| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300719
Identifier: 145300719
GI number: 145300719
Start: 4146096
End: 4146602
Strand: Direct
Name: 145300719
Synonym: ASA_3858
Alternate gene names: NA
Gene position: 4146096-4146602 (Clockwise)
Preceding gene: 145300718
Following gene: 145300720
Centisome position: 88.17
GC content: 40.04
Gene sequence:
>507_bases GTGCAGACACGTAAAGATGTTCTTAAAGAATGGTACAAGCGAGTGGCAGTAACGCAAGCTGCACATTATTATTCCGCCGA TAGTTTAAATAATAGGAAGTATTGGCTGGGTGTGCCAACGGTTATTTTGACCACGCTAGTTGGTACATCAGTATTTGCTA CGGTCTCACAGGAAAACACGGAAGCTTGGGTGAAAATATGTTTAGGGTTGGCAAGTGTAATTGCTGCATTATTGGCAAGT TTGCAAACATTTCTTGGTGATTCAGAAAGATCAGAAAAACATCGGATAGCTGGTGCGAAGTATGGTGCTTTAGGCCGAGA GCTTGAGTTTATACTTACTATCGAGCAGGATATTGGTGAGGTTCGGTTCGATAATTTAAGGGTTAAGCTAGATGAATTAG CTCTTGAATCTCCCAATAACCAACTTAAAATTTATCGTATGGCTGGAGCAAAAGATATTAAAGTTTTACCAAATGACAAA GAAGCTAGCCCACCTCAATTAGCTTAA
Upstream 100 bases:
>100_bases TCTATGCGTTGTAAAGGTGCGTTGTAAAGGTGCTTTGTAGAGGCTTCGGTACTGCGTTATTAAAAACTTAACGTGGTATG GTATTAATCAAGGAGGATTT
Downstream 100 bases:
>100_bases TTTTACCTCACAAAATACTTAAGAGGAAAAATCTGGGGCACACATCTTACTTGGCAAGTCATAGTCTAGCAGGCCGTTGA TAATGGACTGGTGATGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MQTRKDVLKEWYKRVAVTQAAHYYSADSLNNRKYWLGVPTVILTTLVGTSVFATVSQENTEAWVKICLGLASVIAALLAS LQTFLGDSERSEKHRIAGAKYGALGRELEFILTIEQDIGEVRFDNLRVKLDELALESPNNQLKIYRMAGAKDIKVLPNDK EASPPQLA
Sequences:
>Translated_168_residues MQTRKDVLKEWYKRVAVTQAAHYYSADSLNNRKYWLGVPTVILTTLVGTSVFATVSQENTEAWVKICLGLASVIAALLAS LQTFLGDSERSEKHRIAGAKYGALGRELEFILTIEQDIGEVRFDNLRVKLDELALESPNNQLKIYRMAGAKDIKVLPNDK EASPPQLA >Mature_168_residues MQTRKDVLKEWYKRVAVTQAAHYYSADSLNNRKYWLGVPTVILTTLVGTSVFATVSQENTEAWVKICLGLASVIAALLAS LQTFLGDSERSEKHRIAGAKYGALGRELEFILTIEQDIGEVRFDNLRVKLDELALESPNNQLKIYRMAGAKDIKVLPNDK EASPPQLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18738; Mature: 18738
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTRKDVLKEWYKRVAVTQAAHYYSADSLNNRKYWLGVPTVILTTLVGTSVFATVSQENT CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHEECCCCCH EAWVKICLGLASVIAALLASLQTFLGDSERSEKHRIAGAKYGALGRELEFILTIEQDIGE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHCCCCCCEEEEEEECHHCCC VRFDNLRVKLDELALESPNNQLKIYRMAGAKDIKVLPNDKEASPPQLA EEHHHHEEEHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MQTRKDVLKEWYKRVAVTQAAHYYSADSLNNRKYWLGVPTVILTTLVGTSVFATVSQENT CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHEECCCCCH EAWVKICLGLASVIAALLASLQTFLGDSERSEKHRIAGAKYGALGRELEFILTIEQDIGE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHCCCCCCEEEEEEECHHCCC VRFDNLRVKLDELALESPNNQLKIYRMAGAKDIKVLPNDKEASPPQLA EEHHHHEEEHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA