| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145301156
Identifier: 145301156
GI number: 145301156
Start: 4634521
End: 4635972
Strand: Direct
Name: 145301156
Synonym: ASA_4333
Alternate gene names: NA
Gene position: 4634521-4635972 (Clockwise)
Preceding gene: 145301155
Following gene: 145301157
Centisome position: 98.56
GC content: 44.08
Gene sequence:
>1452_bases ATGAAAGTCAATAATTTGCATATTCGCTCTCGCTTTAAAAACCTTGAAAACGTGAAGGTGGACTTTGACGAAAACCACCT GATGACAGTCGTGGTAGGCCGAAATGGTTCGGGTAAATCCAACGTACTGGAAGCCTTAGTGGCGATTTTTCGCAACCTTG ACTTGGGAGATGCACCACCGTTCTCATACGAGTTGATTTATCGACTTGGCGAGCCTCACAAGCAAAATAAGCCCAGTGAA CGGTGGCTGGAAATCACTATTGATGCAGACCCAACTCGTGGCACAATCGCAAAGCAATACCAAGTACAAGTGCGAGACTT ATTAGCAGATAACGAACTTAATAATACATCCACCAATAAACCTTCAGGTGAAACCATTCCGTTTTCAAAAGTGAAACGCG ACAAAGAAGGTAAAGCCCCGTACCTACCTAACTATGTGTTTGCCTATTATTCAGGCCCTAGCGATCGTTTGGAAAATAAC TTTAAGAAACATCGCACAAATTTTTACCGTCGGCTACTTGAGGATAAGTTGGATCTAAAAGGCGACATTAGGCCTTTGTT CTATGCCAAGCCACACCACAGCCAATTTGTGCTATTAGCATTTTTCTTATCAGAACAAGACAGCGTAGAAAAAGCATTTT TGCGCGAACACCTAGGCATTAAAGACTTAGACAGCATTCACTTTGTGATGCGGCAACCAGGATGGGCAAAACAGAAAGGA GAATTATTCTGGGGAGCGAAAGGAGTTGTTCGTCGTTTTTTAGATGAGCTAATCAAGCACACGCTGTCCCCCGTTAAAGT GACACGTCCGGAAGATACTTCGTTAACGAATAGTAATATTAGCAAAGAGTTCTTCCATTTGTTTTTACCCGATGTAAAGG CACTACGCGAGTTTGCCAAAGACCTCAATCCTGACGAGCTGTTTAAAATGCTCGAAAGTACGTTACTTTCGGAGATTATT TCTGGAGTCAGCATTCGAGTTAAAGTGTCCAGCAGCAAGGAGCCACTGACTTTCAGAGAGCTCAGCGAAGGTGAACAACA ACTACTTACTGTATTAGGTTTGCTCAAATTCACTGGAGGAAAAGACTCATTGTTTTTACTCGATGAACCCGACACTCACC TCAACCCATCATGGGCAGTGAAGTATTTGAAGTTCCTCCGTGAGTTCGTACCAAACCATGAAACCAGCCATTTGTTGATG GTGACTCATCATCCACTCGCTATTGCTGAGTTGAAGAAAGAGCAGGTACAGGTCATGTGGCGCGATTCTAACTTTCAGGT TCATGCACAAGAGCCGGAAGAAAGCCCCAGAGGCATGGGGTATGGTGGAATACTCACTAGCGATATGTTTGGTTTGCTCA CAACTCTGGACAATTCAACAGAACGTTTGCTGCGATTGCGTCGGCGTTTTACCGAAAAACGGAGTTATCGCCCATACAGA GTAGGCGTTTGA
Upstream 100 bases:
>100_bases AAAATCCATTGTAAAGCTTGAGCGAGGTGATGACGGTCAGGATTGGTTTGCCTTGGCTAAAACAGTCGAGACGAACAAAG CATAGCGCTAAGGACAGCAC
Downstream 100 bases:
>100_bases GAAAAATTGATAAGGCTATAGAGGGGCTGGGGTTCACAACCGCTCATTGGGATGAGGAGTATGCACAATATTTGCGTATG CGTAGAGAGGTGGAGAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; SMC Protein N-Terminal Domain-Containing Protein; AAA ATPase
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MKVNNLHIRSRFKNLENVKVDFDENHLMTVVVGRNGSGKSNVLEALVAIFRNLDLGDAPPFSYELIYRLGEPHKQNKPSE RWLEITIDADPTRGTIAKQYQVQVRDLLADNELNNTSTNKPSGETIPFSKVKRDKEGKAPYLPNYVFAYYSGPSDRLENN FKKHRTNFYRRLLEDKLDLKGDIRPLFYAKPHHSQFVLLAFFLSEQDSVEKAFLREHLGIKDLDSIHFVMRQPGWAKQKG ELFWGAKGVVRRFLDELIKHTLSPVKVTRPEDTSLTNSNISKEFFHLFLPDVKALREFAKDLNPDELFKMLESTLLSEII SGVSIRVKVSSSKEPLTFRELSEGEQQLLTVLGLLKFTGGKDSLFLLDEPDTHLNPSWAVKYLKFLREFVPNHETSHLLM VTHHPLAIAELKKEQVQVMWRDSNFQVHAQEPEESPRGMGYGGILTSDMFGLLTTLDNSTERLLRLRRRFTEKRSYRPYR VGV
Sequences:
>Translated_483_residues MKVNNLHIRSRFKNLENVKVDFDENHLMTVVVGRNGSGKSNVLEALVAIFRNLDLGDAPPFSYELIYRLGEPHKQNKPSE RWLEITIDADPTRGTIAKQYQVQVRDLLADNELNNTSTNKPSGETIPFSKVKRDKEGKAPYLPNYVFAYYSGPSDRLENN FKKHRTNFYRRLLEDKLDLKGDIRPLFYAKPHHSQFVLLAFFLSEQDSVEKAFLREHLGIKDLDSIHFVMRQPGWAKQKG ELFWGAKGVVRRFLDELIKHTLSPVKVTRPEDTSLTNSNISKEFFHLFLPDVKALREFAKDLNPDELFKMLESTLLSEII SGVSIRVKVSSSKEPLTFRELSEGEQQLLTVLGLLKFTGGKDSLFLLDEPDTHLNPSWAVKYLKFLREFVPNHETSHLLM VTHHPLAIAELKKEQVQVMWRDSNFQVHAQEPEESPRGMGYGGILTSDMFGLLTTLDNSTERLLRLRRRFTEKRSYRPYR VGV >Mature_483_residues MKVNNLHIRSRFKNLENVKVDFDENHLMTVVVGRNGSGKSNVLEALVAIFRNLDLGDAPPFSYELIYRLGEPHKQNKPSE RWLEITIDADPTRGTIAKQYQVQVRDLLADNELNNTSTNKPSGETIPFSKVKRDKEGKAPYLPNYVFAYYSGPSDRLENN FKKHRTNFYRRLLEDKLDLKGDIRPLFYAKPHHSQFVLLAFFLSEQDSVEKAFLREHLGIKDLDSIHFVMRQPGWAKQKG ELFWGAKGVVRRFLDELIKHTLSPVKVTRPEDTSLTNSNISKEFFHLFLPDVKALREFAKDLNPDELFKMLESTLLSEII SGVSIRVKVSSSKEPLTFRELSEGEQQLLTVLGLLKFTGGKDSLFLLDEPDTHLNPSWAVKYLKFLREFVPNHETSHLLM VTHHPLAIAELKKEQVQVMWRDSNFQVHAQEPEESPRGMGYGGILTSDMFGLLTTLDNSTERLLRLRRRFTEKRSYRPYR VGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55771; Mature: 55771
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVNNLHIRSRFKNLENVKVDFDENHLMTVVVGRNGSGKSNVLEALVAIFRNLDLGDAPP CCCCCCHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCC FSYELIYRLGEPHKQNKPSERWLEITIDADPTRGTIAKQYQVQVRDLLADNELNNTSTNK CHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC PSGETIPFSKVKRDKEGKAPYLPNYVFAYYSGPSDRLENNFKKHRTNFYRRLLEDKLDLK CCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GDIRPLFYAKPHHSQFVLLAFFLSEQDSVEKAFLREHLGIKDLDSIHFVMRQPGWAKQKG CCCCEEEEECCCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC ELFWGAKGVVRRFLDELIKHTLSPVKVTRPEDTSLTNSNISKEFFHLFLPDVKALREFAK CEEECHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH DLNPDELFKMLESTLLSEIISGVSIRVKVSSSKEPLTFRELSEGEQQLLTVLGLLKFTGG CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC KDSLFLLDEPDTHLNPSWAVKYLKFLREFVPNHETSHLLMVTHHPLAIAELKKEQVQVMW CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHEEEEE RDSNFQVHAQEPEESPRGMGYGGILTSDMFGLLTTLDNSTERLLRLRRRFTEKRSYRPYR ECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEE VGV CCC >Mature Secondary Structure MKVNNLHIRSRFKNLENVKVDFDENHLMTVVVGRNGSGKSNVLEALVAIFRNLDLGDAPP CCCCCCHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCC FSYELIYRLGEPHKQNKPSERWLEITIDADPTRGTIAKQYQVQVRDLLADNELNNTSTNK CHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC PSGETIPFSKVKRDKEGKAPYLPNYVFAYYSGPSDRLENNFKKHRTNFYRRLLEDKLDLK CCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GDIRPLFYAKPHHSQFVLLAFFLSEQDSVEKAFLREHLGIKDLDSIHFVMRQPGWAKQKG CCCCEEEEECCCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC ELFWGAKGVVRRFLDELIKHTLSPVKVTRPEDTSLTNSNISKEFFHLFLPDVKALREFAK CEEECHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH DLNPDELFKMLESTLLSEIISGVSIRVKVSSSKEPLTFRELSEGEQQLLTVLGLLKFTGG CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC KDSLFLLDEPDTHLNPSWAVKYLKFLREFVPNHETSHLLMVTHHPLAIAELKKEQVQVMW CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHEEEEE RDSNFQVHAQEPEESPRGMGYGGILTSDMFGLLTTLDNSTERLLRLRRRFTEKRSYRPYR ECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEE VGV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA