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The map label for this gene is rfaQ

Identifier: 145301056

GI number: 145301056

Start: 4514697

End: 4515485

Strand: Direct

Name: rfaQ

Synonym: ASA_4221

Alternate gene names: NA

Gene position: 4514697-4515485 (Clockwise)

Preceding gene: 145301053

Following gene: 145301058

Centisome position: 96.01

GC content: 62.48

Gene sequence:

>789_bases
GTGAAAAAACCGACTCTGGCGGCCGTCCTGATCGTCAAGAACGAAGCCGACAACCTGAAAGCCTGCCTCGCCTCACTCGA
CGGTCTGGTGGACGAGATCGTCATTCTGGACTCCGGCAGCCAGGACGAGACCCCCGCCATCGCCGCCGAATTCGGCGCCC
GTTTCTTCGTCAATACGGTGTGGCCCGGTTTCGGCCGCCAACGCCGCCTCGCCCAATCCCATGTCCAGTCAGAGTGGGTA
CTGTGGCTGGATGCGGACGAGCGGCTCACCCCTGAGCTGAAAGAGGCCATCGCGACCGTCATGGCCAATCCGGCCAGCGA
CACCATCTACTCTATCCCACGCCTCTCCTGGGTATTTGGCCGCTTCATCCGCCACAGCGGCTGGTATCCGGATCGGGTGC
TGCGCCTCTATCCCAAGGCGCTCACCCGTTACAACGAGGTGCTGGTGCACGAGAAGGTGGAGGTGCGCGCCAACATGAAG
ATCGTCAATATCCATGGCGACCTGCTCCACTTCACCTACCGGGATCTGGAGCACTATCTGGTGAAGTCCGCCGGCTATGC
CAGGGCCTGGGCCGATCAGCGCACCGCCCGTGGCAAGAAGGGCTCCCTCGGCCAGGGACTGGTCCATGCCGTGGGCTGTT
TCCTCAAGATGTATCTGCTCAAGGCCGGCTTCCTCGATGGCAAGCAGGGACTCTTGCTCGCGATCCTCTCGGCCCACTCC
ACTTTCGCGAAGTACGCAGACCTCTGGATCCGCCAGCAGCCGCAAGCGCCGGATCAGACCCGCAACTAA

Upstream 100 bases:

>100_bases
TACGGGCGCCGGGACCATGCTCCGCCAGCCGTTTTAGGCTAGAATGGGCGCCAATTCGAGCATGCCCCGCCAGCCGGGCG
CCAACAAGAGCCTTCAACCC

Downstream 100 bases:

>100_bases
TTGCGCAGCCGCTCAAACCAGCATGACGAAACAGGGCCCGAAAGGGCCCTGTTTGCATCTGTCAGCTTTCTGTTCGCCAG
AAGGGCGGTGCCCAGCGAGC

Product: lipopolysaccharide biosynthesis glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKKPTLAAVLIVKNEADNLKACLASLDGLVDEIVILDSGSQDETPAIAAEFGARFFVNTVWPGFGRQRRLAQSHVQSEWV
LWLDADERLTPELKEAIATVMANPASDTIYSIPRLSWVFGRFIRHSGWYPDRVLRLYPKALTRYNEVLVHEKVEVRANMK
IVNIHGDLLHFTYRDLEHYLVKSAGYARAWADQRTARGKKGSLGQGLVHAVGCFLKMYLLKAGFLDGKQGLLLAILSAHS
TFAKYADLWIRQQPQAPDQTRN

Sequences:

>Translated_262_residues
MKKPTLAAVLIVKNEADNLKACLASLDGLVDEIVILDSGSQDETPAIAAEFGARFFVNTVWPGFGRQRRLAQSHVQSEWV
LWLDADERLTPELKEAIATVMANPASDTIYSIPRLSWVFGRFIRHSGWYPDRVLRLYPKALTRYNEVLVHEKVEVRANMK
IVNIHGDLLHFTYRDLEHYLVKSAGYARAWADQRTARGKKGSLGQGLVHAVGCFLKMYLLKAGFLDGKQGLLLAILSAHS
TFAKYADLWIRQQPQAPDQTRN
>Mature_262_residues
MKKPTLAAVLIVKNEADNLKACLASLDGLVDEIVILDSGSQDETPAIAAEFGARFFVNTVWPGFGRQRRLAQSHVQSEWV
LWLDADERLTPELKEAIATVMANPASDTIYSIPRLSWVFGRFIRHSGWYPDRVLRLYPKALTRYNEVLVHEKVEVRANMK
IVNIHGDLLHFTYRDLEHYLVKSAGYARAWADQRTARGKKGSLGQGLVHAVGCFLKMYLLKAGFLDGKQGLLLAILSAHS
TFAKYADLWIRQQPQAPDQTRN

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 29531; Mature: 29531

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPTLAAVLIVKNEADNLKACLASLDGLVDEIVILDSGSQDETPAIAAEFGARFFVNTV
CCCCCEEEEEEEECCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHCCHHHHHHC
WPGFGRQRRLAQSHVQSEWVLWLDADERLTPELKEAIATVMANPASDTIYSIPRLSWVFG
CCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RFIRHSGWYPDRVLRLYPKALTRYNEVLVHEKVEVRANMKIVNIHGDLLHFTYRDLEHYL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECEEEEEECCHHHHHHHHHHHHHH
VKSAGYARAWADQRTARGKKGSLGQGLVHAVGCFLKMYLLKAGFLDGKQGLLLAILSAHS
HHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TFAKYADLWIRQQPQAPDQTRN
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKPTLAAVLIVKNEADNLKACLASLDGLVDEIVILDSGSQDETPAIAAEFGARFFVNTV
CCCCCEEEEEEEECCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHCCHHHHHHC
WPGFGRQRRLAQSHVQSEWVLWLDADERLTPELKEAIATVMANPASDTIYSIPRLSWVFG
CCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RFIRHSGWYPDRVLRLYPKALTRYNEVLVHEKVEVRANMKIVNIHGDLLHFTYRDLEHYL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECEEEEEECCHHHHHHHHHHHHHH
VKSAGYARAWADQRTARGKKGSLGQGLVHAVGCFLKMYLLKAGFLDGKQGLLLAILSAHS
HHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TFAKYADLWIRQQPQAPDQTRN
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]