| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300781
Identifier: 145300781
GI number: 145300781
Start: 4207837
End: 4208214
Strand: Direct
Name: 145300781
Synonym: ASA_3921
Alternate gene names: NA
Gene position: 4207837-4208214 (Clockwise)
Preceding gene: 145300780
Following gene: 145300782
Centisome position: 89.48
GC content: 62.96
Gene sequence:
>378_bases ATGACCATGCAGCTCAACAACGATCTTGGCATCGCCGATGTGGCCGACTGCATAGTGGTCAGCATGCGTCCCGATCTCGG TGACGATGGCATGCAGATGCTGATGCAGGCCCTCTCCCAGCGACTGGTACACGGGCGTCACCATGCCGTGTTGCTCGACT TCTCCGGCGTCATGCTGCTGGATCACCATGAATTCAGACAGGTACGCAAGCGGGCCGAGGTATGCCGCCTGTTAGGCGCC ATCTGCCTGCTGGTGGGGCTCAATGCCGGGATCGCCGCGTCTCTGGCGCTGGCCGAAGCGCAGCCCGGGCCGCTGCGCTG CTTCATCGACATGGACGACGCCTTCGCCCACGTCCGCCATCTCAAGGGCGAGGAGTAA
Upstream 100 bases:
>100_bases GCTGGGGGTGTCGGTCGGTGACGTCCGCACCACGGCAACCCTGAGAGATGCCTTCGAAATAGCGCTCAAACGGGTCGGTT CCACCCTCTAGGATGCGGCC
Downstream 100 bases:
>100_bases AGCGCCATGATGCAAGAGCATGCGACTCAGGAGGCCAACTATCCGCTACGCCACGATATCGATCTGCACCTGACTGTGAT GGCGGTGCGTCGGCTTCCCT
Product: anti-anti-sigma regulatory factor
Products: NA
Alternate protein names: Anti-Anti-Sigma Regulatory Factor
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MTMQLNNDLGIADVADCIVVSMRPDLGDDGMQMLMQALSQRLVHGRHHAVLLDFSGVMLLDHHEFRQVRKRAEVCRLLGA ICLLVGLNAGIAASLALAEAQPGPLRCFIDMDDAFAHVRHLKGEE
Sequences:
>Translated_125_residues MTMQLNNDLGIADVADCIVVSMRPDLGDDGMQMLMQALSQRLVHGRHHAVLLDFSGVMLLDHHEFRQVRKRAEVCRLLGA ICLLVGLNAGIAASLALAEAQPGPLRCFIDMDDAFAHVRHLKGEE >Mature_124_residues TMQLNNDLGIADVADCIVVSMRPDLGDDGMQMLMQALSQRLVHGRHHAVLLDFSGVMLLDHHEFRQVRKRAEVCRLLGAI CLLVGLNAGIAASLALAEAQPGPLRCFIDMDDAFAHVRHLKGEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13727; Mature: 13596
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMQLNNDLGIADVADCIVVSMRPDLGDDGMQMLMQALSQRLVHGRHHAVLLDFSGVMLL CEEEECCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEE DHHEFRQVRKRAEVCRLLGAICLLVGLNAGIAASLALAEAQPGPLRCFIDMDDAFAHVRH CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECHHHHHHHHH LKGEE CCCCC >Mature Secondary Structure TMQLNNDLGIADVADCIVVSMRPDLGDDGMQMLMQALSQRLVHGRHHAVLLDFSGVMLL EEEECCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEE DHHEFRQVRKRAEVCRLLGAICLLVGLNAGIAASLALAEAQPGPLRCFIDMDDAFAHVRH CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECHHHHHHHHH LKGEE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA