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The map label for this gene is int [H]

Identifier: 145300732

GI number: 145300732

Start: 4154791

End: 4155852

Strand: Direct

Name: int [H]

Synonym: ASA_3871

Alternate gene names: 145300732

Gene position: 4154791-4155852 (Clockwise)

Preceding gene: 145300731

Following gene: 145300733

Centisome position: 88.35

GC content: 51.98

Gene sequence:

>1062_bases
ATGGTAGTTAAAAAAGTTGATGGAAAGACGAAGCCTTGGCTAGCTGACCTCCGTCCTGATGGCGATGGCGGCCGAAGAAT
ACGAAAGAGCTTCATGACAAAAGGTGAAGCTCTTGCGTGGGAGAGGCACCAGCTTACTAACAAGCCCTGGTTGAAAGAGC
CTGAACCAGAGAGTGAAAAGCATGAGCAGCGACGGCTGCTTGACCTTGTTCATATCTGGTTTGGTCGTCATGGTCAGACA
CTGGCCGATGGTGATCGGCGACGGGATAAGCTCGTCTGGTTATGTGAAGCACTTGATAACCCCATTGCCACCGAGTTCAC
CTCCGAGCATTTCTCGGCGTACCGCGAGCGGCGGTTGGCGGGTGAGCTCTATGTACCAGGACAGTGTAAGAAGGTCACAC
CGACGACCATCAACCGGGAGCAACTTTACCTGCAGGCAGTGTTTAATGAACTGGCCCGTCTTGGTGTGTGGAACGGTGGT
AATCCGTTGTCTGACCTACGCCAATATAAGGTTCAGGAATCAGAGCTGGCCTATCTCTCCCAAGATGAGATTGAACAGTT
GCTTGATGCCGGCAAGGAACAGCGAGATCTCTGGTTGGTTGTTATGCTCTGCCTCTCTACTGGGGCCCGCTGGTCTGAGA
TTGAGAAAGTCAGCCGTTCCCAGGTTGGTATGGGGCGGATCACTTTCACCAAGACCAAGGGGAAACGCAACCGGACTGTG
CCTGTGGCCCCATGGTTATTGGCCATGTTGCCCAAACGAACTGGTAGATTGTTCGATGATTGCTATGCCGAGTTTGAGAA
AGCCATCAGGCGAGCCAACATCAAGTTGCCGGTAGGGCAGAGTACCCATGTTCTGCGTCATACATTCGCCAGCCACTTCA
TGATGAACGGTGGCAACATCCTGGTGTTGCAGCGAATCCTTGGCCACACAGACATCAAAATGACGATGCGCTATTCACAT
TTTGCCCCGGATCATCTGGAAGATGCGGTGCGTCTCAACCCCATTACTGCGCTGAAAAACGTACATAAACAGTCCATTGA
TTTGCCCCACATTGCCTTATAA

Upstream 100 bases:

>100_bases
AGGGTCGTGTGGGCTGGTAAGAAGTTCTGAGCAGTTTGAATGCTTTCTATGATGGCGGCTTTGGCAACGACACCTCATAA
GAAAGCGCGGGTGGTGTGCA

Downstream 100 bases:

>100_bases
CTCAACATATCGAGATTTTAGCGTCCTTTAGTATCAGTAACTTACTGATTTGTAAGGGAGCCTATGGGTTTCAAAATCCG
CCGATGAATAATCGTGTCGG

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MVVKKVDGKTKPWLADLRPDGDGGRRIRKSFMTKGEALAWERHQLTNKPWLKEPEPESEKHEQRRLLDLVHIWFGRHGQT
LADGDRRRDKLVWLCEALDNPIATEFTSEHFSAYRERRLAGELYVPGQCKKVTPTTINREQLYLQAVFNELARLGVWNGG
NPLSDLRQYKVQESELAYLSQDEIEQLLDAGKEQRDLWLVVMLCLSTGARWSEIEKVSRSQVGMGRITFTKTKGKRNRTV
PVAPWLLAMLPKRTGRLFDDCYAEFEKAIRRANIKLPVGQSTHVLRHTFASHFMMNGGNILVLQRILGHTDIKMTMRYSH
FAPDHLEDAVRLNPITALKNVHKQSIDLPHIAL

Sequences:

>Translated_353_residues
MVVKKVDGKTKPWLADLRPDGDGGRRIRKSFMTKGEALAWERHQLTNKPWLKEPEPESEKHEQRRLLDLVHIWFGRHGQT
LADGDRRRDKLVWLCEALDNPIATEFTSEHFSAYRERRLAGELYVPGQCKKVTPTTINREQLYLQAVFNELARLGVWNGG
NPLSDLRQYKVQESELAYLSQDEIEQLLDAGKEQRDLWLVVMLCLSTGARWSEIEKVSRSQVGMGRITFTKTKGKRNRTV
PVAPWLLAMLPKRTGRLFDDCYAEFEKAIRRANIKLPVGQSTHVLRHTFASHFMMNGGNILVLQRILGHTDIKMTMRYSH
FAPDHLEDAVRLNPITALKNVHKQSIDLPHIAL
>Mature_353_residues
MVVKKVDGKTKPWLADLRPDGDGGRRIRKSFMTKGEALAWERHQLTNKPWLKEPEPESEKHEQRRLLDLVHIWFGRHGQT
LADGDRRRDKLVWLCEALDNPIATEFTSEHFSAYRERRLAGELYVPGQCKKVTPTTINREQLYLQAVFNELARLGVWNGG
NPLSDLRQYKVQESELAYLSQDEIEQLLDAGKEQRDLWLVVMLCLSTGARWSEIEKVSRSQVGMGRITFTKTKGKRNRTV
PVAPWLLAMLPKRTGRLFDDCYAEFEKAIRRANIKLPVGQSTHVLRHTFASHFMMNGGNILVLQRILGHTDIKMTMRYSH
FAPDHLEDAVRLNPITALKNVHKQSIDLPHIAL

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 40687; Mature: 40687

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVKKVDGKTKPWLADLRPDGDGGRRIRKSFMTKGEALAWERHQLTNKPWLKEPEPESEK
CCEECCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHH
HEQRRLLDLVHIWFGRHGQTLADGDRRRDKLVWLCEALDNPIATEFTSEHFSAYRERRLA
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GELYVPGQCKKVTPTTINREQLYLQAVFNELARLGVWNGGNPLSDLRQYKVQESELAYLS
CCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHCC
QDEIEQLLDAGKEQRDLWLVVMLCLSTGARWSEIEKVSRSQVGMGRITFTKTKGKRNRTV
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
PVAPWLLAMLPKRTGRLFDDCYAEFEKAIRRANIKLPVGQSTHVLRHTFASHFMMNGGNI
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
LVLQRILGHTDIKMTMRYSHFAPDHLEDAVRLNPITALKNVHKQSIDLPHIAL
EEHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVVKKVDGKTKPWLADLRPDGDGGRRIRKSFMTKGEALAWERHQLTNKPWLKEPEPESEK
CCEECCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHH
HEQRRLLDLVHIWFGRHGQTLADGDRRRDKLVWLCEALDNPIATEFTSEHFSAYRERRLA
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GELYVPGQCKKVTPTTINREQLYLQAVFNELARLGVWNGGNPLSDLRQYKVQESELAYLS
CCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHCC
QDEIEQLLDAGKEQRDLWLVVMLCLSTGARWSEIEKVSRSQVGMGRITFTKTKGKRNRTV
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
PVAPWLLAMLPKRTGRLFDDCYAEFEKAIRRANIKLPVGQSTHVLRHTFASHFMMNGGNI
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
LVLQRILGHTDIKMTMRYSHFAPDHLEDAVRLNPITALKNVHKQSIDLPHIAL
EEHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA