| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is ulaA [H]
Identifier: 145301053
GI number: 145301053
Start: 4510751
End: 4512007
Strand: Direct
Name: ulaA [H]
Synonym: ASA_4218
Alternate gene names: 145301053
Gene position: 4510751-4512007 (Clockwise)
Preceding gene: 145301052
Following gene: 145301056
Centisome position: 95.92
GC content: 61.81
Gene sequence:
>1257_bases ATGGAATTTTTCAATTTTCTGATGTTTGACGTGCTGTCCGAGCCGGCCGTGCTGGTCGGCCTGATCGCGCTCATCGGCCT GATTGCCCAGAAGAAACCCGTGACCGAGTGCATCAAGGGCACGGTCAAGACCATAATGGGCTTCGTCATCCTGGGGGCCG GTGCCACTCTGGTGGTGAACTCGCTGGGCGATTTTGCCACCATCTTCCAGCACGCCTTCGGCATCAAGGGCGTGGTTCCC AACAATGAAGCCATCGTCTCCATCGCCCAGCAGTCGTTCGGCAAGGAGATGGCGATGATCATGTTCTTCGCCATGCTGGT GAACATACTGATCGCCCGCCTCACCCCGTGGAAATTCATCTTCCTGACCGGTCACCACACCCTCTTCATGTCCATGATGG TGGCGGCGATCCTCTCCGCCGGCGGCATGAGCGGCATTCCGCTGATCGCGGTCGGCAGCCTGGTGGTCGGCGTGACCATG GTGCTGTTCCCGGCCCTCGCTCACCCCTACATGAAGCAGATCACCGGCTCCGACGAGGTGGCACTCGGCCACTTCTCCAC CATCTCCTACGTGCTGGCCGGCTGGATCGGCGCCAAGTTCGGCAACAAGGCCCACAGCAGTGAAGAGGTGCAGGTGCCCA AGAGCCTGCTGTTCCTGCGCGATACCCCTGTGGCCATCTCCTTCACCATGGGCATCATTTTCCTCATCACCTCCGCCTTT GCCGGGCCCGAATTCGTCACCAGCGTAGCAAAGGGCAAGCACTGGTTCATGTTCTCCCTGATGCAGTCCATCACCTTCGC CGCCGGTGTCTACGTCATCCTGCAGGGTGTGCGCATGGTCATCGCCGAAATCGTGCCAGCCTTCAAGGGGATCTCCGACA AGCTGGTGCCCAACGCCAAGCCGGCGCTGGACTGCCCCATCGTCTTCCCCTACGCCCCCAATGCGGTGCTGATCGGCTTC CTGTCGAGCTTTGCCGCCGGTCTGGTGGGCATGGTGCTGCTCTACCTGCTGGGGCTCACCGTCATCATACCGGGCGTGGT ACCGCACTTCTTCGTCGGCGCAGCGGCCGGGGTATTCGGCAACGCCACCGGTGGTCGCCGCGGGGCCCTGCTCGGCGCCT TCGCCAACGGCCTGCTGATCACCTTCCTGCCGGTATTTCTGCTGCCAGTGCTGGGGGATCTCGGCTTCGCCAACACCACC TTCAGCGATGCCGACTTCGGCGTGGTGGGCATACTGCTCGGCCTGATAATGCGTTGA
Upstream 100 bases:
>100_bases TGAAAGAGAAACTCTCCATCGCCCTGCGCGAACTGGGCGCTCTCTGACCACCTGACTTCGCGGCCTGCGGGCCGCCTTTT CCATCTGATTGGAGCTGACC
Downstream 100 bases:
>100_bases CCGATGCCTGTACGGAAAACAAAAACGGAGCGCCTGGCGCTCCGTTCTTTATGGCCACTCTGGGCTCAATCGCTTTCCAG ACTGGCAAGACAGTGAGAGA
Product: PTS system ascorbate-specific transporter subunit IIC
Products: NA
Alternate protein names: Ascorbate-specific PTS system EIIC component [H]
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MEFFNFLMFDVLSEPAVLVGLIALIGLIAQKKPVTECIKGTVKTIMGFVILGAGATLVVNSLGDFATIFQHAFGIKGVVP NNEAIVSIAQQSFGKEMAMIMFFAMLVNILIARLTPWKFIFLTGHHTLFMSMMVAAILSAGGMSGIPLIAVGSLVVGVTM VLFPALAHPYMKQITGSDEVALGHFSTISYVLAGWIGAKFGNKAHSSEEVQVPKSLLFLRDTPVAISFTMGIIFLITSAF AGPEFVTSVAKGKHWFMFSLMQSITFAAGVYVILQGVRMVIAEIVPAFKGISDKLVPNAKPALDCPIVFPYAPNAVLIGF LSSFAAGLVGMVLLYLLGLTVIIPGVVPHFFVGAAAGVFGNATGGRRGALLGAFANGLLITFLPVFLLPVLGDLGFANTT FSDADFGVVGILLGLIMR
Sequences:
>Translated_418_residues MEFFNFLMFDVLSEPAVLVGLIALIGLIAQKKPVTECIKGTVKTIMGFVILGAGATLVVNSLGDFATIFQHAFGIKGVVP NNEAIVSIAQQSFGKEMAMIMFFAMLVNILIARLTPWKFIFLTGHHTLFMSMMVAAILSAGGMSGIPLIAVGSLVVGVTM VLFPALAHPYMKQITGSDEVALGHFSTISYVLAGWIGAKFGNKAHSSEEVQVPKSLLFLRDTPVAISFTMGIIFLITSAF AGPEFVTSVAKGKHWFMFSLMQSITFAAGVYVILQGVRMVIAEIVPAFKGISDKLVPNAKPALDCPIVFPYAPNAVLIGF LSSFAAGLVGMVLLYLLGLTVIIPGVVPHFFVGAAAGVFGNATGGRRGALLGAFANGLLITFLPVFLLPVLGDLGFANTT FSDADFGVVGILLGLIMR >Mature_418_residues MEFFNFLMFDVLSEPAVLVGLIALIGLIAQKKPVTECIKGTVKTIMGFVILGAGATLVVNSLGDFATIFQHAFGIKGVVP NNEAIVSIAQQSFGKEMAMIMFFAMLVNILIARLTPWKFIFLTGHHTLFMSMMVAAILSAGGMSGIPLIAVGSLVVGVTM VLFPALAHPYMKQITGSDEVALGHFSTISYVLAGWIGAKFGNKAHSSEEVQVPKSLLFLRDTPVAISFTMGIIFLITSAF AGPEFVTSVAKGKHWFMFSLMQSITFAAGVYVILQGVRMVIAEIVPAFKGISDKLVPNAKPALDCPIVFPYAPNAVLIGF LSSFAAGLVGMVLLYLLGLTVIIPGVVPHFFVGAAAGVFGNATGGRRGALLGAFANGLLITFLPVFLLPVLGDLGFANTT FSDADFGVVGILLGLIMR
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active- transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3037
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ulaA family [H]
Homologues:
Organism=Escherichia coli, GI87082388, Length=401, Percent_Identity=29.925187032419, Blast_Score=148, Evalue=7e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004703 [H]
Pfam domain/function: PF03611 EIIC-GAT [H]
EC number: NA
Molecular weight: Translated: 44192; Mature: 44192
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFFNFLMFDVLSEPAVLVGLIALIGLIAQKKPVTECIKGTVKTIMGFVILGAGATLVVN CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH SLGDFATIFQHAFGIKGVVPNNEAIVSIAQQSFGKEMAMIMFFAMLVNILIARLTPWKFI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE FLTGHHTLFMSMMVAAILSAGGMSGIPLIAVGSLVVGVTMVLFPALAHPYMKQITGSDEV EEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ALGHFSTISYVLAGWIGAKFGNKAHSSEEVQVPKSLLFLRDTPVAISFTMGIIFLITSAF EHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC AGPEFVTSVAKGKHWFMFSLMQSITFAAGVYVILQGVRMVIAEIVPAFKGISDKLVPNAK CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCC PALDCPIVFPYAPNAVLIGFLSSFAAGLVGMVLLYLLGLTVIIPGVVPHFFVGAAAGVFG CCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NATGGRRGALLGAFANGLLITFLPVFLLPVLGDLGFANTTFSDADFGVVGILLGLIMR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MEFFNFLMFDVLSEPAVLVGLIALIGLIAQKKPVTECIKGTVKTIMGFVILGAGATLVVN CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH SLGDFATIFQHAFGIKGVVPNNEAIVSIAQQSFGKEMAMIMFFAMLVNILIARLTPWKFI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE FLTGHHTLFMSMMVAAILSAGGMSGIPLIAVGSLVVGVTMVLFPALAHPYMKQITGSDEV EEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ALGHFSTISYVLAGWIGAKFGNKAHSSEEVQVPKSLLFLRDTPVAISFTMGIIFLITSAF EHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC AGPEFVTSVAKGKHWFMFSLMQSITFAAGVYVILQGVRMVIAEIVPAFKGISDKLVPNAK CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCC PALDCPIVFPYAPNAVLIGFLSSFAAGLVGMVLLYLLGLTVIIPGVVPHFFVGAAAGVFG CCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NATGGRRGALLGAFANGLLITFLPVFLLPVLGDLGFANTTFSDADFGVVGILLGLIMR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]