| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is ushA [C]
Identifier: 145300180
GI number: 145300180
Start: 3560002
End: 3561840
Strand: Direct
Name: ushA [C]
Synonym: ASA_3291
Alternate gene names: 145300180
Gene position: 3560002-3561840 (Clockwise)
Preceding gene: 145300179
Following gene: 145300181
Centisome position: 75.71
GC content: 57.15
Gene sequence:
>1839_bases ATGAAGAAGACGTTACTGGCCGTCACCGTCTCTATTACTCTGCTCGGGCTGACCGCCTGCAATTCAGAAAACAGCAGCAA GGAGCATATTCCGCTGGATCTGACCATTGCCCATATCAATGATACCCACGCCCACCTCGACCCGACCGAAAATGCGCTGG CCATCCAGCCCACCGGCCAGGAACTGTTCAAGTTCTACGCCAAACTGGGCGGCTATCCCCGTCTGAAGTTCAAGCTGGAC GAGCTGCGCAGCCAGGCCGCCAACGAAGGCCGCAACTTCATGGTGCTCAACGGTGGTGATGCCTTCCAGGGCACCCTCTA CTTCACCCAGTTCAAGGGGGAAGAGGAGTCTCGCCTGCTCTCCGACATGGGTATCGATGCCATGGTGCTGGGCAACCACG AATTTGATTTGGGCAATCAGGCCATTAAAGATTTCGTCTCACGGGTGAATTTCCCTGTATTGGCTTCCAACATGGTGAAA TCCAGTAGCGCCACCCTGAAAGACAGTGAAAATATTCATGAATATGTCATTAAAGAAATAAATGGCGAGAGCGTGGGTAT TTTCGGGCTGGTGCTGGAAAATATGCATGATATCTCTTCACCGGATACCGATACCCAATTCCTGCCGATGATTGAAACCG CCCAGAAAATGGTCGACACCCTCAAGTCAAAAGGCGCCAACAAGATCATCATGGTCACTCATATCGGTCTGCAAAATGAC CAGGCCGTCGCCAAGGCGGTCAACGGTATCGACCTGATTGTAGGCGGTCACTCCCAGACCTTCCTCGGCGACATCAACGA GATCAACACCATAGGCTACACGGCCCACAACCAGAATCCGGACGACGACAACACCTATGCCCAGCTGGTCGGCAATCCGG ACGGTGGCAAGACCTGTATCGTGCAGGCCGGTGAATGGGCCAAAGGCTATGGCCTGGTCAACGTCTCCCTGAGCAAGGAA GGCCAGATCACCAAGTGTGAGGGGCGCAATACCCTGATGACGGGCGACGATTTCACCAAGGACGTGGCCAAGAAGAAAGA GCCCCTGAGTGGCAGCGAGCAGACCAATGTGGTCGACTTCATCACCAAGTCACCCGTCATCGAAATCGTGCCGGAGAACA CCGCCATGCGCGATGTGATCGACACAGAGTACAAACCGGCCGTGGCCGAGCTCGAGGCCAAGATCATCGCCGACGTGCCG ACCAAGTTGCCCCATGTGCGCGTGCCGGCCACCCCGGATGGCGCGGGTCTGATCGATCCCCTGGTGGCCGAATCCCTCTA CTGGAAGCTCAACAAACTCAATACCAAGGTGGACTTCACCATCCAGAACGCCGGTGGTGTGCGCGCCGATGTGAACGCGG GCCCGCTCTCCGTCGGTTACGTGATGGGCACCTTGCTGCCGTTTGGCAACAAGATCGCCGCCTTCAACCTCAAGGGCAAG GACGTGCGCGCCACTCTGGAGTACGCCGTTGACTATTCCATCGGCCACGAGACCGGGATCAGCGCCTCCAGCGGTGCTTT CCCTTACGTCGGCCACCTGAGCTACACCTATGATGGCAAACTGGCCAAGGGTTCCCGCATCACCAAGCTGGAGCTGCTGG ACGCCAACGGCCAGTGGCAGCCGCTGGACGACGACAAGGTGTACCGTGTCGGTGCCAACACCTATATCGCCTCCGGCAAG GATGGCTACAACGGCCTGCTCAAGCGCGAAGAGCTGCCCAACAAGGGTGACTACGTCGACTCTGGCGTCGGTGAGAACGA GATGTTCATGGAGTATGCCGAGTCCCAGGGCACCCTCAATCCACTGCCCTATGCGACCGTGACCTACTTCAAGCCCTGA
Upstream 100 bases:
>100_bases GCTCTCTTTATTTCCAATTACTGCTTTTTGCCTAGAATCGCCACACTCCTGTCATACAGGAACGATATACAGGACAATAA CAACAAGAGGATTATTACCA
Downstream 100 bases:
>100_bases TCAGGCTCACACGCTATTGCAACGGCGCCTGAGGGCGCCGTTTTTATGGCATACTCCCCGCCCATCGATGCCGAGGAGAA TGTTTGATGGCCAAATACGA
Product: 5'-nucleotidase/2',3'-cyclic phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 612; Mature: 612
Protein sequence:
>612_residues MKKTLLAVTVSITLLGLTACNSENSSKEHIPLDLTIAHINDTHAHLDPTENALAIQPTGQELFKFYAKLGGYPRLKFKLD ELRSQAANEGRNFMVLNGGDAFQGTLYFTQFKGEEESRLLSDMGIDAMVLGNHEFDLGNQAIKDFVSRVNFPVLASNMVK SSSATLKDSENIHEYVIKEINGESVGIFGLVLENMHDISSPDTDTQFLPMIETAQKMVDTLKSKGANKIIMVTHIGLQND QAVAKAVNGIDLIVGGHSQTFLGDINEINTIGYTAHNQNPDDDNTYAQLVGNPDGGKTCIVQAGEWAKGYGLVNVSLSKE GQITKCEGRNTLMTGDDFTKDVAKKKEPLSGSEQTNVVDFITKSPVIEIVPENTAMRDVIDTEYKPAVAELEAKIIADVP TKLPHVRVPATPDGAGLIDPLVAESLYWKLNKLNTKVDFTIQNAGGVRADVNAGPLSVGYVMGTLLPFGNKIAAFNLKGK DVRATLEYAVDYSIGHETGISASSGAFPYVGHLSYTYDGKLAKGSRITKLELLDANGQWQPLDDDKVYRVGANTYIASGK DGYNGLLKREELPNKGDYVDSGVGENEMFMEYAESQGTLNPLPYATVTYFKP
Sequences:
>Translated_612_residues MKKTLLAVTVSITLLGLTACNSENSSKEHIPLDLTIAHINDTHAHLDPTENALAIQPTGQELFKFYAKLGGYPRLKFKLD ELRSQAANEGRNFMVLNGGDAFQGTLYFTQFKGEEESRLLSDMGIDAMVLGNHEFDLGNQAIKDFVSRVNFPVLASNMVK SSSATLKDSENIHEYVIKEINGESVGIFGLVLENMHDISSPDTDTQFLPMIETAQKMVDTLKSKGANKIIMVTHIGLQND QAVAKAVNGIDLIVGGHSQTFLGDINEINTIGYTAHNQNPDDDNTYAQLVGNPDGGKTCIVQAGEWAKGYGLVNVSLSKE GQITKCEGRNTLMTGDDFTKDVAKKKEPLSGSEQTNVVDFITKSPVIEIVPENTAMRDVIDTEYKPAVAELEAKIIADVP TKLPHVRVPATPDGAGLIDPLVAESLYWKLNKLNTKVDFTIQNAGGVRADVNAGPLSVGYVMGTLLPFGNKIAAFNLKGK DVRATLEYAVDYSIGHETGISASSGAFPYVGHLSYTYDGKLAKGSRITKLELLDANGQWQPLDDDKVYRVGANTYIASGK DGYNGLLKREELPNKGDYVDSGVGENEMFMEYAESQGTLNPLPYATVTYFKP >Mature_612_residues MKKTLLAVTVSITLLGLTACNSENSSKEHIPLDLTIAHINDTHAHLDPTENALAIQPTGQELFKFYAKLGGYPRLKFKLD ELRSQAANEGRNFMVLNGGDAFQGTLYFTQFKGEEESRLLSDMGIDAMVLGNHEFDLGNQAIKDFVSRVNFPVLASNMVK SSSATLKDSENIHEYVIKEINGESVGIFGLVLENMHDISSPDTDTQFLPMIETAQKMVDTLKSKGANKIIMVTHIGLQND QAVAKAVNGIDLIVGGHSQTFLGDINEINTIGYTAHNQNPDDDNTYAQLVGNPDGGKTCIVQAGEWAKGYGLVNVSLSKE GQITKCEGRNTLMTGDDFTKDVAKKKEPLSGSEQTNVVDFITKSPVIEIVPENTAMRDVIDTEYKPAVAELEAKIIADVP TKLPHVRVPATPDGAGLIDPLVAESLYWKLNKLNTKVDFTIQNAGGVRADVNAGPLSVGYVMGTLLPFGNKIAAFNLKGK DVRATLEYAVDYSIGHETGISASSGAFPYVGHLSYTYDGKLAKGSRITKLELLDANGQWQPLDDDKVYRVGANTYIASGK DGYNGLLKREELPNKGDYVDSGVGENEMFMEYAESQGTLNPLPYATVTYFKP
Specific function: Degradation Of External Udp-Glucose To Uridine Monophosphate And Glucose-1-Phosphate, Which Can Then Be Used By The Cell. [C]
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family [H]
Homologues:
Organism=Homo sapiens, GI4505467, Length=551, Percent_Identity=27.5862068965517, Blast_Score=157, Evalue=4e-38, Organism=Escherichia coli, GI1786687, Length=616, Percent_Identity=24.3506493506494, Blast_Score=110, Evalue=2e-25, Organism=Drosophila melanogaster, GI24641187, Length=563, Percent_Identity=27.708703374778, Blast_Score=175, Evalue=8e-44, Organism=Drosophila melanogaster, GI19922446, Length=576, Percent_Identity=24.3055555555556, Blast_Score=158, Evalue=8e-39, Organism=Drosophila melanogaster, GI24654424, Length=576, Percent_Identity=24.3055555555556, Blast_Score=158, Evalue=8e-39, Organism=Drosophila melanogaster, GI221329836, Length=586, Percent_Identity=25.5972696245734, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI19922444, Length=561, Percent_Identity=24.9554367201426, Blast_Score=151, Evalue=2e-36, Organism=Drosophila melanogaster, GI28573524, Length=554, Percent_Identity=24.187725631769, Blast_Score=146, Evalue=5e-35, Organism=Drosophila melanogaster, GI19921980, Length=182, Percent_Identity=31.3186813186813, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI161076508, Length=182, Percent_Identity=31.3186813186813, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24652512, Length=182, Percent_Identity=31.3186813186813, Blast_Score=90, Evalue=5e-18,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR004843 - InterPro: IPR006420 [H]
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 66506; Mature: 66506
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLLAVTVSITLLGLTACNSENSSKEHIPLDLTIAHINDTHAHLDPTENALAIQPTGQ CCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCHH ELFKFYAKLGGYPRLKFKLDELRSQAANEGRNFMVLNGGDAFQGTLYFTQFKGEEESRLL HHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHH SDMGIDAMVLGNHEFDLGNQAIKDFVSRVNFPVLASNMVKSSSATLKDSENIHEYVIKEI HHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHC NGESVGIFGLVLENMHDISSPDTDTQFLPMIETAQKMVDTLKSKGANKIIMVTHIGLQND CCCCEEEHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC QAVAKAVNGIDLIVGGHSQTFLGDINEINTIGYTAHNQNPDDDNTYAQLVGNPDGGKTCI HHHHHHCCCEEEEECCCCCCEECCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEE VQAGEWAKGYGLVNVSLSKEGQITKCEGRNTLMTGDDFTKDVAKKKEPLSGSEQTNVVDF EECCCCCCCEEEEEEEECCCCCEEEECCCCEEECCCHHHHHHHHHCCCCCCCCCCCEEEE ITKSPVIEIVPENTAMRDVIDTEYKPAVAELEAKIIADVPTKLPHVRVPATPDGAGLIDP ECCCCEEEEECCCCHHHHHHCCCCCCHHHHHHHHHEECCCCCCCEEECCCCCCCCCCHHH LVAESLYWKLNKLNTKVDFTIQNAGGVRADVNAGPLSVGYVMGTLLPFGNKIAAFNLKGK HHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCEEHHHHHHHHHCCCCEEEEEECCCC DVRATLEYAVDYSIGHETGISASSGAFPYVGHLSYTYDGKLAKGSRITKLELLDANGQWQ CEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCC PLDDDKVYRVGANTYIASGKDGYNGLLKREELPNKGDYVDSGVGENEMFMEYAESQGTLN CCCCCCEEEEECCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PLPYATVTYFKP CCCCEEEEEECC >Mature Secondary Structure MKKTLLAVTVSITLLGLTACNSENSSKEHIPLDLTIAHINDTHAHLDPTENALAIQPTGQ CCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCHH ELFKFYAKLGGYPRLKFKLDELRSQAANEGRNFMVLNGGDAFQGTLYFTQFKGEEESRLL HHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHH SDMGIDAMVLGNHEFDLGNQAIKDFVSRVNFPVLASNMVKSSSATLKDSENIHEYVIKEI HHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHC NGESVGIFGLVLENMHDISSPDTDTQFLPMIETAQKMVDTLKSKGANKIIMVTHIGLQND CCCCEEEHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC QAVAKAVNGIDLIVGGHSQTFLGDINEINTIGYTAHNQNPDDDNTYAQLVGNPDGGKTCI HHHHHHCCCEEEEECCCCCCEECCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEE VQAGEWAKGYGLVNVSLSKEGQITKCEGRNTLMTGDDFTKDVAKKKEPLSGSEQTNVVDF EECCCCCCCEEEEEEEECCCCCEEEECCCCEEECCCHHHHHHHHHCCCCCCCCCCCEEEE ITKSPVIEIVPENTAMRDVIDTEYKPAVAELEAKIIADVPTKLPHVRVPATPDGAGLIDP ECCCCEEEEECCCCHHHHHHCCCCCCHHHHHHHHHEECCCCCCCEEECCCCCCCCCCHHH LVAESLYWKLNKLNTKVDFTIQNAGGVRADVNAGPLSVGYVMGTLLPFGNKIAAFNLKGK HHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCEEHHHHHHHHHCCCCEEEEEECCCC DVRATLEYAVDYSIGHETGISASSGAFPYVGHLSYTYDGKLAKGSRITKLELLDANGQWQ CEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCC PLDDDKVYRVGANTYIASGKDGYNGLLKREELPNKGDYVDSGVGENEMFMEYAESQGTLN CCCCCCEEEEECCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PLPYATVTYFKP CCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]