| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is imp [H]
Identifier: 145300232
GI number: 145300232
Start: 3619857
End: 3622289
Strand: Direct
Name: imp [H]
Synonym: ASA_3347
Alternate gene names: 145300232
Gene position: 3619857-3622289 (Clockwise)
Preceding gene: 145300228
Following gene: 145300233
Centisome position: 76.98
GC content: 56.76
Gene sequence:
>2433_bases ATGACAAAATGGACACTGGGGTACTCATATCCCATCGCCCTGACCATCAGCCTTATCCCAGCCCTGACCCCGGCCATAGT GCAGGCGGCTCCGCTGACGCCGCCGCCCGCCACCGGGATCCTGGACGGGCTCTGCTATGACTATGTACCCAAGGTAGAGA AACTGGCCCCCGGAAAGGATGCCAACGCCCAACCTGTCGAAGTGGATGCCGATCGGCTAGAGGCCAAGCAGGGCGGTACC GCCGTCTATCAGGGCGATGTCAAAGTTCGCCAGGGTGTGCGCAAATTTGACTCGGATTATGCCGAGCTCGATCAGAAGAG CCGGGATGTCATCGCCATCGGCAACATCTATTACAACGATGGCCAGATCACTGTCACCAGTGACAAGACCCTGAAATCCA ACCTGGATACCAAGAATTCCGAGCTGGAAGAGGGCAAATACCAGGTTCATGGCTCACCGGTACGCGGCTCTGCCGACCGG GTCACCATGACCAACAACAACCAGAACATCACTCTGGAAGGGGCTCAGTACACAACCTGCCCACCTGGCCAGGAAGTATG GACCCTGAAAGCGGGCAGCATCGACATCGATCAGACAGAGGTGTTCGGGGAAGCCTGGAACGCCAGCCTCTGGCTCTATG ACTATCCAGTATTCTATTTCCCGTATATCAACTTCCCCATCAAGGATGAGCGCAAAACCGGCCTGCTCTACCCGGGTTAT ACCCAGAGCTCCAAGAACGGCATGGACATCACCCAGCCGTTCTACTGGAACATAGCGCCCAACTACGATGCCACCATCAC TTCCCGTTTCATGGACAGACGGGGCCTGATGGAGCAGGTCGAGTTCCGCTATATGCCGGACCCGGCCCATGTCGGCAGCC TCTATTTCGAAAATCTGGCAGACGACAAACAGTATGATGAAACCCCCAGCCTGAACGAAAAGCTGTCTGACGGGCATCGC TATTTGCTCAATGCGCGCCACACCTCACTGTTTGCCGACAATGCCATGCGGGTGTCGGTCGACTACACCAAGGTCCGGGA TCGGGATTACAACTACTTCAACGACTTCTCCCCCAAGGTGGGCACCCAGGTCGAGAACCAGTTGCAGCAATCCCTGATGG CCGGCTACTTCCAGCAAAACTGGAACCTCAACACAGAGGTGCGGACCTACCAGATACTGCTGGCAAGTGCCCAGCAGCCT CACGAACTGATGCCACGGATCAACCACAACTACTACCATCAGGGCAACTGGTACGATCTGGCCTGGAATACCGAAGTCAC CCGGTTCGGTTACAACAACACCCAGGCCTCAGCGCAAAACCTGGGAGATGCCTATACCGGCACCCGGGTCTACACGGCGC CGACCCTGACCATGCCGCTCATCGACGAGGCGGGCTACTACCTCGACAGCCAGTACAAGCTGATGTACACCCGTTACGAT CAGGAAGTGCCGGACAACATGAGCTCCACCTTCACCAAGCGGTTCACTCCTGAAGGTGCGAGCGGTGTTACTTTGGATGA GGGCATCATCACCCGGACACTGCCTTCCTTCCGCCTCAAGGGCGGCATGACCTTCGAACGCAACCAGGACTGGTTTGGTG GCGACGCCAATCAAACCCTGGAGCCCGAGTTCCAGTACCTCTATGTGCCCTACAAGGATCAGGACAACATAGGTGTCTAC GACTCCACCACCATGCGTCAGGACTACTACAGCCTGTTCAGCGACCGCCGTTATGCCGGTCTGGACCGCATCAGCGACTC CAACAGGGTCTCACTCGGTGTTACCACCCGGGTTTATGATCAGGCTGGTGATGAACGAATTCGACTGGCCGTTGCCCAAG CTTTCGACTTTGTTGCCCCCAGGGTCAAGCTCTACCCCAGCGAGTCACTGGCGACCAACACCCGCTCCCCGCTCTCGTTT GAGGGGGATGCCAAGATCAACGAGCAGTGGTTTGCCCATGCCGGGGCGCAATATGATATGGATCAGAGCGAGATCAGCTC TGCCAACAGCGCCCTCGAGTATCGCCGCGAGAAGCTGATCAGCCAGTTGAACTACCGCTTCGTGCGCAATGCCAACTACG ACCTGTCGAACACCAACCAGGTCGCCGACCTAAATCAGGTCGGCATGCTGTTGACCACACCGCTCAATGATCAGTGGCAC CTCTACGGTGGCTACTATCACGACCTTGATCAGGGAGTGAAGGTGGATCGCAAGGTGGGTCTGAAATATGACTCCTGCTG CTGGAGCATCAACTTCAACCTGGAGTGGGTCAATACACCGGATAACGTGACCATGCGTCCGACCTCGGAGCGCAGCCTGG GCATTCAGTTTGAAATGAAAGGATTGGGTAGCGTGGGTACCGGCTCCAAGGGCACCTCCCTGGATACCGAAGCACTGCCT TACATTCGTCCGTTTAACCTGCGAGACCAATAA
Upstream 100 bases:
>100_bases AACATAAAGCAATGACATGCAATGTCAACTCGATGAATCCTGTCGTAAAATGCATGTCTTGAATCAGCCGTATCTACCAC GGATTGCGCGAGTCTTTCAC
Downstream 100 bases:
>100_bases CCGGTCTGGCAAACGCCTTGAGAGATGGATATGAAGAAGACGTTGATTTCCCTGCTGACTGCAGGCCTGTTCGGAGCCAT GAGTCAGGGGGCCTTCGCCG
Product: organic solvent tolerance protein
Products: NA
Alternate protein names: Organic solvent tolerance protein [H]
Number of amino acids: Translated: 810; Mature: 809
Protein sequence:
>810_residues MTKWTLGYSYPIALTISLIPALTPAIVQAAPLTPPPATGILDGLCYDYVPKVEKLAPGKDANAQPVEVDADRLEAKQGGT AVYQGDVKVRQGVRKFDSDYAELDQKSRDVIAIGNIYYNDGQITVTSDKTLKSNLDTKNSELEEGKYQVHGSPVRGSADR VTMTNNNQNITLEGAQYTTCPPGQEVWTLKAGSIDIDQTEVFGEAWNASLWLYDYPVFYFPYINFPIKDERKTGLLYPGY TQSSKNGMDITQPFYWNIAPNYDATITSRFMDRRGLMEQVEFRYMPDPAHVGSLYFENLADDKQYDETPSLNEKLSDGHR YLLNARHTSLFADNAMRVSVDYTKVRDRDYNYFNDFSPKVGTQVENQLQQSLMAGYFQQNWNLNTEVRTYQILLASAQQP HELMPRINHNYYHQGNWYDLAWNTEVTRFGYNNTQASAQNLGDAYTGTRVYTAPTLTMPLIDEAGYYLDSQYKLMYTRYD QEVPDNMSSTFTKRFTPEGASGVTLDEGIITRTLPSFRLKGGMTFERNQDWFGGDANQTLEPEFQYLYVPYKDQDNIGVY DSTTMRQDYYSLFSDRRYAGLDRISDSNRVSLGVTTRVYDQAGDERIRLAVAQAFDFVAPRVKLYPSESLATNTRSPLSF EGDAKINEQWFAHAGAQYDMDQSEISSANSALEYRREKLISQLNYRFVRNANYDLSNTNQVADLNQVGMLLTTPLNDQWH LYGGYYHDLDQGVKVDRKVGLKYDSCCWSINFNLEWVNTPDNVTMRPTSERSLGIQFEMKGLGSVGTGSKGTSLDTEALP YIRPFNLRDQ
Sequences:
>Translated_810_residues MTKWTLGYSYPIALTISLIPALTPAIVQAAPLTPPPATGILDGLCYDYVPKVEKLAPGKDANAQPVEVDADRLEAKQGGT AVYQGDVKVRQGVRKFDSDYAELDQKSRDVIAIGNIYYNDGQITVTSDKTLKSNLDTKNSELEEGKYQVHGSPVRGSADR VTMTNNNQNITLEGAQYTTCPPGQEVWTLKAGSIDIDQTEVFGEAWNASLWLYDYPVFYFPYINFPIKDERKTGLLYPGY TQSSKNGMDITQPFYWNIAPNYDATITSRFMDRRGLMEQVEFRYMPDPAHVGSLYFENLADDKQYDETPSLNEKLSDGHR YLLNARHTSLFADNAMRVSVDYTKVRDRDYNYFNDFSPKVGTQVENQLQQSLMAGYFQQNWNLNTEVRTYQILLASAQQP HELMPRINHNYYHQGNWYDLAWNTEVTRFGYNNTQASAQNLGDAYTGTRVYTAPTLTMPLIDEAGYYLDSQYKLMYTRYD QEVPDNMSSTFTKRFTPEGASGVTLDEGIITRTLPSFRLKGGMTFERNQDWFGGDANQTLEPEFQYLYVPYKDQDNIGVY DSTTMRQDYYSLFSDRRYAGLDRISDSNRVSLGVTTRVYDQAGDERIRLAVAQAFDFVAPRVKLYPSESLATNTRSPLSF EGDAKINEQWFAHAGAQYDMDQSEISSANSALEYRREKLISQLNYRFVRNANYDLSNTNQVADLNQVGMLLTTPLNDQWH LYGGYYHDLDQGVKVDRKVGLKYDSCCWSINFNLEWVNTPDNVTMRPTSERSLGIQFEMKGLGSVGTGSKGTSLDTEALP YIRPFNLRDQ >Mature_809_residues TKWTLGYSYPIALTISLIPALTPAIVQAAPLTPPPATGILDGLCYDYVPKVEKLAPGKDANAQPVEVDADRLEAKQGGTA