| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is yjeS [H]
Identifier: 145300259
GI number: 145300259
Start: 3650841
End: 3651995
Strand: Direct
Name: yjeS [H]
Synonym: ASA_3375
Alternate gene names: 145300259
Gene position: 3650841-3651995 (Clockwise)
Preceding gene: 145300249
Following gene: 145300260
Centisome position: 77.64
GC content: 62.77
Gene sequence:
>1155_bases ATGACTACGCCTGATTTTCAGCAGTTGGCTCACGATATCAAGCTATGGGCAGGCGAGCTAGGATTTGACCAGGTCGGTAT CACGGACACGGATCTTACCCTCGAGGAGCCCAGGCTGCAGGCCTGGCTGGATGCAGGCCATCACGGCAGCATGGACTACA TGGCCCGACACGGCATGATGCGGGCCCGCCCCCATGAGCTGCTGCCGGGCACACTGCGGGTAGTGTCGGTGCGCATGAAC TACCTCCCCTTCGAGGCGGGTTTTGCCGCCACCCTGCGCGATCCGACCCTCGGGTACATCAGCCGCTACGCTCTCGGCCG CGACTACCACAAGGTGCTGCGCAACCGCCTCAAGCAACTGGGGGAGCGGATCGAACAGCGTTGTCAGGCGCTGTTTCAAA CCACCCAGGACACAATGGGAGAGTGGCGCCCCTTCGTCGACTCGGCCCCCATACTGGAGCGGCCGCTGGCCGCCAAGGCG GGACTGGGCTGGGTCGGCAAGCATTCGCTACTGCTCAACGAATCGGCCGGTTCTTTCTTTTTTCTGGGGGAGCTGCTGCT CGCCCTGCCCCTGCCCATCGATGCCCCGGTGGAAAAAGAGCTGTGCGGCAAGTGCGTGGCCTGCATCAATATTTGCCCGA CCGGTGCCATAGTCGCGCCCTATGTGGTGGATGGGCGCCGCTGCATCTCCTACCTCACCATAGAGAACGACGGTCCCATC CCGGAAGAGTTCAGGCCGCTCATGGGCAATCGCATCTATGGTTGTGACGACTGCCAGCTCATCTGCCCCTGGAATCGCTA TGCAGATGCAAGCCCGGAACCCGACTTCAAAGCGCGCCCCAACCTGCACCGCCCGCCCCTGCTGGAGCTGTGGCGCTGGG CCGAGAGCGAATTTCTCAAGCACACTGAGGGGAGCCCGATCCGGCGCATCGGCTATCAACGCTGGCGCCGCAACCTGGCG GTGGCGCTTGGCAACGGCCCGGCTACACCAGAGGTGATCGCCGCCCTGCAACTGGCGCTCACCAGCGCCGAGCCCATGGT GGCCGAACACATAGCGTGGGCACTGACGACCCTGGCCAAACGCCAGCAGGATGACAACAAAAAGACACGCTTGCTGATCC GTTGCATCGAAAAAGGTCTGCCGGATCACGCATAA
Upstream 100 bases:
>100_bases GCCCTGGCTGAGACGCTTCGGGCACGCGATGCGACATGACCACATCTGATTTTCACTACCGGTTGACCCAGGACATCAAG CCTGTGGGGCTCGATGCCGC
Downstream 100 bases:
>100_bases GCGATCTGCCCCTTGCCGGATGCACACCATTTTTTCATGCTCTGTCGGCGGTTAACCGTCGGCACCATAAGCACTATAAA AGGAACAATCTGATGCAGAT
Product: Fe-S protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTTPDFQQLAHDIKLWAGELGFDQVGITDTDLTLEEPRLQAWLDAGHHGSMDYMARHGMMRARPHELLPGTLRVVSVRMN YLPFEAGFAATLRDPTLGYISRYALGRDYHKVLRNRLKQLGERIEQRCQALFQTTQDTMGEWRPFVDSAPILERPLAAKA GLGWVGKHSLLLNESAGSFFFLGELLLALPLPIDAPVEKELCGKCVACINICPTGAIVAPYVVDGRRCISYLTIENDGPI PEEFRPLMGNRIYGCDDCQLICPWNRYADASPEPDFKARPNLHRPPLLELWRWAESEFLKHTEGSPIRRIGYQRWRRNLA VALGNGPATPEVIAALQLALTSAEPMVAEHIAWALTTLAKRQQDDNKKTRLLIRCIEKGLPDHA
Sequences:
>Translated_384_residues MTTPDFQQLAHDIKLWAGELGFDQVGITDTDLTLEEPRLQAWLDAGHHGSMDYMARHGMMRARPHELLPGTLRVVSVRMN YLPFEAGFAATLRDPTLGYISRYALGRDYHKVLRNRLKQLGERIEQRCQALFQTTQDTMGEWRPFVDSAPILERPLAAKA GLGWVGKHSLLLNESAGSFFFLGELLLALPLPIDAPVEKELCGKCVACINICPTGAIVAPYVVDGRRCISYLTIENDGPI PEEFRPLMGNRIYGCDDCQLICPWNRYADASPEPDFKARPNLHRPPLLELWRWAESEFLKHTEGSPIRRIGYQRWRRNLA VALGNGPATPEVIAALQLALTSAEPMVAEHIAWALTTLAKRQQDDNKKTRLLIRCIEKGLPDHA >Mature_383_residues TTPDFQQLAHDIKLWAGELGFDQVGITDTDLTLEEPRLQAWLDAGHHGSMDYMARHGMMRARPHELLPGTLRVVSVRMNY LPFEAGFAATLRDPTLGYISRYALGRDYHKVLRNRLKQLGERIEQRCQALFQTTQDTMGEWRPFVDSAPILERPLAAKAG LGWVGKHSLLLNESAGSFFFLGELLLALPLPIDAPVEKELCGKCVACINICPTGAIVAPYVVDGRRCISYLTIENDGPIP EEFRPLMGNRIYGCDDCQLICPWNRYADASPEPDFKARPNLHRPPLLELWRWAESEFLKHTEGSPIRRIGYQRWRRNLAV ALGNGPATPEVIAALQLALTSAEPMVAEHIAWALTTLAKRQQDDNKKTRLLIRCIEKGLPDHA
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=390, Percent_Identity=65.1282051282051, Blast_Score=508, Evalue=1e-145,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 43222; Mature: 43091
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPDFQQLAHDIKLWAGELGFDQVGITDTDLTLEEPRLQAWLDAGHHGSMDYMARHGMM CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCH RARPHELLPGTLRVVSVRMNYLPFEAGFAATLRDPTLGYISRYALGRDYHKVLRNRLKQL HCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHH GERIEQRCQALFQTTQDTMGEWRPFVDSAPILERPLAAKAGLGWVGKHSLLLNESAGSFF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHCCCCCCCCCEEEEECCCCCHH FLGELLLALPLPIDAPVEKELCGKCVACINICPTGAIVAPYVVDGRRCISYLTIENDGPI HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEEECCCCCC PEEFRPLMGNRIYGCDDCQLICPWNRYADASPEPDFKARPNLHRPPLLELWRWAESEFLK CHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH HTEGSPIRRIGYQRWRRNLAVALGNGPATPEVIAALQLALTSAEPMVAEHIAWALTTLAK CCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RQQDDNKKTRLLIRCIEKGLPDHA HHCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTPDFQQLAHDIKLWAGELGFDQVGITDTDLTLEEPRLQAWLDAGHHGSMDYMARHGMM CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCH RARPHELLPGTLRVVSVRMNYLPFEAGFAATLRDPTLGYISRYALGRDYHKVLRNRLKQL HCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHH GERIEQRCQALFQTTQDTMGEWRPFVDSAPILERPLAAKAGLGWVGKHSLLLNESAGSFF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHCCCCCCCCCEEEEECCCCCHH FLGELLLALPLPIDAPVEKELCGKCVACINICPTGAIVAPYVVDGRRCISYLTIENDGPI HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEEECCCCCC PEEFRPLMGNRIYGCDDCQLICPWNRYADASPEPDFKARPNLHRPPLLELWRWAESEFLK CHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH HTEGSPIRRIGYQRWRRNLAVALGNGPATPEVIAALQLALTSAEPMVAEHIAWALTTLAK CCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RQQDDNKKTRLLIRCIEKGLPDHA HHCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]