Click here to switch to the map view.

The map label for this gene is rsbT [H]

Identifier: 145300782

GI number: 145300782

Start: 4208224

End: 4209285

Strand: Direct

Name: rsbT [H]

Synonym: ASA_3922

Alternate gene names: 145300782

Gene position: 4208224-4209285 (Clockwise)

Preceding gene: 145300781

Following gene: 145300783

Centisome position: 89.49

GC content: 62.9

Gene sequence:

>1062_bases
ATGCAAGAGCATGCGACTCAGGAGGCCAACTATCCGCTACGCCACGATATCGATCTGCACCTGACTGTGATGGCGGTGCG
TCGGCTTCCCTTTATCGCCAGCCTGTCTGACGTGGATCGTGCCATGCTCTCCACCGTGGTTTCCGAGCTTGGCAGCAATA
TCCTGAAATACGCCGGGCAGGGGGAGATCACCCTGACCCTCCATCACCCCAAGGGACGGGCCTGCATCGACATCATCGCC
CGTGACAAAGGGCCCGGCATACCGGATGTGCATCAGGCCCTGCAGGATCACTACAGCACCTCGGGCACCCTGGGGCTGGG
GCTACCCGGCGTGCGGCGCATGATGTCAGAGCTCACCATCAGCACACCACCGGAAGGGGGCACCCTGGTGCAGGCTCGAA
AGTGGCTGGGCGCGGCACCCTCGACGATACGCCTCGCAATGCCAACCCAGTCATGGGGTCAGCCTGGTTTGAAACTGGCA
TGGGCCAGCGAAAACAGGCCCTGCTATCCGGAAAAGGTCTCCGGCGATCTGGTCTTTATCCGTCCCTCCCCCGACGGCGT
CTTGCTGGTACTGATCGATGTCAGCGGCCACGGCACCTCGGCCAACAAGCTGGCACTGACACTGGAAGAGGCGCTGCAAA
ACACCCCTGAGCAGGAGCCGGCACCTCTGCTGCAGCTGTTGCACCAACACTGCATCGGTACACGGGGAGCGGCAGCTGGC
ATAGCCCTGGTCAACAGTGAACGGGGGGAACTGAGCTACGCCGGTATCGGCAACACCCGCATCTGTCTGCGCGGCCATGA
CCTCTGGCGCGGCATCTCCCGCGATGGAGTGCTGGGGGAGCGCTTCCCCACCCCCTTGCTGCAACGCCAGCCCATGGAGC
CGGGGGATGTGCTGATGCTCTATTCGGATGGCATCAGCGAATCGCTCAACCTGCGTGACGGCGCACTGGATCTGGGGGAG
GATCCCGCCATCCTGGCCCGTCAAGTCATAGACCACAGCGGCCGCAGCACGGACGATGCGAGTTGTATCGTGTTGCGGGT
ACAACCGGAGAAGGAGCGCTAG

Upstream 100 bases:

>100_bases
GCTGGCCGAAGCGCAGCCCGGGCCGCTGCGCTGCTTCATCGACATGGACGACGCCTTCGCCCACGTCCGCCATCTCAAGG
GCGAGGAGTAAAGCGCCATG

Downstream 100 bases:

>100_bases
ATGCGGCAGCGGATCGGTGATATCAGGCTCTCTGGCCCGGCGGCAGCCCTCACCGCCAGACGCAAGGTGATCCAGGTGCT
CACCTGCATCGACAAGAACC

Product: two-component system sensor histidine kinase

Products: NA

Alternate protein names: Anti-sigma-B factor rsbT; Switch protein/serine kinase [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MQEHATQEANYPLRHDIDLHLTVMAVRRLPFIASLSDVDRAMLSTVVSELGSNILKYAGQGEITLTLHHPKGRACIDIIA
RDKGPGIPDVHQALQDHYSTSGTLGLGLPGVRRMMSELTISTPPEGGTLVQARKWLGAAPSTIRLAMPTQSWGQPGLKLA
WASENRPCYPEKVSGDLVFIRPSPDGVLLVLIDVSGHGTSANKLALTLEEALQNTPEQEPAPLLQLLHQHCIGTRGAAAG
IALVNSERGELSYAGIGNTRICLRGHDLWRGISRDGVLGERFPTPLLQRQPMEPGDVLMLYSDGISESLNLRDGALDLGE
DPAILARQVIDHSGRSTDDASCIVLRVQPEKER

Sequences:

>Translated_353_residues
MQEHATQEANYPLRHDIDLHLTVMAVRRLPFIASLSDVDRAMLSTVVSELGSNILKYAGQGEITLTLHHPKGRACIDIIA
RDKGPGIPDVHQALQDHYSTSGTLGLGLPGVRRMMSELTISTPPEGGTLVQARKWLGAAPSTIRLAMPTQSWGQPGLKLA
WASENRPCYPEKVSGDLVFIRPSPDGVLLVLIDVSGHGTSANKLALTLEEALQNTPEQEPAPLLQLLHQHCIGTRGAAAG
IALVNSERGELSYAGIGNTRICLRGHDLWRGISRDGVLGERFPTPLLQRQPMEPGDVLMLYSDGISESLNLRDGALDLGE
DPAILARQVIDHSGRSTDDASCIVLRVQPEKER
>Mature_353_residues
MQEHATQEANYPLRHDIDLHLTVMAVRRLPFIASLSDVDRAMLSTVVSELGSNILKYAGQGEITLTLHHPKGRACIDIIA
RDKGPGIPDVHQALQDHYSTSGTLGLGLPGVRRMMSELTISTPPEGGTLVQARKWLGAAPSTIRLAMPTQSWGQPGLKLA
WASENRPCYPEKVSGDLVFIRPSPDGVLLVLIDVSGHGTSANKLALTLEEALQNTPEQEPAPLLQLLHQHCIGTRGAAAG
IALVNSERGELSYAGIGNTRICLRGHDLWRGISRDGVLGERFPTPLLQRQPMEPGDVLMLYSDGISESLNLRDGALDLGE
DPAILARQVIDHSGRSTDDASCIVLRVQPEKER

Specific function: Provides the crucial link between the upstream module (communication of environmental stress) and the downstream module (integration of the environmental signals with signals of energy stress) that compose the signal transduction pathway controlling the s

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 38224; Mature: 38224

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEHATQEANYPLRHDIDLHLTVMAVRRLPFIASLSDVDRAMLSTVVSELGSNILKYAGQ
CCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GEITLTLHHPKGRACIDIIARDKGPGIPDVHQALQDHYSTSGTLGLGLPGVRRMMSELTI
CCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCEE
STPPEGGTLVQARKWLGAAPSTIRLAMPTQSWGQPGLKLAWASENRPCYPEKVSGDLVFI
CCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEE
RPSPDGVLLVLIDVSGHGTSANKLALTLEEALQNTPEQEPAPLLQLLHQHCIGTRGAAAG
EECCCCEEEEEEEECCCCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCE
IALVNSERGELSYAGIGNTRICLRGHDLWRGISRDGVLGERFPTPLLQRQPMEPGDVLML
EEEEECCCCCEEEECCCCCEEEEECCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEE
YSDGISESLNLRDGALDLGEDPAILARQVIDHSGRSTDDASCIVLRVQPEKER
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MQEHATQEANYPLRHDIDLHLTVMAVRRLPFIASLSDVDRAMLSTVVSELGSNILKYAGQ
CCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GEITLTLHHPKGRACIDIIARDKGPGIPDVHQALQDHYSTSGTLGLGLPGVRRMMSELTI
CCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCEE
STPPEGGTLVQARKWLGAAPSTIRLAMPTQSWGQPGLKLAWASENRPCYPEKVSGDLVFI
CCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEE
RPSPDGVLLVLIDVSGHGTSANKLALTLEEALQNTPEQEPAPLLQLLHQHCIGTRGAAAG
EECCCCEEEEEEEECCCCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCE
IALVNSERGELSYAGIGNTRICLRGHDLWRGISRDGVLGERFPTPLLQRQPMEPGDVLML
EEEEECCCCCEEEECCCCCEEEEECCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEE
YSDGISESLNLRDGALDLGEDPAILARQVIDHSGRSTDDASCIVLRVQPEKER
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002610; 9384377; 8002609; 8824586; 9786195 [H]