| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is oprC [C]
Identifier: 145300568
GI number: 145300568
Start: 3987539
End: 3989506
Strand: Direct
Name: oprC [C]
Synonym: ASA_3700
Alternate gene names: 145300568
Gene position: 3987539-3989506 (Clockwise)
Preceding gene: 145300567
Following gene: 145300569
Centisome position: 84.8
GC content: 64.33
Gene sequence:
>1968_bases ATGGCTCATTTTATGCGGACCCCTCTCGCCTTGCTGGTGGGCGGCCTCGCCTGCCACGGCGCAGCCGGTCAGGAGCAGGT GCAACGGCTGGAGCCCATGGTGGTGGTTGCCAGCCGCCCGACCAGCACTCTGGAAGTGACCCTGGATCCCAAGAAGCCGG GCTCCCCCATGCCTGCCGCCGATGGCGCCGGTTATCTGAAGAACGTCACCGGCATGAGCATGGTGCGCAAAGGGGGGCTG GGGGGCGATCCCGTGCTGCGGGGGATGGGCATGTCCCGCCTCAACGTGCAGATGGATGGCGGCATGCTGGCCGGTGGCTG TGGCGGTCGCATGGACCCGCCCACCGCCTATGTATTTCCCCAATCTTTCGACCGGATACGGGTGTTGAAAGGGCCGCAAT CCCTGGAGCAGGGTGCCACCCTGGCGGGAAGCGTGCTGTTCGAGCGAGACAGACCCGAGTTCAGTGCTCCCGGTGTCAAG GCTGAAGCCTCGGCGCTGTATGGCAGTTCCGGTCGTGACGACCAGATGCTGGATACCACCGTCGGCGCCCCCGAGGGCTA TCTGCGCGGCCAGTTCACTCACTCCGACAGCGATGACTACCGCGATGGTCACGGCGACAAGGTGCGCTCCTTCTATCGCC GGGAAAACGGCACGGCCCAGCTGGGCTGGACGCCGGGCGACAACACCCTGCTCGAGCTGACCGCCGAGCGCAGCAACGCC CGCGCCGCCTATGCGGATCGTATGATGGATGGCCCCATGTTCGACCGGGAGTCTTTCGGTCTCAAGTTCAAGCAGGAGGC GATCAGCCAGCAGTGGCGCCGCAGTGAGCTGACGCTGTGGGACAACGACATAGACCACATCATGGACAACTTCAGCCTGC GGCCAAACAGCGGCATCAAGATGCTTTCCAACCCGGATCGTCGCAATACCGGCGGCCGCTGGGCCAACGATATCGCCCTG CCGGCCGACTGGTTGCTGACCGCCGGACTCGATGCCAACCGGGATCAGCACAGGGCCCGCAGCGGTGTGGATTACGCCAG CCAGCCTCGCCAGCGTACTTTGCGATTCGAACAGCAAGGCTGGTTCAGCGAGCTGGGTCGCCAGCAGGGGTACCACAGCT ACAAGGGGGGTTATCGTCAGGATCGGGTGGAGACCACCAAATATGGCACCGGCGATCAGACCCTCTATAGCGACAAGCTG GTGCTCGACAGCGGCTTTGGCCGCTACGAATACCAGTGGTCGCCAGCCTGGTCGAGCTATCTGGCCTGGGGCCAGGCCGA GCGGGCACCGGATTACTGGGAGCGCAGCAAGGACAGCGTCCCCTTCACCCTCAACCCCGAGCGCAGCCGCCAGTGGGATG CCGGGCTGGCCCTGCGCAGCCGCGATCTGGATCTGACCCTCTCCCTGTTCAGTGCCGACATCAAGGACTACCTGCTCTAT CACAGCAAGTCGAACCAGGTGCGCAACATAGAGGCCCAGACCCGGGGCGGCGAGCTGGAAGGGCGCTGGCAGTTTGCCGA ACAGTGGCGCCTCGATGGTGGTCTGGCAGTGGTCTACGGCGAAAACCGGAGCGACAGCAAGCCGCTGGCCCAGATGCCGC CACTCGATGGCAAGCTGGCCCTGGGCTGGCAGCCGGATGAGGACTGGAGCTTTACGCTGCTGGGGCGCGCCGTCGCGGCC CAGAAGAGGGTAGATGTGGGATCTGGCACAGTGGCCGGTCAGGATCAGGGGGAGACACCTGGTTTCTTCACCATGAACCT GAGCGGTGCCTGGCAGGTGAGCGAAGGGTGGCAGTTGTCCGCAGGTATCGACAACCTGTTCGATACCTTCTACTACGAGC ACCTTTCCAAGTCGGTACACGCCAGCCAGGCGGGGCTGGGGTATGAGCAGATTGGTCGTATTCCCGAGCCGGGCCGCGCC TTCTGGCTGTCAGTCAACTATCGCTTCGCCTCTGCCGGCGTGCTTTGA
Upstream 100 bases:
>100_bases GCAGGCCTTTTTTACGGCCAGACGGCAAACCTTTCCCCTGCAGAAAGGTTTGTTGGTAGAGGTTAAAAAAACAAGATAAA CAGATAGATAAGGAAAATTC
Downstream 100 bases:
>100_bases ACCGGGTGTGTGCCAACTGCCAGTCAGAGAGGCTCTAACCGACTGAAGCGGGTAACGTTTTCAGTCACAGACCCGCAGTG GTGAGCTGGGTATCATGGCT
Product: outer membrane copper receptor OprC
Products: NA
Alternate protein names: NB-Dependent Receptor; NB Dependent Receptor; Outer Membrane Copper Receptor; Outer Membrane Protein C; Outer Membrane Copper Receptor OprC; Nb-Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Outer Membrane Protein OprC; Outer Membrane Protein; Outer Membrane Protein OprC Complement; NB-Dependent Receptor Plug; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; N-B Dependent Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; Membrane Receptor Protein; NB-Dependent Receptor Domain Protein; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 655; Mature: 654
Protein sequence:
>655_residues MAHFMRTPLALLVGGLACHGAAGQEQVQRLEPMVVVASRPTSTLEVTLDPKKPGSPMPAADGAGYLKNVTGMSMVRKGGL GGDPVLRGMGMSRLNVQMDGGMLAGGCGGRMDPPTAYVFPQSFDRIRVLKGPQSLEQGATLAGSVLFERDRPEFSAPGVK AEASALYGSSGRDDQMLDTTVGAPEGYLRGQFTHSDSDDYRDGHGDKVRSFYRRENGTAQLGWTPGDNTLLELTAERSNA RAAYADRMMDGPMFDRESFGLKFKQEAISQQWRRSELTLWDNDIDHIMDNFSLRPNSGIKMLSNPDRRNTGGRWANDIAL PADWLLTAGLDANRDQHRARSGVDYASQPRQRTLRFEQQGWFSELGRQQGYHSYKGGYRQDRVETTKYGTGDQTLYSDKL VLDSGFGRYEYQWSPAWSSYLAWGQAERAPDYWERSKDSVPFTLNPERSRQWDAGLALRSRDLDLTLSLFSADIKDYLLY HSKSNQVRNIEAQTRGGELEGRWQFAEQWRLDGGLAVVYGENRSDSKPLAQMPPLDGKLALGWQPDEDWSFTLLGRAVAA QKRVDVGSGTVAGQDQGETPGFFTMNLSGAWQVSEGWQLSAGIDNLFDTFYYEHLSKSVHASQAGLGYEQIGRIPEPGRA FWLSVNYRFASAGVL
Sequences:
>Translated_655_residues MAHFMRTPLALLVGGLACHGAAGQEQVQRLEPMVVVASRPTSTLEVTLDPKKPGSPMPAADGAGYLKNVTGMSMVRKGGL GGDPVLRGMGMSRLNVQMDGGMLAGGCGGRMDPPTAYVFPQSFDRIRVLKGPQSLEQGATLAGSVLFERDRPEFSAPGVK AEASALYGSSGRDDQMLDTTVGAPEGYLRGQFTHSDSDDYRDGHGDKVRSFYRRENGTAQLGWTPGDNTLLELTAERSNA RAAYADRMMDGPMFDRESFGLKFKQEAISQQWRRSELTLWDNDIDHIMDNFSLRPNSGIKMLSNPDRRNTGGRWANDIAL PADWLLTAGLDANRDQHRARSGVDYASQPRQRTLRFEQQGWFSELGRQQGYHSYKGGYRQDRVETTKYGTGDQTLYSDKL VLDSGFGRYEYQWSPAWSSYLAWGQAERAPDYWERSKDSVPFTLNPERSRQWDAGLALRSRDLDLTLSLFSADIKDYLLY HSKSNQVRNIEAQTRGGELEGRWQFAEQWRLDGGLAVVYGENRSDSKPLAQMPPLDGKLALGWQPDEDWSFTLLGRAVAA QKRVDVGSGTVAGQDQGETPGFFTMNLSGAWQVSEGWQLSAGIDNLFDTFYYEHLSKSVHASQAGLGYEQIGRIPEPGRA FWLSVNYRFASAGVL >Mature_654_residues AHFMRTPLALLVGGLACHGAAGQEQVQRLEPMVVVASRPTSTLEVTLDPKKPGSPMPAADGAGYLKNVTGMSMVRKGGLG GDPVLRGMGMSRLNVQMDGGMLAGGCGGRMDPPTAYVFPQSFDRIRVLKGPQSLEQGATLAGSVLFERDRPEFSAPGVKA EASALYGSSGRDDQMLDTTVGAPEGYLRGQFTHSDSDDYRDGHGDKVRSFYRRENGTAQLGWTPGDNTLLELTAERSNAR AAYADRMMDGPMFDRESFGLKFKQEAISQQWRRSELTLWDNDIDHIMDNFSLRPNSGIKMLSNPDRRNTGGRWANDIALP ADWLLTAGLDANRDQHRARSGVDYASQPRQRTLRFEQQGWFSELGRQQGYHSYKGGYRQDRVETTKYGTGDQTLYSDKLV LDSGFGRYEYQWSPAWSSYLAWGQAERAPDYWERSKDSVPFTLNPERSRQWDAGLALRSRDLDLTLSLFSADIKDYLLYH SKSNQVRNIEAQTRGGELEGRWQFAEQWRLDGGLAVVYGENRSDSKPLAQMPPLDGKLALGWQPDEDWSFTLLGRAVAAQ KRVDVGSGTVAGQDQGETPGFFTMNLSGAWQVSEGWQLSAGIDNLFDTFYYEHLSKSVHASQAGLGYEQIGRIPEPGRAF WLSVNYRFASAGVL
Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72699; Mature: 72568
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHFMRTPLALLVGGLACHGAAGQEQVQRLEPMVVVASRPTSTLEVTLDPKKPGSPMPAA CCCHHHCCHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCC DGAGYLKNVTGMSMVRKGGLGGDPVLRGMGMSRLNVQMDGGMLAGGCGGRMDPPTAYVFP CCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCEEECCCCCCCCCCEEEECC QSFDRIRVLKGPQSLEQGATLAGSVLFERDRPEFSAPGVKAEASALYGSSGRDDQMLDTT CCCCCEEEECCCHHHHHCCCEEEHEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHH VGAPEGYLRGQFTHSDSDDYRDGHGDKVRSFYRRENGTAQLGWTPGDNTLLELTAERSNA CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCC RAAYADRMMDGPMFDRESFGLKFKQEAISQQWRRSELTLWDNDIDHIMDNFSLRPNSGIK HHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHCCCCCCCCCCE MLSNPDRRNTGGRWANDIALPADWLLTAGLDANRDQHRARSGVDYASQPRQRTLRFEQQG ECCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCHHHHHHCCCCHHCCCHHHHHHHHHCC WFSELGRQQGYHSYKGGYRQDRVETTKYGTGDQTLYSDKLVLDSGFGRYEYQWSPAWSSY HHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCEEEEECCCHHHH LAWGQAERAPDYWERSKDSVPFTLNPERSRQWDAGLALRSRDLDLTLSLFSADIKDYLLY HHCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCEEECCCCEEEEHHHHHHHHHHHEE HSKSNQVRNIEAQTRGGELEGRWQFAEQWRLDGGLAVVYGENRSDSKPLAQMPPLDGKLA ECCCCCEEEEEHHCCCCCCCCEEHHHHHHCCCCCEEEEECCCCCCCCCHHHCCCCCCEEE LGWQPDEDWSFTLLGRAVAAQKRVDVGSGTVAGQDQGETPGFFTMNLSGAWQVSEGWQLS ECCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCEEE AGIDNLFDTFYYEHLSKSVHASQAGLGYEQIGRIPEPGRAFWLSVNYRFASAGVL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEEEEEECCCCC >Mature Secondary Structure AHFMRTPLALLVGGLACHGAAGQEQVQRLEPMVVVASRPTSTLEVTLDPKKPGSPMPAA CCHHHCCHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCC DGAGYLKNVTGMSMVRKGGLGGDPVLRGMGMSRLNVQMDGGMLAGGCGGRMDPPTAYVFP CCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCEEECCCCCCCCCCEEEECC QSFDRIRVLKGPQSLEQGATLAGSVLFERDRPEFSAPGVKAEASALYGSSGRDDQMLDTT CCCCCEEEECCCHHHHHCCCEEEHEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHH VGAPEGYLRGQFTHSDSDDYRDGHGDKVRSFYRRENGTAQLGWTPGDNTLLELTAERSNA CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCC RAAYADRMMDGPMFDRESFGLKFKQEAISQQWRRSELTLWDNDIDHIMDNFSLRPNSGIK HHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHCCCCCCCCCCE MLSNPDRRNTGGRWANDIALPADWLLTAGLDANRDQHRARSGVDYASQPRQRTLRFEQQG ECCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCHHHHHHCCCCHHCCCHHHHHHHHHCC WFSELGRQQGYHSYKGGYRQDRVETTKYGTGDQTLYSDKLVLDSGFGRYEYQWSPAWSSY HHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCEEEEECCCHHHH LAWGQAERAPDYWERSKDSVPFTLNPERSRQWDAGLALRSRDLDLTLSLFSADIKDYLLY HHCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCEEECCCCEEEEHHHHHHHHHHHEE HSKSNQVRNIEAQTRGGELEGRWQFAEQWRLDGGLAVVYGENRSDSKPLAQMPPLDGKLA ECCCCCEEEEEHHCCCCCCCCEEHHHHHHCCCCCEEEEECCCCCCCCCHHHCCCCCCEEE LGWQPDEDWSFTLLGRAVAAQKRVDVGSGTVAGQDQGETPGFFTMNLSGAWQVSEGWQLS ECCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCEEE AGIDNLFDTFYYEHLSKSVHASQAGLGYEQIGRIPEPGRAFWLSVNYRFASAGVL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA