| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145301157
Identifier: 145301157
GI number: 145301157
Start: 4636178
End: 4637041
Strand: Direct
Name: 145301157
Synonym: ASA_4334
Alternate gene names: NA
Gene position: 4636178-4637041 (Clockwise)
Preceding gene: 145301156
Following gene: 145301166
Centisome position: 98.59
GC content: 43.63
Gene sequence:
>864_bases ATGAGACACTTAGACATTGATTTCACAAAGCTTGTTCTACCGCAAGGCTGGCGAGAAAAAACTAAGGAACTTTCAGATTC ACTCATAGCCGCGCAAGACGAAAAGCAACGGTCTGAGATCATAAATAAAAATCAAGATCACTGGAAAGCCGTTAAACCAA TATTGGCATCTTTGTTCAACCATAAATGCTGGTACACAGAAGCGCCTCAGCAAGGTACGGATGTAGATATCGACCATTTT CGGCCCAAAAAGCGTGTGCAAGAAACACTATCAACGGCAAAACAGCATGACGGTTACTGGTGGTTAGCATTCAACCTTCA AAATTATCGTTACAGCTGCATTGTCGCGAACCGTCGACGAACCGATGTGGAGACTGGAGTGACTGGCGGTAAAGCTGATC ATTTTCCACTATGCGATGAAAGCATGCGAGCGAGGACCCCAAGTTGCGATCTAGAGGCTGAACAACCAATACTGCTAGAT CCATTAAAGGCTACCGACGTACAGTTGCTATACTTCAAACCAGACGGTGAAGCAATGCCTCGGTTTTCTGAAAAAAACCA TGCTCGCAAGTTTATGCGCGCGGACCAATCCATTATATTTTATAGCCTTAATCATTCAGATTTTGTTCGCTGCCGCATAG AATTACGCGACAAGATTGATAGTGACGTCAAAGCTGCAAAGAGATACTTCAATAAGTTGGAGACAGGGGATGCAGACAAC GACCTCGCGTATGAACAAGCAATTTGCCGCTTACGAAAAATGCGCAGCAAAGAAGCTCCATTCTCCAGTTTTTGTATAGC TTACTTGGATGGTTTCAGGCATAAACCAGAATATGAAGGCGTATTGGATGCAGTTTTTTTATAA
Upstream 100 bases:
>100_bases AAGCCGTTACCGTAACACCAGAACTTAAACATGTTCGAAAAGAGCGAGCCAAAGAGATCGTTCAGCGTATGCTGGCTGCC GAACAGGGAGAAGACAACAA
Downstream 100 bases:
>100_bases TTTTAAGTCAATTAAAAACATAGAATGATGGTTCTGGATATTTTGACCACCGTTATTGTTTACTAGTTCGGGCCTGCTCA CGTCAGAAATCAGGTTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MRHLDIDFTKLVLPQGWREKTKELSDSLIAAQDEKQRSEIINKNQDHWKAVKPILASLFNHKCWYTEAPQQGTDVDIDHF RPKKRVQETLSTAKQHDGYWWLAFNLQNYRYSCIVANRRRTDVETGVTGGKADHFPLCDESMRARTPSCDLEAEQPILLD PLKATDVQLLYFKPDGEAMPRFSEKNHARKFMRADQSIIFYSLNHSDFVRCRIELRDKIDSDVKAAKRYFNKLETGDADN DLAYEQAICRLRKMRSKEAPFSSFCIAYLDGFRHKPEYEGVLDAVFL
Sequences:
>Translated_287_residues MRHLDIDFTKLVLPQGWREKTKELSDSLIAAQDEKQRSEIINKNQDHWKAVKPILASLFNHKCWYTEAPQQGTDVDIDHF RPKKRVQETLSTAKQHDGYWWLAFNLQNYRYSCIVANRRRTDVETGVTGGKADHFPLCDESMRARTPSCDLEAEQPILLD PLKATDVQLLYFKPDGEAMPRFSEKNHARKFMRADQSIIFYSLNHSDFVRCRIELRDKIDSDVKAAKRYFNKLETGDADN DLAYEQAICRLRKMRSKEAPFSSFCIAYLDGFRHKPEYEGVLDAVFL >Mature_287_residues MRHLDIDFTKLVLPQGWREKTKELSDSLIAAQDEKQRSEIINKNQDHWKAVKPILASLFNHKCWYTEAPQQGTDVDIDHF RPKKRVQETLSTAKQHDGYWWLAFNLQNYRYSCIVANRRRTDVETGVTGGKADHFPLCDESMRARTPSCDLEAEQPILLD PLKATDVQLLYFKPDGEAMPRFSEKNHARKFMRADQSIIFYSLNHSDFVRCRIELRDKIDSDVKAAKRYFNKLETGDADN DLAYEQAICRLRKMRSKEAPFSSFCIAYLDGFRHKPEYEGVLDAVFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33488; Mature: 33488
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHLDIDFTKLVLPQGWREKTKELSDSLIAAQDEKQRSEIINKNQDHWKAVKPILASLFN CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHC HKCWYTEAPQQGTDVDIDHFRPKKRVQETLSTAKQHDGYWWLAFNLQNYRYSCIVANRRR CCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEECCCC TDVETGVTGGKADHFPLCDESMRARTPSCDLEAEQPILLDPLKATDVQLLYFKPDGEAMP CCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCC RFSEKNHARKFMRADQSIIFYSLNHSDFVRCRIELRDKIDSDVKAAKRYFNKLETGDADN CCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEHHHHCCHHHHHHHHHHHHHCCCCCCC DLAYEQAICRLRKMRSKEAPFSSFCIAYLDGFRHKPEYEGVLDAVFL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MRHLDIDFTKLVLPQGWREKTKELSDSLIAAQDEKQRSEIINKNQDHWKAVKPILASLFN CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHC HKCWYTEAPQQGTDVDIDHFRPKKRVQETLSTAKQHDGYWWLAFNLQNYRYSCIVANRRR CCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEECCCC TDVETGVTGGKADHFPLCDESMRARTPSCDLEAEQPILLDPLKATDVQLLYFKPDGEAMP CCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCC RFSEKNHARKFMRADQSIIFYSLNHSDFVRCRIELRDKIDSDVKAAKRYFNKLETGDADN CCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEHHHHCCHHHHHHHHHHHHHCCCCCCC DLAYEQAICRLRKMRSKEAPFSSFCIAYLDGFRHKPEYEGVLDAVFL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA