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The map label for this gene is ycaK [C]

Identifier: 145300420

GI number: 145300420

Start: 3834118

End: 3834726

Strand: Direct

Name: ycaK [C]

Synonym: ASA_3545

Alternate gene names: 145300420

Gene position: 3834118-3834726 (Clockwise)

Preceding gene: 145300419

Following gene: 145300430

Centisome position: 81.54

GC content: 66.34

Gene sequence:

>609_bases
ATGCCACCCCGTCTGCTTGTCATCAACGGCAATCCCAAACCCGACAGCTTCTGCCATGCCCTGGCCCGCGAGTATGCTCG
CAGCGCTGAGGAGGCTGGCGCAGAGGTCACACTGCTGCACGTGGGGGAGCTGGCCTTCGAGCCGGACTTGCGCCATGGCT
ATGACCTTATGCCGCCGCTGGAGCCGGATCTGCTGGCGTTGCAACAGAGTCTGAGTGCCGCCCATCATCTGGTGATCGTC
TCCCCCCTCTGGTGGGGCAACATGCCGGCCCGTCTCAAGGGTCTGCTGGATCGCACCCTGCTCTCCGGCTTCGCCTTTCA
ATATGTCAAGGGCAAGGCCCTGCCCCTGCGCCTGCGCCTGCTCGCGGGCAAGACGGCGCGCCTGCTGCTCACCATGGACA
GCCCAGTCTGGTATTACCGCTGGTGGCTGGGGGATCCCGCCTCACGCATCCTCGACAAACAGGTACTGGGGCTGTGCGGT
ATCCGGCTCACCCACCGCCAATACCTGGGCCCCATGCACACAGCCCGCGATCAGGACAGGGCCCGCTGGCTGACGCGCAC
CGGTGCGGCGGCCCGCGCCGATGTGCGCCGGCTAAGTCGCCGCACATGA

Upstream 100 bases:

>100_bases
CCTGACCATCGACCTCATCAAAGAGGGCCGCTGCGCCCCTTGACTCTGTCCCATGGGACAGAGGGTCTAATACGGGCTCA
CCCCATCAGGAGCCCTGACC

Downstream 100 bases:

>100_bases
AAAAGCCCCGCATTGCGGGGCTGCTTGTTATTGGCGGTGGCCGACTCAGTTGACGGCGACCGGCTCGCTCATGCTGGCGG
GCGGCGGGGTTTGAAACTCG

Product: NADPH-quinone reductase

Products: NA

Alternate protein names: NAD(P)H Dehydrogenase Quinone Family; Oxidoreductase; NADPH-Quinone Reductase; NAD(P)H Dehydrogenase Protein; Flavodoxin-Like Fold Subfamily; Quinone Family NAD(P)H Dehydrogenase; NADPH-Dependent FMN Reductase; Flavodoxin-Like Fold Protein; NAD(P)H Oxidoreductase; Quinone Family Oxidoreductase/NAD(P)H Dehydrogenase; Flavodoxin Containing Oxidoreductase; NAD(P)H Quinone Oxidoreductase; NADPH-Quinone Reductase YabF Family

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MPPRLLVINGNPKPDSFCHALAREYARSAEEAGAEVTLLHVGELAFEPDLRHGYDLMPPLEPDLLALQQSLSAAHHLVIV
SPLWWGNMPARLKGLLDRTLLSGFAFQYVKGKALPLRLRLLAGKTARLLLTMDSPVWYYRWWLGDPASRILDKQVLGLCG
IRLTHRQYLGPMHTARDQDRARWLTRTGAAARADVRRLSRRT

Sequences:

>Translated_202_residues
MPPRLLVINGNPKPDSFCHALAREYARSAEEAGAEVTLLHVGELAFEPDLRHGYDLMPPLEPDLLALQQSLSAAHHLVIV
SPLWWGNMPARLKGLLDRTLLSGFAFQYVKGKALPLRLRLLAGKTARLLLTMDSPVWYYRWWLGDPASRILDKQVLGLCG
IRLTHRQYLGPMHTARDQDRARWLTRTGAAARADVRRLSRRT
>Mature_201_residues
PPRLLVINGNPKPDSFCHALAREYARSAEEAGAEVTLLHVGELAFEPDLRHGYDLMPPLEPDLLALQQSLSAAHHLVIVS
PLWWGNMPARLKGLLDRTLLSGFAFQYVKGKALPLRLRLLAGKTARLLLTMDSPVWYYRWWLGDPASRILDKQVLGLCGI
RLTHRQYLGPMHTARDQDRARWLTRTGAAARADVRRLSRRT

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.99.- [C]

Molecular weight: Translated: 22846; Mature: 22715

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRLLVINGNPKPDSFCHALAREYARSAEEAGAEVTLLHVGELAFEPDLRHGYDLMPPL
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCC
EPDLLALQQSLSAAHHLVIVSPLWWGNMPARLKGLLDRTLLSGFAFQYVKGKALPLRLRL
CHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
LAGKTARLLLTMDSPVWYYRWWLGDPASRILDKQVLGLCGIRLTHRQYLGPMHTARDQDR
ECCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCHHHCCCHHH
ARWLTRTGAAARADVRRLSRRT
HHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PPRLLVINGNPKPDSFCHALAREYARSAEEAGAEVTLLHVGELAFEPDLRHGYDLMPPL
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCC
EPDLLALQQSLSAAHHLVIVSPLWWGNMPARLKGLLDRTLLSGFAFQYVKGKALPLRLRL
CHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
LAGKTARLLLTMDSPVWYYRWWLGDPASRILDKQVLGLCGIRLTHRQYLGPMHTARDQDR
ECCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCHHHCCCHHH
ARWLTRTGAAARADVRRLSRRT
HHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA