| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
Click here to switch to the map view.
The map label for this gene is zntR [C]
Identifier: 145300419
GI number: 145300419
Start: 3833604
End: 3833981
Strand: Direct
Name: zntR [C]
Synonym: ASA_3544
Alternate gene names: 145300419
Gene position: 3833604-3833981 (Clockwise)
Preceding gene: 145300418
Following gene: 145300420
Centisome position: 81.52
GC content: 62.7
Gene sequence:
>378_bases ATGTATATCGGCGAATTTGCCCGGCTGGCGGGCACCACTCCCAAGGCGATCCGCCTCTACGAACAGATGGGGCTGCTGCC CGAACCCAGGCGGCACGGCAAGTATCGCGTCTACCGTGCGGAAGACTTGGAGTGGGTCGGGTTTATTCGCCAGGCCCAGC AGCTGGGTTGCAAACTGAGTGAGCTCACCCCTCTGCTGGCCGGCATGACCGACATGGCGCAGTTTCCCTGGCAGAAGGTG GAACGCCTTATCGCCGACAAGCTGGCGCAGATCGGCGAGGAGCAGGCCCGTTTACAGCGCCAGTATCAAGCCCTGACCCA GTGCGCTGCGCTACTGCAACAGCATCCCTGCCGCACGCCACTCCTCCAGCCAGACTAA
Upstream 100 bases:
>100_bases CAAGGTGGGTGCCCCCTCTCCCCTCCCCATCGGGGATTCAATCCCGCCAGCCACTGACCTATAGTGAGCCCCTACTCGAA CAACCTTTGCGAGCAGCAAT
Downstream 100 bases:
>100_bases GCCCGGGCAAGCGCCCTTCGATGGCAAGCCAGTCGCCCTGACCATCGACCTCATCAAAGAGGGCCGCTGCGCCCCTTGAC TCTGTCCCATGGGACAGAGG
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; MerR Family Regulatory Protein
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MYIGEFARLAGTTPKAIRLYEQMGLLPEPRRHGKYRVYRAEDLEWVGFIRQAQQLGCKLSELTPLLAGMTDMAQFPWQKV ERLIADKLAQIGEEQARLQRQYQALTQCAALLQQHPCRTPLLQPD
Sequences:
>Translated_125_residues MYIGEFARLAGTTPKAIRLYEQMGLLPEPRRHGKYRVYRAEDLEWVGFIRQAQQLGCKLSELTPLLAGMTDMAQFPWQKV ERLIADKLAQIGEEQARLQRQYQALTQCAALLQQHPCRTPLLQPD >Mature_125_residues MYIGEFARLAGTTPKAIRLYEQMGLLPEPRRHGKYRVYRAEDLEWVGFIRQAQQLGCKLSELTPLLAGMTDMAQFPWQKV ERLIADKLAQIGEEQARLQRQYQALTQCAALLQQHPCRTPLLQPD
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789687, Length=107, Percent_Identity=34.5794392523364, Blast_Score=61, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14411; Mature: 14411
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIGEFARLAGTTPKAIRLYEQMGLLPEPRRHGKYRVYRAEDLEWVGFIRQAQQLGCKLS CCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHH ELTPLLAGMTDMAQFPWQKVERLIADKLAQIGEEQARLQRQYQALTQCAALLQQHPCRTP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LLQPD CCCCC >Mature Secondary Structure MYIGEFARLAGTTPKAIRLYEQMGLLPEPRRHGKYRVYRAEDLEWVGFIRQAQQLGCKLS CCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHH ELTPLLAGMTDMAQFPWQKVERLIADKLAQIGEEQARLQRQYQALTQCAALLQQHPCRTP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LLQPD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA