| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300433
Identifier: 145300433
GI number: 145300433
Start: 3849669
End: 3851297
Strand: Direct
Name: 145300433
Synonym: ASA_3559
Alternate gene names: NA
Gene position: 3849669-3851297 (Clockwise)
Preceding gene: 145300432
Following gene: 145300435
Centisome position: 81.87
GC content: 60.83
Gene sequence:
>1629_bases ATGCAGATCCTTCTGATCGAAGACGATGCCATGCTCAGCTCGGCCCTCTCCCAAGGTCTGAGTGATCATGGCGTCACGCC ATCCCAACTGACCTATTGCAAGGAACTCTCCACACTATCCGCCCTGCTGCGTCAGCAGCCGTTCGACGCCATCATCTGCC GCCAGTATCGCCATCAGGCCCATGAGGGGATCCGCCTGCTGCAGGAGGCCCACTATCTGGGCCTGCTCGAACCTGGCTGT GTGCTCTTGCTGCTGGATGGGGACGATGAATTGCTCCAGTACCCCCCTTCCGAGCTCTATTTTCCACTGCACCTGTCCAT GCCCTTTACCACGGATCAGCTGACACGCAGTTTGCACGAACTGGTGTTGCTGACCGGGCTGACCCGACCCTTGCCCCCGT CAATGAAGCTCAGGGAGTGGCGCCTCGCCTGCTCCCTGTGCGAAGACCTGCTCTACCAGCAGCAGAAGAAAAACAAGGCG CTGGGCCCACTGCTGGACAGGGTCAAGGGTTACATGTTGCTGCAGGAGAAGGATCACTTCCAGGCCACCCAGCACTATGC CATGTGTACCACTGAACACGACGCCTGGTGGCCACGCAAGGGGCTGATCCACGCTCTGCTGGGGCTGAACAAGCTGGACA GCGCCCGCAAGGACCTGACCCGCAATCAGGAACGATTGCCGCCGACAATCCAGCTGGAACTGATGTTGGCCTGCCTGCTG CACGAGGCGCAGTGGGAATCAGCCTGGGAGGTACTCGGCAAGCTGCTGCAAAAACAGTCCTGGCAGCCGGAATGGCGTCA GGCGGCCATCTTGCTGGCCCTGCTGCTGAAAGATGAAGGGAAGGCGCTTGAACAGGCAAACGCGCTCAGCCTGCGATTTT TCAGTGAGCACAGGTTCCGCCTGTCTATCGAGAATTTCGTCCTGAATGCCAGTCTGGCCGTGCTCTGGCACTACCCCACG GCAGCCAGGATCAGTGCCCTGCAACAGGAGTTTGACTATCTCAGCAAGGCCGCCACCCTGCGGGCCCACGAGGCTGCATT GCTGCAGGCCCTTATGCTGGGTCTGGATTATCGCTTCGATGACGCCATAGTGCTGCTGGCCAAACACCCGCCAGAGGCGG CGCGGGACAATCATCTCAACCAGTTGCTCGGCTTTGCCGTCAGCCAGTTTTGCGGCCTGCCCCACCACGCCCAGCGCTAT CTGGCAAAGCTCGGCCAGTACCAGGCCAGAGTGGCACCGTCGCCGCTGCTCCAGCGGATGTTCAATCAAGTCGTCACTGA ACTCAAACTCCAGCTGGACCGCCGTGAGCAACGCCTGACCTACCTGCGCCAGGAACGGCAGCGGGCCAGCGCATCGGGTC AGCATCAGCTCGCAGTGCAATACGCCATGACACTGCAGGAAGAGTTCCCGGCTCTGCCGGGAGATGCCTGGCAACTGCTG GAGTTGCTGCAGCTGTGCTGGCCTGCCGGCATGCCCGCACCCAAGGTGGCACTTCTGGTTGATCGGCTGGAGCGGCGCCT GACCCACAGCGCCACCTTCATGGAGCACCATGCCGATGCGTACCAGAAGACCTTGCTGCAGATCAGATCACACCTGCACC CCAAGTCATCCTCTTCCCCGCCCAACTGA
Upstream 100 bases:
>100_bases ATTGACCAGAGTACAATTTACAGACAATAGTGAAAGCTCTTTTTGACTCCATCCCATGCCATACTTTTTCGTAACGTGAA CCAGCAAGGGAGCGCCAAGG
Downstream 100 bases:
>100_bases GCCCGCTGATGGCCGGGCTGGCGGACCTCGCAAGAAGCCCTCTTAAAACAGACCCCGCACCAGAATACCGGCGATCAGCA GCGGTGCGACCAGTCGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MQILLIEDDAMLSSALSQGLSDHGVTPSQLTYCKELSTLSALLRQQPFDAIICRQYRHQAHEGIRLLQEAHYLGLLEPGC VLLLLDGDDELLQYPPSELYFPLHLSMPFTTDQLTRSLHELVLLTGLTRPLPPSMKLREWRLACSLCEDLLYQQQKKNKA LGPLLDRVKGYMLLQEKDHFQATQHYAMCTTEHDAWWPRKGLIHALLGLNKLDSARKDLTRNQERLPPTIQLELMLACLL HEAQWESAWEVLGKLLQKQSWQPEWRQAAILLALLLKDEGKALEQANALSLRFFSEHRFRLSIENFVLNASLAVLWHYPT AARISALQQEFDYLSKAATLRAHEAALLQALMLGLDYRFDDAIVLLAKHPPEAARDNHLNQLLGFAVSQFCGLPHHAQRY LAKLGQYQARVAPSPLLQRMFNQVVTELKLQLDRREQRLTYLRQERQRASASGQHQLAVQYAMTLQEEFPALPGDAWQLL ELLQLCWPAGMPAPKVALLVDRLERRLTHSATFMEHHADAYQKTLLQIRSHLHPKSSSSPPN
Sequences:
>Translated_542_residues MQILLIEDDAMLSSALSQGLSDHGVTPSQLTYCKELSTLSALLRQQPFDAIICRQYRHQAHEGIRLLQEAHYLGLLEPGC VLLLLDGDDELLQYPPSELYFPLHLSMPFTTDQLTRSLHELVLLTGLTRPLPPSMKLREWRLACSLCEDLLYQQQKKNKA LGPLLDRVKGYMLLQEKDHFQATQHYAMCTTEHDAWWPRKGLIHALLGLNKLDSARKDLTRNQERLPPTIQLELMLACLL HEAQWESAWEVLGKLLQKQSWQPEWRQAAILLALLLKDEGKALEQANALSLRFFSEHRFRLSIENFVLNASLAVLWHYPT AARISALQQEFDYLSKAATLRAHEAALLQALMLGLDYRFDDAIVLLAKHPPEAARDNHLNQLLGFAVSQFCGLPHHAQRY LAKLGQYQARVAPSPLLQRMFNQVVTELKLQLDRREQRLTYLRQERQRASASGQHQLAVQYAMTLQEEFPALPGDAWQLL ELLQLCWPAGMPAPKVALLVDRLERRLTHSATFMEHHADAYQKTLLQIRSHLHPKSSSSPPN >Mature_542_residues MQILLIEDDAMLSSALSQGLSDHGVTPSQLTYCKELSTLSALLRQQPFDAIICRQYRHQAHEGIRLLQEAHYLGLLEPGC VLLLLDGDDELLQYPPSELYFPLHLSMPFTTDQLTRSLHELVLLTGLTRPLPPSMKLREWRLACSLCEDLLYQQQKKNKA LGPLLDRVKGYMLLQEKDHFQATQHYAMCTTEHDAWWPRKGLIHALLGLNKLDSARKDLTRNQERLPPTIQLELMLACLL HEAQWESAWEVLGKLLQKQSWQPEWRQAAILLALLLKDEGKALEQANALSLRFFSEHRFRLSIENFVLNASLAVLWHYPT AARISALQQEFDYLSKAATLRAHEAALLQALMLGLDYRFDDAIVLLAKHPPEAARDNHLNQLLGFAVSQFCGLPHHAQRY LAKLGQYQARVAPSPLLQRMFNQVVTELKLQLDRREQRLTYLRQERQRASASGQHQLAVQYAMTLQEEFPALPGDAWQLL ELLQLCWPAGMPAPKVALLVDRLERRLTHSATFMEHHADAYQKTLLQIRSHLHPKSSSSPPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62012; Mature: 62012
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQILLIEDDAMLSSALSQGLSDHGVTPSQLTYCKELSTLSALLRQQPFDAIICRQYRHQA CEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH HEGIRLLQEAHYLGLLEPGCVLLLLDGDDELLQYPPSELYFPLHLSMPFTTDQLTRSLHE HHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHH LVLLTGLTRPLPPSMKLREWRLACSLCEDLLYQQQKKNKALGPLLDRVKGYMLLQEKDHF HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCHHH QATQHYAMCTTEHDAWWPRKGLIHALLGLNKLDSARKDLTRNQERLPPTIQLELMLACLL HHHHHHHEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH HEAQWESAWEVLGKLLQKQSWQPEWRQAAILLALLLKDEGKALEQANALSLRFFSEHRFR HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHEEEECCCCCE LSIENFVLNASLAVLWHYPTAARISALQQEFDYLSKAATLRAHEAALLQALMLGLDYRFD EEHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DAIVLLAKHPPEAARDNHLNQLLGFAVSQFCGLPHHAQRYLAKLGQYQARVAPSPLLQRM CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH FNQVVTELKLQLDRREQRLTYLRQERQRASASGQHQLAVQYAMTLQEEFPALPGDAWQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH ELLQLCWPAGMPAPKVALLVDRLERRLTHSATFMEHHADAYQKTLLQIRSHLHPKSSSSP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PN CC >Mature Secondary Structure MQILLIEDDAMLSSALSQGLSDHGVTPSQLTYCKELSTLSALLRQQPFDAIICRQYRHQA CEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH HEGIRLLQEAHYLGLLEPGCVLLLLDGDDELLQYPPSELYFPLHLSMPFTTDQLTRSLHE HHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHH LVLLTGLTRPLPPSMKLREWRLACSLCEDLLYQQQKKNKALGPLLDRVKGYMLLQEKDHF HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCHHH QATQHYAMCTTEHDAWWPRKGLIHALLGLNKLDSARKDLTRNQERLPPTIQLELMLACLL HHHHHHHEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH HEAQWESAWEVLGKLLQKQSWQPEWRQAAILLALLLKDEGKALEQANALSLRFFSEHRFR HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHEEEECCCCCE LSIENFVLNASLAVLWHYPTAARISALQQEFDYLSKAATLRAHEAALLQALMLGLDYRFD EEHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DAIVLLAKHPPEAARDNHLNQLLGFAVSQFCGLPHHAQRYLAKLGQYQARVAPSPLLQRM CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH FNQVVTELKLQLDRREQRLTYLRQERQRASASGQHQLAVQYAMTLQEEFPALPGDAWQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH ELLQLCWPAGMPAPKVALLVDRLERRLTHSATFMEHHADAYQKTLLQIRSHLHPKSSSSP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA