGGCGCCAGCAGCAGGCCGAGGACTTCCTGCCGCTGAGCGTGCGCGAAGGTC
TGCCGGCGCTGAGCCTGGAAATCGATGCACTGGCCCGCCTGCGCTCCGAGCACCCGGCCGCCGATGGTTCGGCAAGACTG
CTGGTGGAGCTTGGCGATGGGCAGATGGTGGAAAGCGTGCTGCTGCCGCGCGACGGGCTGTGCGTGTCCAGCCAGGTCGG
CTGCGCGGTGGGCTGCGTGTTCTGCATGACCGGCAAGAGCGGCCTGCTGCGCCAGCTGGGCAGTGCCGAAATCGTTGCTC
AGGTCGCCCTCGCCCGCCGCTTCCGCCCGGTGAAGAAGGTGGTGTTCATGGGCATGGGCGAGCCGGCGCACAACCTCGAC
AACGTACTCGAGGCGATCGACCTGCTCGGTACGGAGGGCGGCATCGGTCACAAGAACCTGGTGTTTTCCACCGTCGGAGA
CTTGCGCGTGTTCGAGCGCCTGCCACAGCAACGGGTCAAGCCGGCCCTGGCGCTATCGCTGCACAGTACCGACGGTGCCT
TGCGCCAGGCGCTGCTGCCGCGCGCACCGCAGATCGCCCCGGAGGAACTGGTCGAGCTTGGCGAGACCTACGCCCGCGCG
ACAGGCTTCCCGATCCAGTATCAGTGGACGCTGCTCAAGGGCATCAACGACAACCAGGAGGAGATGGACGGTATCCTGCG
CCTGCTCAAGGGCAAGTATGCGGTGATGAACCTGATCCCCTACAACAGCCTGGAAGACGACGCGTACCAGCGGCCTGAGG
GTGAGCGCATCGTGCAGATCGTGCGCTATCTGCACAGCCGCGGCGTGCTGACCAAGGTGCGCAATTCGGCCGGCCAGGAT
ATCGATGGCGGCTGCGGCCAGCTGCGCGCCCGCGCCGAGCACGTGCTCGGACGCAGGCGGCCGCGCTGA

Upstream 100 bases:

>100_bases
TCGCTGGGCATGGCCTTCGCACTGCTCGCCGTCCTGCTGCTCGGTATCGTGCCGTTCTGCCGTCGCTTCGCGGCGTGAGC
CCGGCTAGAATGCGCGCCCT

Downstream 100 bases:

>100_bases
TCGGGCCTGAACCCACCTCGCCAACGGCTGTCGGAGCGCTGTAGCAGACGCCGTTTCGGTGTTCATCTCAGCAAGGAAAG
CGCAACACCGCATGCATACC

Product: ribosomal RNA large subunit methyltransferase N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRIPDFQQRLADIGAKPRHIGRMTRAWLKGLPLDVGRRQQQAEDFLPLSVREGLPALSLEIDALARLRSEHPAADGSARL
LVELGDGQMVESVLLPRDGLCVSSQVGCAVGCVFCMTGKSGLLRQLGSAEIVAQVALARRFRPVKKVVFMGMGEPAHNLD
NVLEAIDLLGTEGGIGHKNLVFSTVGDLRVFERLPQQRVKPALALSLHSTDGALRQALLPRAPQIAPEELVELGETYARA
TGFPIQYQWTLLKGINDNQEEMDGILRLLKGKYAVMNLIPYNSLEDDAYQRPEGERIVQIVRYLHSRGVLTKVRNSAGQD
IDGGCGQLRARAEHVLGRRRPR

Sequences:

>Translated_342_residues
MRIPDFQQRLADIGAKPRHIGRMTRAWLKGLPLDVGRRQQQAEDFLPLSVREGLPALSLEIDALARLRSEHPAADGSARL
LVELGDGQMVESVLLPRDGLCVSSQVGCAVGCVFCMTGKSGLLRQLGSAEIVAQVALARRFRPVKKVVFMGMGEPAHNLD
NVLEAIDLLGTEGGIGHKNLVFSTVGDLRVFERLPQQRVKPALALSLHSTDGALRQALLPRAPQIAPEELVELGETYARA
TGFPIQYQWTLLKGINDNQEEMDGILRLLKGKYAVMNLIPYNSLEDDAYQRPEGERIVQIVRYLHSRGVLTKVRNSAGQD
IDGGCGQLRARAEHVLGRRRPR
>Mature_342_residues
MRIPDFQQRLADIGAKPRHIGRMTRAWLKGLPLDVGRRQQQAEDFLPLSVREGLPALSLEIDALARLRSEHPAADGSARL
LVELGDGQMVESVLLPRDGLCVSSQVGCAVGCVFCMTGKSGLLRQLGSAEIVAQVALARRFRPVKKVVFMGMGEPAHNLD
NVLEAIDLLGTEGGIGHKNLVFSTVGDLRVFERLPQQRVKPALALSLHSTDGALRQALLPRAPQIAPEELVELGETYARA
TGFPIQYQWTLLKGINDNQEEMDGILRLLKGKYAVMNLIPYNSLEDDAYQRPEGERIVQIVRYLHSRGVLTKVRNSAGQD
IDGGCGQLRARAEHVLGRRRPR

Specific function: Unknown

COG id: COG0820

COG function: function code R; Predicted Fe-S-cluster redox enzyme

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. RlmN family

Homologues:

Organism=Escherichia coli, GI1788865, Length=276, Percent_Identity=34.4202898550725, Blast_Score=152, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2231_PSEU5 (A4VLN9)

Other databases:

- EMBL:   CP000304
- RefSeq:   YP_001172732.1
- STRING:   A4VLN9
- GeneID:   5098311
- GenomeReviews:   CP000304_GR
- KEGG:   psa:PST_2231
- eggNOG:   COG0820
- HOGENOM:   HBG335345
- OMA:   GGCGQLR
- ProtClustDB:   PRK14464
- BioCyc:   PSTU379731:PST_2231-MONOMER
- GO:   GO:0005737
- InterPro:   IPR007197
- InterPro:   IPR004383
- PIRSF:   PIRSF006004

Pfam domain/function: PF04055 Radical_SAM

EC number: NA

Molecular weight: Translated: 37681; Mature: 37681

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPDFQQRLADIGAKPRHIGRMTRAWLKGLPLDVGRRQQQAEDFLPLSVREGLPALSLE
CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHCCCCCCHHH
IDALARLRSEHPAADGSARLLVELGDGQMVESVLLPRDGLCVSSQVGCAVGCVFCMTGKS
HHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCH
GLLRQLGSAEIVAQVALARRFRPVKKVVFMGMGEPAHNLDNVLEAIDLLGTEGGIGHKNL
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHH
VFSTVGDLRVFERLPQQRVKPALALSLHSTDGALRQALLPRAPQIAPEELVELGETYARA
HHHHHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TGFPIQYQWTLLKGINDNQEEMDGILRLLKGKYAVMNLIPYNSLEDDAYQRPEGERIVQI
CCCCEEEEEHEECCCCCCHHHHHHHHHHHHCCHHHHEECCCCCCCCHHHCCCCHHHHHHH
VRYLHSRGVLTKVRNSAGQDIDGGCGQLRARAEHVLGRRRPR
HHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIPDFQQRLADIGAKPRHIGRMTRAWLKGLPLDVGRRQQQAEDFLPLSVREGLPALSLE
CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHCCCCCCHHH
IDALARLRSEHPAADGSARLLVELGDGQMVESVLLPRDGLCVSSQVGCAVGCVFCMTGKS
HHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCH
GLLRQLGSAEIVAQVALARRFRPVKKVVFMGMGEPAHNLDNVLEAIDLLGTEGGIGHKNL
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHH
VFSTVGDLRVFERLPQQRVKPALALSLHSTDGALRQALLPRAPQIAPEELVELGETYARA
HHHHHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TGFPIQYQWTLLKGINDNQEEMDGILRLLKGKYAVMNLIPYNSLEDDAYQRPEGERIVQI
CCCCEEEEEHEECCCCCCHHHHHHHHHHHHCCHHHHEECCCCCCCCHHHCCCCHHHHHHH
VRYLHSRGVLTKVRNSAGQDIDGGCGQLRARAEHVLGRRRPR
HHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA