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The map label for this gene is bdlA [H]

Identifier: 145300780

GI number: 145300780

Start: 4206607

End: 4207827

Strand: Direct

Name: bdlA [H]

Synonym: ASA_3920

Alternate gene names: 145300780

Gene position: 4206607-4207827 (Clockwise)

Preceding gene: 145300778

Following gene: 145300781

Centisome position: 89.46

GC content: 61.02

Gene sequence:

>1221_bases
ATGGACGCGCACACTTCCTCTTCCAAGACCACCGGTTCGGCCCCTTCCCCTCATCAGGCCGGGATGGACGCCATCGATCA
GGTGCTGGCCCGGCTCGAACTCTCGCCAGAGGGGCAGATCCTGGATGCCAACCCTCATTTTCTCACCATCATGGGCTACC
CGCTGGATGAGCTAAAGGGCAAGCACCACGGCATGCTGCTCTCCCCGGATGAGGCTCAGTCTGCCACTTATGACACTTTC
TGGGAGACGCTGCGCAGCGGCACGTCACAGGAAAGCGAGTTTCACCTGCTGGATAAACAGGGGCGGGATATCTGGATCCG
GGGTGCCTGCAGCCCGGTTCTGGATGCCGAGGAGCAGCTGACCCGCATCATCGTCTACGCCATGGATCTGACCGGGCAGA
AGCAGCTCACTGCCAGTTTCGAGGGCCAGCTCAATGCCCTGAGCCGGGTCATGGGAAAGGTGGAGTTCTCTCTGGATGGC
ACCATACTGGATGCCAATCCACGCTTTCTCGACATAGTGGGCTACCGGCTGGAGGAGCTGAAGGGCCAGCACCACAGGCT
GCTGGTTGACCCGGACTACGCCCAGTCGGCGGATTACCGCACCTTCTGGGAAACACTGCGACGGGGCGAGTTTCTCGCAG
GCGAATTCTGCCGGCTCGGCAAGCAGGGACAGGAGGTCTGGATCCAGGGATCCTACAACCCGGTGCTGGATCTGAACGGC
AAGCCCAGCAAAATCGTCAAATTTGCCACCGACATAACGGCGCAGGTGGAGCAGCACCGTCAGCTCAAGCGTGCCATGGT
GGAAGCGGAAGAGGCCGCCAGAGTTCGCGAGGAGCTGCACAAGTCGCTGCAGGAGATGTCTACTCCTGTCACCCCTATCT
GGGACGGGATCCTGCTGCTGCCATTGGTGGGGATCATCGACTCAATGCGCACCGCCGACGTGATGAACAAGTCGCTCACC
AAGATCGCCGAAACCCGGGCCCGGGTCTTCGTGCTGGATATTGCCGGTGTCGCTACCGTGGATACCGGCGTCGCCAACCA
GCTGATCAAGATCACCAAGGCGACCCAGTTCATGGGCTGTGAGGCCATCATCTCGGGAGTCTCTCCCGCCATTGCCCGCA
CCATGGTGGAGCTGGGGGTGTCGGTCGGTGACGTCCGCACCACGGCAACCCTGAGAGATGCCTTCGAAATAGCGCTCAAA
CGGGTCGGTTCCACCCTCTAG

Upstream 100 bases:

>100_bases
TTTGACCCTTTATTCCAGCCGGAAGAGCCGGAGTGGGCTATAACTGCTTAGCACCCTTTATTGACATCAAAATCAACGAC
TCCCTCTCACTGGAGATGCC

Downstream 100 bases:

>100_bases
GATGCGGCCATGACCATGCAGCTCAACAACGATCTTGGCATCGCCGATGTGGCCGACTGCATAGTGGTCAGCATGCGTCC
CGATCTCGGTGACGATGGCA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MDAHTSSSKTTGSAPSPHQAGMDAIDQVLARLELSPEGQILDANPHFLTIMGYPLDELKGKHHGMLLSPDEAQSATYDTF
WETLRSGTSQESEFHLLDKQGRDIWIRGACSPVLDAEEQLTRIIVYAMDLTGQKQLTASFEGQLNALSRVMGKVEFSLDG
TILDANPRFLDIVGYRLEELKGQHHRLLVDPDYAQSADYRTFWETLRRGEFLAGEFCRLGKQGQEVWIQGSYNPVLDLNG
KPSKIVKFATDITAQVEQHRQLKRAMVEAEEAARVREELHKSLQEMSTPVTPIWDGILLLPLVGIIDSMRTADVMNKSLT
KIAETRARVFVLDIAGVATVDTGVANQLIKITKATQFMGCEAIISGVSPAIARTMVELGVSVGDVRTTATLRDAFEIALK
RVGSTL

Sequences:

>Translated_406_residues
MDAHTSSSKTTGSAPSPHQAGMDAIDQVLARLELSPEGQILDANPHFLTIMGYPLDELKGKHHGMLLSPDEAQSATYDTF
WETLRSGTSQESEFHLLDKQGRDIWIRGACSPVLDAEEQLTRIIVYAMDLTGQKQLTASFEGQLNALSRVMGKVEFSLDG
TILDANPRFLDIVGYRLEELKGQHHRLLVDPDYAQSADYRTFWETLRRGEFLAGEFCRLGKQGQEVWIQGSYNPVLDLNG
KPSKIVKFATDITAQVEQHRQLKRAMVEAEEAARVREELHKSLQEMSTPVTPIWDGILLLPLVGIIDSMRTADVMNKSLT
KIAETRARVFVLDIAGVATVDTGVANQLIKITKATQFMGCEAIISGVSPAIARTMVELGVSVGDVRTTATLRDAFEIALK
RVGSTL
>Mature_406_residues
MDAHTSSSKTTGSAPSPHQAGMDAIDQVLARLELSPEGQILDANPHFLTIMGYPLDELKGKHHGMLLSPDEAQSATYDTF
WETLRSGTSQESEFHLLDKQGRDIWIRGACSPVLDAEEQLTRIIVYAMDLTGQKQLTASFEGQLNALSRVMGKVEFSLDG
TILDANPRFLDIVGYRLEELKGQHHRLLVDPDYAQSADYRTFWETLRRGEFLAGEFCRLGKQGQEVWIQGSYNPVLDLNG
KPSKIVKFATDITAQVEQHRQLKRAMVEAEEAARVREELHKSLQEMSTPVTPIWDGILLLPLVGIIDSMRTADVMNKSLT
KIAETRARVFVLDIAGVATVDTGVANQLIKITKATQFMGCEAIISGVSPAIARTMVELGVSVGDVRTTATLRDAFEIALK
RVGSTL

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 44809; Mature: 44809

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAHTSSSKTTGSAPSPHQAGMDAIDQVLARLELSPEGQILDANPHFLTIMGYPLDELKG
CCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCHHHHCC
KHHGMLLSPDEAQSATYDTFWETLRSGTSQESEFHLLDKQGRDIWIRGACSPVLDAEEQL
CCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHH
TRIIVYAMDLTGQKQLTASFEGQLNALSRVMGKVEFSLDGTILDANPRFLDIVGYRLEEL
HHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCEEECCCCCEEHHHHHHHHHH
KGQHHRLLVDPDYAQSADYRTFWETLRRGEFLAGEFCRLGKQGQEVWIQGSYNPVLDLNG
CCCCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCCEEECCC
KPSKIVKFATDITAQVEQHRQLKRAMVEAEEAARVREELHKSLQEMSTPVTPIWDGILLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
PLVGIIDSMRTADVMNKSLTKIAETRARVFVLDIAGVATVDTGVANQLIKITKATQFMGC
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
EAIISGVSPAIARTMVELGVSVGDVRTTATLRDAFEIALKRVGSTL
HHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDAHTSSSKTTGSAPSPHQAGMDAIDQVLARLELSPEGQILDANPHFLTIMGYPLDELKG
CCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCHHHHCC
KHHGMLLSPDEAQSATYDTFWETLRSGTSQESEFHLLDKQGRDIWIRGACSPVLDAEEQL
CCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHH
TRIIVYAMDLTGQKQLTASFEGQLNALSRVMGKVEFSLDGTILDANPRFLDIVGYRLEEL
HHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCEEECCCCCEEHHHHHHHHHH
KGQHHRLLVDPDYAQSADYRTFWETLRRGEFLAGEFCRLGKQGQEVWIQGSYNPVLDLNG
CCCCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCCEEECCC
KPSKIVKFATDITAQVEQHRQLKRAMVEAEEAARVREELHKSLQEMSTPVTPIWDGILLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
PLVGIIDSMRTADVMNKSLTKIAETRARVFVLDIAGVATVDTGVANQLIKITKATQFMGC
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
EAIISGVSPAIARTMVELGVSVGDVRTTATLRDAFEIALKRVGSTL
HHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]