| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
Click here to switch to the map view.
The map label for this gene is 145300720
Identifier: 145300720
GI number: 145300720
Start: 4146964
End: 4147821
Strand: Direct
Name: 145300720
Synonym: ASA_3859
Alternate gene names: NA
Gene position: 4146964-4147821 (Clockwise)
Preceding gene: 145300719
Following gene: 145300721
Centisome position: 88.19
GC content: 38.11
Gene sequence:
>858_bases GTGAGTCTTGTTCAAATTCATTTTGATGGCGATATAGCGGTTAATCACCAAGTGAGCATGAGAACGTTGGGTAAAACACT TATCCACCTGCAAAACTCAATCGATAGAGCCTATTTAGAGCAACATTATGGGCAGTTATGGAAATTTGCGAAAATGCGGC AGGAGTTCTACTCAGATGTTGAACTATTGGTGCAAGAACCGAGGGAGGGTGGTTATGTTCTTGATTTTTTATCGTCAAAT CCAGTAACCAAATCTGTCATAAATCGGGTTTCTAGTGCTGTAAATGGTGCTGTGGAAGCTTCAAAGAAAGCAGGGCTGGA TAAAGCGACTAAGATTGAAGAATCTTTAAGCAAAAGGATTTCACAAGTTGAAAGTGGAATTCTAGTTCCCAAAGATCTTA GGACGATGATAGACAACCCCGATGCTTCAGTAATAAGGCAATATGGAGATCGGGCTATCTCTAGAGAAATCGATCAAATA CTTTCCATCATTAGGTCTAGCCACGCAGGAGATAGTACCTTTGAACTTACATTAAGGGGCGATAAATCTATTAAATTCGA ATTTAATAAAACATCTGCAGGCAGCTTTCATTCAACTGTTTCTCGCAGAGAATTGGGCGAGCCAGTTCTATATAATGCCA CTATATCATCACTAGATCGGCATAATAATAATGGTAAAATATATAACTTGATTACGGAGAAAGTGGCTAACATTCATTTT TTCAATGAAAGTTTTCTTGAGATGGCAATGCCATTTTTTCAAGGAAAAAAAGCAATGACTTTTGTTGGTTCACCTTTGAT AGAATACGGTGCATTTGACCCAAATGCAGGGGATATTTATTTCATTAAGTTGGCGTAA
Upstream 100 bases:
>100_bases CATCTATCGAAGTAGAGTCAACAGTCATCATCATTGATGAGCACATAAACACATATCAATGCCCAAAAATTTTTGGGAAT TTTTAATATTGGGAGTTATT
Downstream 100 bases:
>100_bases TTATGGAAGAACTGGCGAAGGCAGTACAAAAAAAGTATGTTGAAGATATTACTAAAAAATATCCTATTCATCGCTTTTTT GTAATGTTTATAGTGCTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSLVQIHFDGDIAVNHQVSMRTLGKTLIHLQNSIDRAYLEQHYGQLWKFAKMRQEFYSDVELLVQEPREGGYVLDFLSSN PVTKSVINRVSSAVNGAVEASKKAGLDKATKIEESLSKRISQVESGILVPKDLRTMIDNPDASVIRQYGDRAISREIDQI LSIIRSSHAGDSTFELTLRGDKSIKFEFNKTSAGSFHSTVSRRELGEPVLYNATISSLDRHNNNGKIYNLITEKVANIHF FNESFLEMAMPFFQGKKAMTFVGSPLIEYGAFDPNAGDIYFIKLA
Sequences:
>Translated_285_residues MSLVQIHFDGDIAVNHQVSMRTLGKTLIHLQNSIDRAYLEQHYGQLWKFAKMRQEFYSDVELLVQEPREGGYVLDFLSSN PVTKSVINRVSSAVNGAVEASKKAGLDKATKIEESLSKRISQVESGILVPKDLRTMIDNPDASVIRQYGDRAISREIDQI LSIIRSSHAGDSTFELTLRGDKSIKFEFNKTSAGSFHSTVSRRELGEPVLYNATISSLDRHNNNGKIYNLITEKVANIHF FNESFLEMAMPFFQGKKAMTFVGSPLIEYGAFDPNAGDIYFIKLA >Mature_284_residues SLVQIHFDGDIAVNHQVSMRTLGKTLIHLQNSIDRAYLEQHYGQLWKFAKMRQEFYSDVELLVQEPREGGYVLDFLSSNP VTKSVINRVSSAVNGAVEASKKAGLDKATKIEESLSKRISQVESGILVPKDLRTMIDNPDASVIRQYGDRAISREIDQIL SIIRSSHAGDSTFELTLRGDKSIKFEFNKTSAGSFHSTVSRRELGEPVLYNATISSLDRHNNNGKIYNLITEKVANIHFF NESFLEMAMPFFQGKKAMTFVGSPLIEYGAFDPNAGDIYFIKLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31976; Mature: 31845
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVQIHFDGDIAVNHQVSMRTLGKTLIHLQNSIDRAYLEQHYGQLWKFAKMRQEFYSDV CCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLVQEPREGGYVLDFLSSNPVTKSVINRVSSAVNGAVEASKKAGLDKATKIEESLSKRI HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SQVESGILVPKDLRTMIDNPDASVIRQYGDRAISREIDQILSIIRSSHAGDSTFELTLRG HHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC DKSIKFEFNKTSAGSFHSTVSRRELGEPVLYNATISSLDRHNNNGKIYNLITEKVANIHF CCEEEEEECCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEHHHHHHHHHHHC FNESFLEMAMPFFQGKKAMTFVGSPLIEYGAFDPNAGDIYFIKLA CHHHHHHHHHHHHCCCCHHHHHCCCHHHHCCCCCCCCCEEEEEEC >Mature Secondary Structure SLVQIHFDGDIAVNHQVSMRTLGKTLIHLQNSIDRAYLEQHYGQLWKFAKMRQEFYSDV CEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLVQEPREGGYVLDFLSSNPVTKSVINRVSSAVNGAVEASKKAGLDKATKIEESLSKRI HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SQVESGILVPKDLRTMIDNPDASVIRQYGDRAISREIDQILSIIRSSHAGDSTFELTLRG HHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC DKSIKFEFNKTSAGSFHSTVSRRELGEPVLYNATISSLDRHNNNGKIYNLITEKVANIHF CCEEEEEECCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEHHHHHHHHHHHC FNESFLEMAMPFFQGKKAMTFVGSPLIEYGAFDPNAGDIYFIKLA CHHHHHHHHHHHHCCCCHHHHHCCCHHHHCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA