| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300435
Identifier: 145300435
GI number: 145300435
Start: 3853021
End: 3853788
Strand: Direct
Name: 145300435
Synonym: ASA_3561
Alternate gene names: NA
Gene position: 3853021-3853788 (Clockwise)
Preceding gene: 145300433
Following gene: 145300438
Centisome position: 81.94
GC content: 55.73
Gene sequence:
>768_bases ATGAAACGAACTCTGCTCATCGGAGCACTCTTCAGCCTCAGCCTGACACTGTCGGCACAACCCTCGCTGACCCTGCTCAG CCATGAACTCGTCCCCTTCACTCACCACCATGATGGCAAGCTCGACGGGCTCGCCGTTCGCCTGATCCAGCAAATACAAG ATGAACTGGGAGAAACGTATCCCATCCGGATTTACCCCTTCAAACGGGCCCTGGCACTGACCAGACTGGAGCCAGGATAT GCGCTGTTTGTTACCCAGTGGGCACCCGAGAGAGAACCCTTCTTTAAATGGGTAGGACCACTGTTTCGGAGCAAGGTGAT CATCTATCAGCCCCCGTCACCCAGACACAAACTGAAGAACCTCGACGACTTGCGTCACTTGCCAAGGGTCGGGGTTGTGC TCGGTAATGCCGATGACGAACGACTCACCCGCGAGGGATATACCAATCTGGTGCGCTACCAATCGGTTGAGGAAGCCTTG CAACGCTTGGTACTGGGCAAAATTGATGCATTTCCGGTAGGTGAAATGGTGCTGGATGCCACCTTGGAACAGCGAGGGTT ATCACATCGCAGCGTGACAAACTCGGGGGTAGTGCTTCATGAGTCATGGCTCTACCTCGCCTTTTCCAGGGATCAGGATG ATGCCGTCATAGCCCGTTGGCAGTCCGCGCTCGACAAGGTCAGGTTGAAAAGTGGGAGGGGCATGCTGCCCCCCCATCAA GATCGAACCTCACATCAAGCCGCGCAGCAGGATCCCGCCGATCAGTAA
Upstream 100 bases:
>100_bases CCCATTGAAAACCCTATATTTATCAATCAGGGACGCCCTGTTGACCATGATAATGTCACCCCTGCGGCCACTTGATTCAG CATATGCAACAGGACAGCGC
Downstream 100 bases:
>100_bases GGGGGCCAGCCAGCGCCAGCAACCCATCACCAGGGTCCGCCAGTGCTGAGCCAAGCCCTGGGGCAGAGCTCGCTGACCCA GCTTCCAGCCCAGCAACAGG
Product: ABC-type transporter, periplasmic binding protein
Products: NA
Alternate protein names: ABC-Type Amino Acid Transporter
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKRTLLIGALFSLSLTLSAQPSLTLLSHELVPFTHHHDGKLDGLAVRLIQQIQDELGETYPIRIYPFKRALALTRLEPGY ALFVTQWAPEREPFFKWVGPLFRSKVIIYQPPSPRHKLKNLDDLRHLPRVGVVLGNADDERLTREGYTNLVRYQSVEEAL QRLVLGKIDAFPVGEMVLDATLEQRGLSHRSVTNSGVVLHESWLYLAFSRDQDDAVIARWQSALDKVRLKSGRGMLPPHQ DRTSHQAAQQDPADQ
Sequences:
>Translated_255_residues MKRTLLIGALFSLSLTLSAQPSLTLLSHELVPFTHHHDGKLDGLAVRLIQQIQDELGETYPIRIYPFKRALALTRLEPGY ALFVTQWAPEREPFFKWVGPLFRSKVIIYQPPSPRHKLKNLDDLRHLPRVGVVLGNADDERLTREGYTNLVRYQSVEEAL QRLVLGKIDAFPVGEMVLDATLEQRGLSHRSVTNSGVVLHESWLYLAFSRDQDDAVIARWQSALDKVRLKSGRGMLPPHQ DRTSHQAAQQDPADQ >Mature_255_residues MKRTLLIGALFSLSLTLSAQPSLTLLSHELVPFTHHHDGKLDGLAVRLIQQIQDELGETYPIRIYPFKRALALTRLEPGY ALFVTQWAPEREPFFKWVGPLFRSKVIIYQPPSPRHKLKNLDDLRHLPRVGVVLGNADDERLTREGYTNLVRYQSVEEAL QRLVLGKIDAFPVGEMVLDATLEQRGLSHRSVTNSGVVLHESWLYLAFSRDQDDAVIARWQSALDKVRLKSGRGMLPPHQ DRTSHQAAQQDPADQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28982; Mature: 28982
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTLLIGALFSLSLTLSAQPSLTLLSHELVPFTHHHDGKLDGLAVRLIQQIQDELGETY CCCEEEEEEHHHHEEEECCCCCEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC PIRIYPFKRALALTRLEPGYALFVTQWAPEREPFFKWVGPLFRSKVIIYQPPSPRHKLKN CEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHCC LDDLRHLPRVGVVLGNADDERLTREGYTNLVRYQSVEEALQRLVLGKIDAFPVGEMVLDA HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TLEQRGLSHRSVTNSGVVLHESWLYLAFSRDQDDAVIARWQSALDKVRLKSGRGMLPPHQ HHHHHCCCCCCCCCCCEEEEECEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC DRTSHQAAQQDPADQ CCHHHHHHCCCCCCC >Mature Secondary Structure MKRTLLIGALFSLSLTLSAQPSLTLLSHELVPFTHHHDGKLDGLAVRLIQQIQDELGETY CCCEEEEEEHHHHEEEECCCCCEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC PIRIYPFKRALALTRLEPGYALFVTQWAPEREPFFKWVGPLFRSKVIIYQPPSPRHKLKN CEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHCC LDDLRHLPRVGVVLGNADDERLTREGYTNLVRYQSVEEALQRLVLGKIDAFPVGEMVLDA HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TLEQRGLSHRSVTNSGVVLHESWLYLAFSRDQDDAVIARWQSALDKVRLKSGRGMLPPHQ HHHHHCCCCCCCCCCCEEEEECEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC DRTSHQAAQQDPADQ CCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA