| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is exeL [H]
Identifier: 145300651
GI number: 145300651
Start: 4076236
End: 4077438
Strand: Direct
Name: exeL [H]
Synonym: ASA_3783
Alternate gene names: 145300651
Gene position: 4076236-4077438 (Clockwise)
Preceding gene: 145300650
Following gene: 145300652
Centisome position: 86.68
GC content: 64.51
Gene sequence:
>1203_bases ATGGCAGGAGAGATATTTGTGAGCGAGAGTCTGGTCATCCGTCTGGGGACCAATGCGCAGCAACCGGTCGAGTGGCTGGT GTGGTCGGCGAAGGAGGAGGAGATCATTGCCTCCGGTACCCTGGCCTCGGCCCATGCCCTCGGCGAGCTGCGGGAGCGTG CCGGTGGCCGCCCCGTGGTGACCCTGGTGCCGGGCAGCGACCTTATCTTCCGGCGGGTGAGCCTGCCGGGAAAATACAGT CGCCAGGCCGCGGCTGCCTTGCCCTATCTGCTGGAGGAGCAAATCGCCTCCGATGTGGATGAACTGTATCTGGTGGTGCT GGGCCACGAGGGCCACGATGTGGACCTGATGGCGGTCGACAAGGAGAAGATGCAGACTTGGCTGGGCTGGCTGGAGGCGG CGGGCCTCAAGAGCCAGCAACTGCTGCCGGACGTGCTGGCGCTGCCTCAGGCCGCCGACGGCTGGTCAGCCCTGCAACTG GGCAAGGAGTGGCTGCTGCGCCAGGGCCCTTGCCAGGGCATAGTGGCCGACGAGCCGCTGCTGGCCATGTTGCTGGCGGT CGAAGCCGAACCGGTTACCATCCACAGCCATACCCCGGTACCGCCGATCCCGAATGCTAACTGGCAGGCGGCGGATCCGG AACTGCCCATGCTGCTTCTGGCCAAAGGGGCGTTGAACTGTCAGGCCAACCTGTTGCAGGGCCCCTACCGGCCGCAAACC GAATACTCCCGTTACTGGTTGCAGTGGCGCAAGGTTGCCGTGGTTGCCGGCTTGCTGCTGTTGGTGGCGCTGACCCAGCG CGGTGTGCATCTCTATCAGCTGGCGGAGCAGGACAAGGCTCTCAAGGCAGAGATCCGGCAGGTCTACACCCGTATCTTCC CGGGGGAGACCCGCATCGTGAACGTGCGCAGCCAGATGGCGCAGCACCTCAAGTTGCTGGGGCAGACGCCGCAGGATGGT GTGCTTTTGTTGCTGACCGAACTGGCCCCCACCTTCGCCGAGGTGCCGGGTCTCAAGCCGCAGGTGCTGCGCTTCGACGC CGCCCGGGGCGAGCTTAGATTGCAGGTGACGGCACCCGGTTTCACCGAGATAGAGCGCTTTCGCGAGCTGGCGGGCAAGC GTTTCGAGGTGCAGCAGGGTGAGGTGCGCAGCACAGAAGGCAAGGTTGAAGGGGCACTGGTGCTGAAAGGTAAATCATCA TGA
Upstream 100 bases:
>100_bases AACAGGTGTGGGTGACGGCTGATGGCCGAACCCGCTCTGAATCCGTATTGGACAGCAGCCAAAGGCTGCGCTCCCGCCCA TCTTCTGGATGCGGACGGGA
Downstream 100 bases:
>100_bases TGGACAAACTACAAGGCTGGTGGCGCAGCATCAGCGCCCGCGAGCAGCGGCTGGTGGCAGTGGGTGGCAGCTGCCTGCTG ATCGGGCTCTTCTACTGGAT
Product: general secretion pathway protein L
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MAGEIFVSESLVIRLGTNAQQPVEWLVWSAKEEEIIASGTLASAHALGELRERAGGRPVVTLVPGSDLIFRRVSLPGKYS RQAAAALPYLLEEQIASDVDELYLVVLGHEGHDVDLMAVDKEKMQTWLGWLEAAGLKSQQLLPDVLALPQAADGWSALQL GKEWLLRQGPCQGIVADEPLLAMLLAVEAEPVTIHSHTPVPPIPNANWQAADPELPMLLLAKGALNCQANLLQGPYRPQT EYSRYWLQWRKVAVVAGLLLLVALTQRGVHLYQLAEQDKALKAEIRQVYTRIFPGETRIVNVRSQMAQHLKLLGQTPQDG VLLLLTELAPTFAEVPGLKPQVLRFDAARGELRLQVTAPGFTEIERFRELAGKRFEVQQGEVRSTEGKVEGALVLKGKSS
Sequences:
>Translated_400_residues MAGEIFVSESLVIRLGTNAQQPVEWLVWSAKEEEIIASGTLASAHALGELRERAGGRPVVTLVPGSDLIFRRVSLPGKYS RQAAAALPYLLEEQIASDVDELYLVVLGHEGHDVDLMAVDKEKMQTWLGWLEAAGLKSQQLLPDVLALPQAADGWSALQL GKEWLLRQGPCQGIVADEPLLAMLLAVEAEPVTIHSHTPVPPIPNANWQAADPELPMLLLAKGALNCQANLLQGPYRPQT EYSRYWLQWRKVAVVAGLLLLVALTQRGVHLYQLAEQDKALKAEIRQVYTRIFPGETRIVNVRSQMAQHLKLLGQTPQDG VLLLLTELAPTFAEVPGLKPQVLRFDAARGELRLQVTAPGFTEIERFRELAGKRFEVQQGEVRSTEGKVEGALVLKGKSS >Mature_399_residues AGEIFVSESLVIRLGTNAQQPVEWLVWSAKEEEIIASGTLASAHALGELRERAGGRPVVTLVPGSDLIFRRVSLPGKYSR QAAAALPYLLEEQIASDVDELYLVVLGHEGHDVDLMAVDKEKMQTWLGWLEAAGLKSQQLLPDVLALPQAADGWSALQLG KEWLLRQGPCQGIVADEPLLAMLLAVEAEPVTIHSHTPVPPIPNANWQAADPELPMLLLAKGALNCQANLLQGPYRPQTE YSRYWLQWRKVAVVAGLLLLVALTQRGVHLYQLAEQDKALKAEIRQVYTRIFPGETRIVNVRSQMAQHLKLLGQTPQDGV LLLLTELAPTFAEVPGLKPQVLRFDAARGELRLQVTAPGFTEIERFRELAGKRFEVQQGEVRSTEGKVEGALVLKGKSS
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3297
COG function: function code U; Type II secretory pathway, component PulL
Gene ontology:
Cell location: Cell inner membrane (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP L family [H]
Homologues:
Organism=Escherichia coli, GI87082244, Length=382, Percent_Identity=25.6544502617801, Blast_Score=101, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007812 [H]
Pfam domain/function: PF05134 GspL [H]
EC number: NA
Molecular weight: Translated: 43985; Mature: 43854
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGEIFVSESLVIRLGTNAQQPVEWLVWSAKEEEIIASGTLASAHALGELRERAGGRPVV CCCCEEECCCEEEEECCCCCCCHHHHEECCCCCCEEECCCHHHHHHHHHHHHHCCCCEEE TLVPGSDLIFRRVSLPGKYSRQAAAALPYLLEEQIASDVDELYLVVLGHEGHDVDLMAVD EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCEEEEEEC KEKMQTWLGWLEAAGLKSQQLLPDVLALPQAADGWSALQLGKEWLLRQGPCQGIVADEPL HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH LAMLLAVEAEPVTIHSHTPVPPIPNANWQAADPELPMLLLAKGALNCQANLLQGPYRPQT HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCH EYSRYWLQWRKVAVVAGLLLLVALTQRGVHLYQLAEQDKALKAEIRQVYTRIFPGETRIV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEE NVRSQMAQHLKLLGQTPQDGVLLLLTELAPTFAEVPGLKPQVLRFDAARGELRLQVTAPG EHHHHHHHHHHHHCCCCCCCCEEEHHHHCHHHHHCCCCCHHHEEEECCCCEEEEEEECCC FTEIERFRELAGKRFEVQQGEVRSTEGKVEGALVLKGKSS HHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure AGEIFVSESLVIRLGTNAQQPVEWLVWSAKEEEIIASGTLASAHALGELRERAGGRPVV CCCEEECCCEEEEECCCCCCCHHHHEECCCCCCEEECCCHHHHHHHHHHHHHCCCCEEE TLVPGSDLIFRRVSLPGKYSRQAAAALPYLLEEQIASDVDELYLVVLGHEGHDVDLMAVD EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCEEEEEEC KEKMQTWLGWLEAAGLKSQQLLPDVLALPQAADGWSALQLGKEWLLRQGPCQGIVADEPL HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH LAMLLAVEAEPVTIHSHTPVPPIPNANWQAADPELPMLLLAKGALNCQANLLQGPYRPQT HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCH EYSRYWLQWRKVAVVAGLLLLVALTQRGVHLYQLAEQDKALKAEIRQVYTRIFPGETRIV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEE NVRSQMAQHLKLLGQTPQDGVLLLLTELAPTFAEVPGLKPQVLRFDAARGELRLQVTAPG EHHHHHHHHHHHHCCCCCCCCEEEHHHHCHHHHHCCCCCHHHEEEECCCCEEEEEEECCC FTEIERFRELAGKRFEVQQGEVRSTEGKVEGALVLKGKSS HHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]