Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

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The map label for this gene is 145300435

Identifier: 145300435

GI number: 145300435

Start: 3853021

End: 3853788

Strand: Direct

Name: 145300435

Synonym: ASA_3561

Alternate gene names: NA

Gene position: 3853021-3853788 (Clockwise)

Preceding gene: 145300433

Following gene: 145300438

Centisome position: 81.94

GC content: 55.73

Gene sequence:

>768_bases
ATGAAACGAACTCTGCTCATCGGAGCACTCTTCAGCCTCAGCCTGACACTGTCGGCACAACCCTCGCTGACCCTGCTCAG
CCATGAACTCGTCCCCTTCACTCACCACCATGATGGCAAGCTCGACGGGCTCGCCGTTCGCCTGATCCAGCAAATACAAG
ATGAACTGGGAGAAACGTATCCCATCCGGATTTACCCCTTCAAACGGGCCCTGGCACTGACCAGACTGGAGCCAGGATAT
GCGCTGTTTGTTACCCAGTGGGCACCCGAGAGAGAACCCTTCTTTAAATGGGTAGGACCACTGTTTCGGAGCAAGGTGAT
CATCTATCAGCCCCCGTCACCCAGACACAAACTGAAGAACCTCGACGACTTGCGTCACTTGCCAAGGGTCGGGGTTGTGC
TCGGTAATGCCGATGACGAACGACTCACCCGCGAGGGATATACCAATCTGGTGCGCTACCAATCGGTTGAGGAAGCCTTG
CAACGCTTGGTACTGGGCAAAATTGATGCATTTCCGGTAGGTGAAATGGTGCTGGATGCCACCTTGGAACAGCGAGGGTT
ATCACATCGCAGCGTGACAAACTCGGGGGTAGTGCTTCATGAGTCATGGCTCTACCTCGCCTTTTCCAGGGATCAGGATG
ATGCCGTCATAGCCCGTTGGCAGTCCGCGCTCGACAAGGTCAGGTTGAAAAGTGGGAGGGGCATGCTGCCCCCCCATCAA
GATCGAACCTCACATCAAGCCGCGCAGCAGGATCCCGCCGATCAGTAA

Upstream 100 bases:

>100_bases
CCCATTGAAAACCCTATATTTATCAATCAGGGACGCCCTGTTGACCATGATAATGTCACCCCTGCGGCCACTTGATTCAG
CATATGCAACAGGACAGCGC

Downstream 100 bases:

>100_bases
GGGGGCCAGCCAGCGCCAGCAACCCATCACCAGGGTCCGCCAGTGCTGAGCCAAGCCCTGGGGCAGAGCTCGCTGACCCA
GCTTCCAGCCCAGCAACAGG

Product: ABC-type transporter, periplasmic binding protein

Products: NA

Alternate protein names: ABC-Type Amino Acid Transporter

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKRTLLIGALFSLSLTLSAQPSLTLLSHELVPFTHHHDGKLDGLAVRLIQQIQDELGETYPIRIYPFKRALALTRLEPGY
ALFVTQWAPEREPFFKWVGPLFRSKVIIYQPPSPRHKLKNLDDLRHLPRVGVVLGNADDERLTREGYTNLVRYQSVEEAL
QRLVLGKIDAFPVGEMVLDATLEQRGLSHRSVTNSGVVLHESWLYLAFSRDQDDAVIARWQSALDKVRLKSGRGMLPPHQ
DRTSHQAAQQDPADQ

Sequences:

>Translated_255_residues
MKRTLLIGALFSLSLTLSAQPSLTLLSHELVPFTHHHDGKLDGLAVRLIQQIQDELGETYPIRIYPFKRALALTRLEPGY
ALFVTQWAPEREPFFKWVGPLFRSKVIIYQPPSPRHKLKNLDDLRHLPRVGVVLGNADDERLTREGYTNLVRYQSVEEAL
QRLVLGKIDAFPVGEMVLDATLEQRGLSHRSVTNSGVVLHESWLYLAFSRDQDDAVIARWQSALDKVRLKSGRGMLPPHQ
DRTSHQAAQQDPADQ
>Mature_255_residues
MKRTLLIGALFSLSLTLSAQPSLTLLSHELVPFTHHHDGKLDGLAVRLIQQIQDELGETYPIRIYPFKRALALTRLEPGY
ALFVTQWAPEREPFFKWVGPLFRSKVIIYQPPSPRHKLKNLDDLRHLPRVGVVLGNADDERLTREGYTNLVRYQSVEEAL
QRLVLGKIDAFPVGEMVLDATLEQRGLSHRSVTNSGVVLHESWLYLAFSRDQDDAVIARWQSALDKVRLKSGRGMLPPHQ
DRTSHQAAQQDPADQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28982; Mature: 28982

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLLIGALFSLSLTLSAQPSLTLLSHELVPFTHHHDGKLDGLAVRLIQQIQDELGETY
CCCEEEEEEHHHHEEEECCCCCEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PIRIYPFKRALALTRLEPGYALFVTQWAPEREPFFKWVGPLFRSKVIIYQPPSPRHKLKN
CEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHCC
LDDLRHLPRVGVVLGNADDERLTREGYTNLVRYQSVEEALQRLVLGKIDAFPVGEMVLDA
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TLEQRGLSHRSVTNSGVVLHESWLYLAFSRDQDDAVIARWQSALDKVRLKSGRGMLPPHQ
HHHHHCCCCCCCCCCCEEEEECEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
DRTSHQAAQQDPADQ
CCHHHHHHCCCCCCC
>Mature Secondary Structure
MKRTLLIGALFSLSLTLSAQPSLTLLSHELVPFTHHHDGKLDGLAVRLIQQIQDELGETY
CCCEEEEEEHHHHEEEECCCCCEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PIRIYPFKRALALTRLEPGYALFVTQWAPEREPFFKWVGPLFRSKVIIYQPPSPRHKLKN
CEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHCC
LDDLRHLPRVGVVLGNADDERLTREGYTNLVRYQSVEEALQRLVLGKIDAFPVGEMVLDA
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TLEQRGLSHRSVTNSGVVLHESWLYLAFSRDQDDAVIARWQSALDKVRLKSGRGMLPPHQ
HHHHHCCCCCCCCCCCEEEEECEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
DRTSHQAAQQDPADQ
CCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA