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The map label for this gene is tapU [H]

Identifier: 145300501

GI number: 145300501

Start: 3922376

End: 3923485

Strand: Direct

Name: tapU [H]

Synonym: ASA_3633

Alternate gene names: 145300501

Gene position: 3922376-3923485 (Clockwise)

Preceding gene: 145300500

Following gene: 145300502

Centisome position: 83.41

GC content: 60.72

Gene sequence:

>1110_bases
ATGAATCTGGATGCCCTGTTGGCCGAACTGGTCGCACGCAAAGGCTCGGATCTGTTCATCACGGTTGGGACGCCCCCCAC
CCTCAAGATCAACGGGCATCTGGTCTCCCTCGGCAGCGAAGCGCTCGACAAGCAGAGCGCGCTGACCCTGGTCAGGGAGA
CGCTCAGCCCTGAGCATTTCGAGCGCTACATCCGCACCAGGGAGGGCAACTACGCCATCCACCGCGAGGCACTGGGACGC
TTTCGGGTGAGTGCCTTCTGGCAGCAGGAGCTGCCGGGCATGGTGGTGCGCCGTATCGAGACCCGCATTCCAACCTTCGA
CGAACTGACCCTGCCGCCCATCTTGCAGGAGGTGGCCATGGCCAAGCGCGGCCTGGTGCTGTTCGTCGGCGCCACCGGAA
CGGGCAAATCCACCACTCAGGCAGCCATGATCGGCTATCGAAACCAGAATGCGGATGGCCATATCCTGACGGTGGAAGAT
CCGGTGGAGTTCGTGCATCAGCACGGCCGCAGTCTGATCACCCAGCGGGAAGTGGGCATAGATACGGAATCATTCGATGT
GGCGCTGAAGAGCTCCCTGCGCCAGGCCCCTGACGTTATCCTCATCGGCGAGATCCGAAGCCAGGAAACCATGGAGTTCG
CACTGCAATTTGCCGAGACCGGCCATCTTTGCCTAGCGACCCTTCACGCCAACAATGCCAACCAGGCGCTGGATCGCATC
CTGCATCTGGTGCCGCAGGAGAAACACCGTCAGTTACTGTTCGATCTCTCCTTCAACCTGCGCGCCATCGTCGCCCAGCA
ACTGGTGCCAAGCCTGGATGGCCGCCGCCGCTTCGCGGCGTTTGAAGTGCTGCTCAACACGCCGCTCATCACGGATATCA
TCCGCAAAGGCGAGGTTCATCGCCTCAAAGAGGTGATGACCAAATCCACCGAGCTTGGCATGCAGACCTTCGATCAGGCG
CTGTTTACCCTGTTTTGTGCCGGCCAAATTGGCTACAGTGAGGCCCTTGCCCATGCCGACTCGGCCAACGACCTGCGACT
GCTGATCAAGCTGTCCGGCCGTGAGCAGATGGGTGCAGGCACACTCGACAACGTCACCCTGGATGAATGA

Upstream 100 bases:

>100_bases
TCAGCCGTGGTGTGGTCGCCTCACTCGATGCCAAGGCCAAGGCGGTCGACCCCAATAGCGTGTAACCACAACGGAAAACG
AATCTAAGGAAGGAGTCGTT

Downstream 100 bases:

>100_bases
GGGGCGTGTGTCACCGCTATAAAGGATCGTTATGCTGATTGTGGTTTCCCCGGCCAAGACGCTGGATTACGAGTCACCTC
TGGTGATCTCCCGTTTCACC

Product: type IV pilus protein TapU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MNLDALLAELVARKGSDLFITVGTPPTLKINGHLVSLGSEALDKQSALTLVRETLSPEHFERYIRTREGNYAIHREALGR
FRVSAFWQQELPGMVVRRIETRIPTFDELTLPPILQEVAMAKRGLVLFVGATGTGKSTTQAAMIGYRNQNADGHILTVED
PVEFVHQHGRSLITQREVGIDTESFDVALKSSLRQAPDVILIGEIRSQETMEFALQFAETGHLCLATLHANNANQALDRI
LHLVPQEKHRQLLFDLSFNLRAIVAQQLVPSLDGRRRFAAFEVLLNTPLITDIIRKGEVHRLKEVMTKSTELGMQTFDQA
LFTLFCAGQIGYSEALAHADSANDLRLLIKLSGREQMGAGTLDNVTLDE

Sequences:

>Translated_369_residues
MNLDALLAELVARKGSDLFITVGTPPTLKINGHLVSLGSEALDKQSALTLVRETLSPEHFERYIRTREGNYAIHREALGR
FRVSAFWQQELPGMVVRRIETRIPTFDELTLPPILQEVAMAKRGLVLFVGATGTGKSTTQAAMIGYRNQNADGHILTVED
PVEFVHQHGRSLITQREVGIDTESFDVALKSSLRQAPDVILIGEIRSQETMEFALQFAETGHLCLATLHANNANQALDRI
LHLVPQEKHRQLLFDLSFNLRAIVAQQLVPSLDGRRRFAAFEVLLNTPLITDIIRKGEVHRLKEVMTKSTELGMQTFDQA
LFTLFCAGQIGYSEALAHADSANDLRLLIKLSGREQMGAGTLDNVTLDE
>Mature_369_residues
MNLDALLAELVARKGSDLFITVGTPPTLKINGHLVSLGSEALDKQSALTLVRETLSPEHFERYIRTREGNYAIHREALGR
FRVSAFWQQELPGMVVRRIETRIPTFDELTLPPILQEVAMAKRGLVLFVGATGTGKSTTQAAMIGYRNQNADGHILTVED
PVEFVHQHGRSLITQREVGIDTESFDVALKSSLRQAPDVILIGEIRSQETMEFALQFAETGHLCLATLHANNANQALDRI
LHLVPQEKHRQLLFDLSFNLRAIVAQQLVPSLDGRRRFAAFEVLLNTPLITDIIRKGEVHRLKEVMTKSTELGMQTFDQA
LFTLFCAGQIGYSEALAHADSANDLRLLIKLSGREQMGAGTLDNVTLDE

Specific function: May be involved in pilus retraction [H]

COG id: COG5008

COG function: function code NU; Tfp pilus assembly protein, ATPase PilU

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI87082188, Length=321, Percent_Identity=38.6292834890966, Blast_Score=221, Evalue=4e-59,
Organism=Escherichia coli, GI1789723, Length=147, Percent_Identity=42.1768707482993, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786296, Length=254, Percent_Identity=32.6771653543307, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006321
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 41040; Mature: 41040

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDALLAELVARKGSDLFITVGTPPTLKINGHLVSLGSEALDKQSALTLVRETLSPEHF
CCHHHHHHHHHHCCCCCEEEEECCCCEEEECCEEEECCHHHHHHHHHHHHHHHHCCHHHH
ERYIRTREGNYAIHREALGRFRVSAFWQQELPGMVVRRIETRIPTFDELTLPPILQEVAM
HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
AKRGLVLFVGATGTGKSTTQAAMIGYRNQNADGHILTVEDPVEFVHQHGRSLITQREVGI
HHCCEEEEEECCCCCCCCHHHHHEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC
DTESFDVALKSSLRQAPDVILIGEIRSQETMEFALQFAETGHLCLATLHANNANQALDRI
CCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH
LHLVPQEKHRQLLFDLSFNLRAIVAQQLVPSLDGRRRFAAFEVLLNTPLITDIIRKGEVH
HHHCCCHHHHHEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHH
RLKEVMTKSTELGMQTFDQALFTLFCAGQIGYSEALAHADSANDLRLLIKLSGREQMGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCC
TLDNVTLDE
CCCCCCCCC
>Mature Secondary Structure
MNLDALLAELVARKGSDLFITVGTPPTLKINGHLVSLGSEALDKQSALTLVRETLSPEHF
CCHHHHHHHHHHCCCCCEEEEECCCCEEEECCEEEECCHHHHHHHHHHHHHHHHCCHHHH
ERYIRTREGNYAIHREALGRFRVSAFWQQELPGMVVRRIETRIPTFDELTLPPILQEVAM
HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
AKRGLVLFVGATGTGKSTTQAAMIGYRNQNADGHILTVEDPVEFVHQHGRSLITQREVGI
HHCCEEEEEECCCCCCCCHHHHHEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC
DTESFDVALKSSLRQAPDVILIGEIRSQETMEFALQFAETGHLCLATLHANNANQALDRI
CCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH
LHLVPQEKHRQLLFDLSFNLRAIVAQQLVPSLDGRRRFAAFEVLLNTPLITDIIRKGEVH
HHHCCCHHHHHEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHH
RLKEVMTKSTELGMQTFDQALFTLFCAGQIGYSEALAHADSANDLRLLIKLSGREQMGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCC
TLDNVTLDE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1676385; 10984043 [H]