Click here to switch to the map view.

The map label for this gene is tapT [H]

Identifier: 145300500

GI number: 145300500

Start: 3921306

End: 3922340

Strand: Direct

Name: tapT [H]

Synonym: ASA_3632

Alternate gene names: 145300500

Gene position: 3921306-3922340 (Clockwise)

Preceding gene: 145300494

Following gene: 145300501

Centisome position: 83.39

GC content: 58.74

Gene sequence:

>1035_bases
ATGGATATCACAGAGTTATTGGCTTTCAGTGTAAAGCATAAAGCCTCGGATCTACACCTCTCGGCCGGGGTTCCCCCGAT
GATCAGGGTTGATGGTGAGGTTCGCAAGATCAATTTACCCGCCCTGGAACACAGGGAAGTGCATGCCCTCATTTACGACA
TCATGAACGACCACCAGCGCAAGGAACTGGAAGAGAACTTCGAGGTCGACTTCTCGTTCGAAGTCCCCAATCTGGCCCGC
TTCCGGGTCAATGCCTTCCAGCAATCCCGCGGTTCGGGGGCCGTATTCCGTACCATCCCCAGCACGGTGCTGAGCCTGGA
GGATCTCGATGCCCCCGAAATCTTCCGCAAGATCTCCGAATACCCGCGCGGCCTGGTACTGGTGACAGGACCGACCGGCT
CGGGCAAGTCCACCACACTGGCGGCCATGGTCAACTACATCAACGAGAACTTCCATCACCACATACTCACCATCGAAGAC
CCCATCGAATTCGTGCACGAGAACAAACGCTGTCTGGTGAACCAGCGGGAAGTTCACAGGGACACCAAGAGCTTCAGCAA
CGCCCTGCGCTCGGCACTGCGGGAAGACCCGGACATCATACTGGTGGGCGAGATGCGTGACCTCGAGACCATTCGTCTGG
CAATGACGGCGGCCGAGACCGGCCATCTGGTATTCGGCACCCTGCACACCTCGTCGGCAGCCAAGACCATAGACCGGATC
ATCGACGTCTTCCCCGGTGCGGAAAAAGACATGGTGCGATCCATGCTCTCCGAATCCCTGCGGGCGGTTATCTCCCAGAC
CCTGCTCAAACGGATAGGCGGCGGCCGGGTGGCGGCCCACGAGATCATGATGGGCATACCCGCTGTGCGCAACCTCATAC
GGGAAGACAAGATCGCCCAGCTCTACTCCGTGATCCAGACCGGGATGACCCATGGCATGCAGACCATGGATCAGAGCCTC
AAGCAGCTGGTCAGCCGTGGTGTGGTCGCCTCACTCGATGCCAAGGCCAAGGCGGTCGACCCCAATAGCGTGTAA

Upstream 100 bases:

>100_bases
GGCGAGCGGCCTGTACAATACGTTCCTTTACCTGAAGCAGGTGCTGGGCAATCTGGCTCATATTTCGTTAGTGATCTTGT
GATGGGAGAATGACAAGTCT

Downstream 100 bases:

>100_bases
CCACAACGGAAAACGAATCTAAGGAAGGAGTCGTTATGAATCTGGATGCCCTGTTGGCCGAACTGGTCGCACGCAAAGGC
TCGGATCTGTTCATCACGGT

Product: type IV pilus protein TapT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MDITELLAFSVKHKASDLHLSAGVPPMIRVDGEVRKINLPALEHREVHALIYDIMNDHQRKELEENFEVDFSFEVPNLAR
FRVNAFQQSRGSGAVFRTIPSTVLSLEDLDAPEIFRKISEYPRGLVLVTGPTGSGKSTTLAAMVNYINENFHHHILTIED
PIEFVHENKRCLVNQREVHRDTKSFSNALRSALREDPDIILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPGAEKDMVRSMLSESLRAVISQTLLKRIGGGRVAAHEIMMGIPAVRNLIREDKIAQLYSVIQTGMTHGMQTMDQSL
KQLVSRGVVASLDAKAKAVDPNSV

Sequences:

>Translated_344_residues
MDITELLAFSVKHKASDLHLSAGVPPMIRVDGEVRKINLPALEHREVHALIYDIMNDHQRKELEENFEVDFSFEVPNLAR
FRVNAFQQSRGSGAVFRTIPSTVLSLEDLDAPEIFRKISEYPRGLVLVTGPTGSGKSTTLAAMVNYINENFHHHILTIED
PIEFVHENKRCLVNQREVHRDTKSFSNALRSALREDPDIILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPGAEKDMVRSMLSESLRAVISQTLLKRIGGGRVAAHEIMMGIPAVRNLIREDKIAQLYSVIQTGMTHGMQTMDQSL
KQLVSRGVVASLDAKAKAVDPNSV
>Mature_344_residues
MDITELLAFSVKHKASDLHLSAGVPPMIRVDGEVRKINLPALEHREVHALIYDIMNDHQRKELEENFEVDFSFEVPNLAR
FRVNAFQQSRGSGAVFRTIPSTVLSLEDLDAPEIFRKISEYPRGLVLVTGPTGSGKSTTLAAMVNYINENFHHHILTIED
PIEFVHENKRCLVNQREVHRDTKSFSNALRSALREDPDIILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPGAEKDMVRSMLSESLRAVISQTLLKRIGGGRVAAHEIMMGIPAVRNLIREDKIAQLYSVIQTGMTHGMQTMDQSL
KQLVSRGVVASLDAKAKAVDPNSV

Specific function: May be involved in pilus retraction [H]

COG id: COG2805

COG function: function code NU; Tfp pilus assembly protein, pilus retraction ATPase PilT

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI87082188, Length=327, Percent_Identity=48.0122324159021, Blast_Score=303, Evalue=8e-84,
Organism=Escherichia coli, GI1789723, Length=285, Percent_Identity=35.0877192982456, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1786296, Length=212, Percent_Identity=35.8490566037736, Blast_Score=120, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006321
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 38308; Mature: 38308

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDITELLAFSVKHKASDLHLSAGVPPMIRVDGEVRKINLPALEHREVHALIYDIMNDHQR
CCHHHHHHHHHHHCCCCEEECCCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHH
KELEENFEVDFSFEVPNLARFRVNAFQQSRGSGAVFRTIPSTVLSLEDLDAPEIFRKISE
HHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
YPRGLVLVTGPTGSGKSTTLAAMVNYINENFHHHILTIEDPIEFVHENKRCLVNQREVHR
CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCHHHCCHHHHHH
DTKSFSNALRSALREDPDIILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRI
HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
IDVFPGAEKDMVRSMLSESLRAVISQTLLKRIGGGRVAAHEIMMGIPAVRNLIREDKIAQ
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHH
LYSVIQTGMTHGMQTMDQSLKQLVSRGVVASLDAKAKAVDPNSV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MDITELLAFSVKHKASDLHLSAGVPPMIRVDGEVRKINLPALEHREVHALIYDIMNDHQR
CCHHHHHHHHHHHCCCCEEECCCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHH
KELEENFEVDFSFEVPNLARFRVNAFQQSRGSGAVFRTIPSTVLSLEDLDAPEIFRKISE
HHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
YPRGLVLVTGPTGSGKSTTLAAMVNYINENFHHHILTIEDPIEFVHENKRCLVNQREVHR
CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCHHHCCHHHHHH
DTKSFSNALRSALREDPDIILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRI
HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
IDVFPGAEKDMVRSMLSESLRAVISQTLLKRIGGGRVAAHEIMMGIPAVRNLIREDKIAQ
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHH
LYSVIQTGMTHGMQTMDQSLKQLVSRGVVASLDAKAKAVDPNSV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1676385; 10984043 [H]