| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is exeK [H]
Identifier: 145300650
GI number: 145300650
Start: 4075108
End: 4076133
Strand: Direct
Name: exeK [H]
Synonym: ASA_3782
Alternate gene names: 145300650
Gene position: 4075108-4076133 (Clockwise)
Preceding gene: 145300649
Following gene: 145300651
Centisome position: 86.66
GC content: 60.92
Gene sequence:
>1026_bases ATGGCAACTAGGGGCAATCGGGGAGTGCACGCAGCCAGACCGGCTCGCCAGGGCGGCATGGCCCTGCTGGTGGTGCTGCT CATCTTGTCGGTGATGGTGATCATTGCCAGCAACATGAGCGGTCGCTTGCAGCTGGAACTGCGCCGCACCGGCAACCTCA CTGCCGGCAAGCAGGCATGGTGGTATGCCATGTCGGCGGAAGCCCTGGTGAGCAAGGTGCTGACTCAGGATTTCAAAGAC GATCCCAATGTGGTGAACCTGGGCCAGAACTGGGCCAGGCAGGATGCTGTCTTCCCGGTGGATGACGGCAAGCTGACCGG TCGGGTGCGGGATCTGCAATCCTGCTTCAACCTCAACAGCCTGAGCGTGCCCCTGAAAGACGGGGTGAGCGGCGATGACC TCGAGAAGCAGCCCTATCAGGTCAAGGCATTTCGCGCCCTGCTCAAGCAGCTCGAAGTCGAGGATTACGAGGCGGTGCAG CTGACCGACGCCATCCGCGACTGGACCGACAAGGATACGGCGCTGGTCTCCAGCTACGGTGCCGAAGATGCCTATTACGA AGGGCTGACGCCCCCTTATCTGACCGCGAACCAGTGGATGATCAGCACGGATGAGCTGAGGGCAGTGCGCGGTGTGAGTG CCAAACTGTATGCCCGGCTGGCGCCCTATGTGTGCGCCTTGCCGACCGACAAGCTGGTGGTGAACATCAACACCATCAAG CCGGAGCAGGCCGCGCTGCTGGTGGCGCTTTATCAGGACAAGATTGGTCTCGATGACGCCAAGCGGGTGCTGACCAGCCG CCCCCAGAAGGGGTGGAAGGATAAAAAAGCGATGACGGATCAGATGCCGGTGCAGGTGAGCACAATCATCGGGTTGGATA CGGCGCTGGACGTCAAGAGCAGCTATTTCGAAGCCAAATTGATCGCCGAAGTCGGTGATACCCGGGCCAGGCTGGAGAGT GTCTTCGTGCGTGGCAAGGACAACAAGCTGGTGATGCTGCGCCGCCTCAGCGGTGGCGCCGAATAA
Upstream 100 bases:
>100_bases AACGTGCTGCCTTACGGCCTGGCGGTGGAGCTGGATCTGGAGGATTACGGCACCATTCGCCGCCAGTTCCTGATAGGGGC CGGTGGCCAGCGAGCAGACA
Downstream 100 bases:
>100_bases CAAACAGGTGTGGGTGACGGCTGATGGCCGAACCCGCTCTGAATCCGTATTGGACAGCAGCCAAAGGCTGCGCTCCCGCC CATCTTCTGGATGCGGACGG
Product: general secretion pathway protein K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MATRGNRGVHAARPARQGGMALLVVLLILSVMVIIASNMSGRLQLELRRTGNLTAGKQAWWYAMSAEALVSKVLTQDFKD DPNVVNLGQNWARQDAVFPVDDGKLTGRVRDLQSCFNLNSLSVPLKDGVSGDDLEKQPYQVKAFRALLKQLEVEDYEAVQ LTDAIRDWTDKDTALVSSYGAEDAYYEGLTPPYLTANQWMISTDELRAVRGVSAKLYARLAPYVCALPTDKLVVNINTIK PEQAALLVALYQDKIGLDDAKRVLTSRPQKGWKDKKAMTDQMPVQVSTIIGLDTALDVKSSYFEAKLIAEVGDTRARLES VFVRGKDNKLVMLRRLSGGAE
Sequences:
>Translated_341_residues MATRGNRGVHAARPARQGGMALLVVLLILSVMVIIASNMSGRLQLELRRTGNLTAGKQAWWYAMSAEALVSKVLTQDFKD DPNVVNLGQNWARQDAVFPVDDGKLTGRVRDLQSCFNLNSLSVPLKDGVSGDDLEKQPYQVKAFRALLKQLEVEDYEAVQ LTDAIRDWTDKDTALVSSYGAEDAYYEGLTPPYLTANQWMISTDELRAVRGVSAKLYARLAPYVCALPTDKLVVNINTIK PEQAALLVALYQDKIGLDDAKRVLTSRPQKGWKDKKAMTDQMPVQVSTIIGLDTALDVKSSYFEAKLIAEVGDTRARLES VFVRGKDNKLVMLRRLSGGAE >Mature_340_residues ATRGNRGVHAARPARQGGMALLVVLLILSVMVIIASNMSGRLQLELRRTGNLTAGKQAWWYAMSAEALVSKVLTQDFKDD PNVVNLGQNWARQDAVFPVDDGKLTGRVRDLQSCFNLNSLSVPLKDGVSGDDLEKQPYQVKAFRALLKQLEVEDYEAVQL TDAIRDWTDKDTALVSSYGAEDAYYEGLTPPYLTANQWMISTDELRAVRGVSAKLYARLAPYVCALPTDKLVVNINTIKP EQAALLVALYQDKIGLDDAKRVLTSRPQKGWKDKKAMTDQMPVQVSTIIGLDTALDVKSSYFEAKLIAEVGDTRARLESV FVRGKDNKLVMLRRLSGGAE
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP K family [H]
Homologues:
Organism=Escherichia coli, GI1789729, Length=235, Percent_Identity=33.6170212765957, Blast_Score=136, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005628 [H]
Pfam domain/function: PF03934 GspK [H]
EC number: NA
Molecular weight: Translated: 37680; Mature: 37549
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRGNRGVHAARPARQGGMALLVVLLILSVMVIIASNMSGRLQLELRRTGNLTAGKQAW CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHH WYAMSAEALVSKVLTQDFKDDPNVVNLGQNWARQDAVFPVDDGKLTGRVRDLQSCFNLNS EEEHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCEEECCCCCHHHHHHHHHHHHCCCC LSVPLKDGVSGDDLEKQPYQVKAFRALLKQLEVEDYEAVQLTDAIRDWTDKDTALVSSYG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHCC AEDAYYEGLTPPYLTANQWMISTDELRAVRGVSAKLYARLAPYVCALPTDKLVVNINTIK CCCHHHCCCCCCEECCCCEEEEHHHHHHHHCCHHHHHHHHCCCEEECCCCEEEEEEECCC PEQAALLVALYQDKIGLDDAKRVLTSRPQKGWKDKKAMTDQMPVQVSTIIGLDTALDVKS CHHHHEEEEEHHCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEEECCCHHHHHHH SYFEAKLIAEVGDTRARLESVFVRGKDNKLVMLRRLSGGAE HHHHHHHHHHHCHHHHHHHHHHEECCCCCEEEEEECCCCCC >Mature Secondary Structure ATRGNRGVHAARPARQGGMALLVVLLILSVMVIIASNMSGRLQLELRRTGNLTAGKQAW CCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHH WYAMSAEALVSKVLTQDFKDDPNVVNLGQNWARQDAVFPVDDGKLTGRVRDLQSCFNLNS EEEHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCEEECCCCCHHHHHHHHHHHHCCCC LSVPLKDGVSGDDLEKQPYQVKAFRALLKQLEVEDYEAVQLTDAIRDWTDKDTALVSSYG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHCC AEDAYYEGLTPPYLTANQWMISTDELRAVRGVSAKLYARLAPYVCALPTDKLVVNINTIK CCCHHHCCCCCCEECCCCEEEEHHHHHHHHCCHHHHHHHHCCCEEECCCCEEEEEEECCC PEQAALLVALYQDKIGLDDAKRVLTSRPQKGWKDKKAMTDQMPVQVSTIIGLDTALDVKS CHHHHEEEEEHHCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEEECCCHHHHHHH SYFEAKLIAEVGDTRARLESVFVRGKDNKLVMLRRLSGGAE HHHHHHHHHHHCHHHHHHHHHHEECCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]