VYQGDVKVRQGVRKFDSDYAELDQKSRDVIAIGNIYYNDGQITVTSDKTLKSNLDTKNSELEEGKYQVHGSPVRGSADRV TMTNNNQNITLEGAQYTTCPPGQEVWTLKAGSIDIDQTEVFGEAWNASLWLYDYPVFYFPYINFPIKDERKTGLLYPGYT QSSKNGMDITQPFYWNIAPNYDATITSRFMDRRGLMEQVEFRYMPDPAHVGSLYFENLADDKQYDETPSLNEKLSDGHRY LLNARHTSLFADNAMRVSVDYTKVRDRDYNYFNDFSPKVGTQVENQLQQSLMAGYFQQNWNLNTEVRTYQILLASAQQPH ELMPRINHNYYHQGNWYDLAWNTEVTRFGYNNTQASAQNLGDAYTGTRVYTAPTLTMPLIDEAGYYLDSQYKLMYTRYDQ EVPDNMSSTFTKRFTPEGASGVTLDEGIITRTLPSFRLKGGMTFERNQDWFGGDANQTLEPEFQYLYVPYKDQDNIGVYD STTMRQDYYSLFSDRRYAGLDRISDSNRVSLGVTTRVYDQAGDERIRLAVAQAFDFVAPRVKLYPSESLATNTRSPLSFE GDAKINEQWFAHAGAQYDMDQSEISSANSALEYRREKLISQLNYRFVRNANYDLSNTNQVADLNQVGMLLTTPLNDQWHL YGGYYHDLDQGVKVDRKVGLKYDSCCWSINFNLEWVNTPDNVTMRPTSERSLGIQFEMKGLGSVGTGSKGTSLDTEALPY IRPFNLRDQ
Specific function: Involved in the assembly of LPS in the outer leaflet of the outer membrane. Determines N-hexane tolerance and is involved in outer membrane permeability. Essential for envelope biogenesis [H]
COG id: COG1452
COG function: function code M; Organic solvent tolerance protein OstA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptD family [H]
Homologues:
Organism=Escherichia coli, GI1786239, Length=806, Percent_Identity=32.7543424317618, Blast_Score=405, Evalue=1e-114,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020889 - InterPro: IPR005653 - InterPro: IPR007543 [H]
Pfam domain/function: PF03968 OstA; PF04453 OstA_C [H]
EC number: NA
Molecular weight: Translated: 92196; Mature: 92065
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKWTLGYSYPIALTISLIPALTPAIVQAAPLTPPPATGILDGLCYDYVPKVEKLAPGKD CCEEEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCC ANAQPVEVDADRLEAKQGGTAVYQGDVKVRQGVRKFDSDYAELDQKSRDVIAIGNIYYND CCCCCEECCHHHHHHCCCCCEEEECCHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEEEC GQITVTSDKTLKSNLDTKNSELEEGKYQVHGSPVRGSADRVTMTNNNQNITLEGAQYTTC CEEEEECCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEECCEECCC PPGQEVWTLKAGSIDIDQTEVFGEAWNASLWLYDYPVFYFPYINFPIKDERKTGLLYPGY CCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCEEEEEEECCCCCCCCCCCCEECCC TQSSKNGMDITQPFYWNIAPNYDATITSRFMDRRGLMEQVEFRYMPDPAHVGSLYFENLA CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHC DDKQYDETPSLNEKLSDGHRYLLNARHTSLFADNAMRVSVDYTKVRDRDYNYFNDFSPKV CCCCCCCCCCHHHHHCCCCEEEEECCHHEEEECCEEEEEEEHHEECCCCCCCCCCCCCCC GTQVENQLQQSLMAGYFQQNWNLNTEVRTYQILLASAQQPHELMPRINHNYYHQGNWYDL CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHCCCCCEEECCCEEEE AWNTEVTRFGYNNTQASAQNLGDAYTGTRVYTAPTLTMPLIDEAGYYLDSQYKLMYTRYD EECCEEEEECCCCCHHHHHHCCCCCCCCEEEECCCEEEEEHHCCCCEECCCEEEEEEECC QEVPDNMSSTFTKRFTPEGASGVTLDEGIITRTLPSFRLKGGMTFERNQDWFGGDANQTL CCCCCCHHHHHHHHCCCCCCCCCEECCCHHHHCCCCCEECCCCEEECCCCCCCCCCCCCC EPEFQYLYVPYKDQDNIGVYDSTTMRQDYYSLFSDRRYAGLDRISDSNRVSLGVTTRVYD CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEEEEEEHH QAGDERIRLAVAQAFDFVAPRVKLYPSESLATNTRSPLSFEGDAKINEQWFAHAGAQYDM CCCCCEEEHHHHHHHHHHCCCEEECCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC DQSEISSANSALEYRREKLISQLNYRFVRNANYDLSNTNQVADLNQVGMLLTTPLNDQWH CHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHCCEEEECCCCCCEE LYGGYYHDLDQGVKVDRKVGLKYDSCCWSINFNLEWVNTPDNVTMRPTSERSLGIQFEMK EECCCHHHHHCCCEEHHHHCCEECCEEEEEEEEEEEECCCCCEEECCCCCCCEEEEEEEC GLGSVGTGSKGTSLDTEALPYIRPFNLRDQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKWTLGYSYPIALTISLIPALTPAIVQAAPLTPPPATGILDGLCYDYVPKVEKLAPGKD CEEEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCC ANAQPVEVDADRLEAKQGGTAVYQGDVKVRQGVRKFDSDYAELDQKSRDVIAIGNIYYND CCCCCEECCHHHHHHCCCCCEEEECCHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEEEC GQITVTSDKTLKSNLDTKNSELEEGKYQVHGSPVRGSADRVTMTNNNQNITLEGAQYTTC CEEEEECCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEECCEECCC PPGQEVWTLKAGSIDIDQTEVFGEAWNASLWLYDYPVFYFPYINFPIKDERKTGLLYPGY CCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCEEEEEEECCCCCCCCCCCCEECCC TQSSKNGMDITQPFYWNIAPNYDATITSRFMDRRGLMEQVEFRYMPDPAHVGSLYFENLA CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHC DDKQYDETPSLNEKLSDGHRYLLNARHTSLFADNAMRVSVDYTKVRDRDYNYFNDFSPKV CCCCCCCCCCHHHHHCCCCEEEEECCHHEEEECCEEEEEEEHHEECCCCCCCCCCCCCCC GTQVENQLQQSLMAGYFQQNWNLNTEVRTYQILLASAQQPHELMPRINHNYYHQGNWYDL CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHCCCCCEEECCCEEEE AWNTEVTRFGYNNTQASAQNLGDAYTGTRVYTAPTLTMPLIDEAGYYLDSQYKLMYTRYD EECCEEEEECCCCCHHHHHHCCCCCCCCEEEECCCEEEEEHHCCCCEECCCEEEEEEECC QEVPDNMSSTFTKRFTPEGASGVTLDEGIITRTLPSFRLKGGMTFERNQDWFGGDANQTL CCCCCCHHHHHHHHCCCCCCCCCEECCCHHHHCCCCCEECCCCEEECCCCCCCCCCCCCC EPEFQYLYVPYKDQDNIGVYDSTTMRQDYYSLFSDRRYAGLDRISDSNRVSLGVTTRVYD CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEEEEEEHH QAGDERIRLAVAQAFDFVAPRVKLYPSESLATNTRSPLSFEGDAKINEQWFAHAGAQYDM CCCCCEEEHHHHHHHHHHCCCEEECCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC DQSEISSANSALEYRREKLISQLNYRFVRNANYDLSNTNQVADLNQVGMLLTTPLNDQWH CHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHCCEEEECCCCCCEE LYGGYYHDLDQGVKVDRKVGLKYDSCCWSINFNLEWVNTPDNVTMRPTSERSLGIQFEMK EECCCHHHHHCCCEEHHHHCCEECCEEEEEEEEEEEECCCCCEEECCCCCCCEEEEEEEC GLGSVGTGSKGTSLDTEALPYIRPFNLRDQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA