| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
Click here to switch to the map view.
The map label for this gene is 145300179
Identifier: 145300179
GI number: 145300179
Start: 3557166
End: 3558008
Strand: Direct
Name: 145300179
Synonym: ASA_3289
Alternate gene names: NA
Gene position: 3557166-3558008 (Clockwise)
Preceding gene: 145300175
Following gene: 145300180
Centisome position: 75.65
GC content: 60.74
Gene sequence:
>843_bases ATGAAAAAGATGCTGACCCTGTTTGCCGTGATCCTGGCCATTGGCCTGGGGGCACCCATTGCCGAGGCCAAGAAATTTGG CGGCGGTAAATCCTTTGGCAAGAGCTACAAAACAGCTCCGGCCAAACCCGTCGACACCAAGAACCCGGCGGTCGGGGCTC AGGCCGCACCGAAGAAAGGTGGCATGATGGGCGGCCTGCTCGGCGGCCTGCTGGCCGGTGGTCTGTTCGCTTACCTGCTG GGTAGCGGCGCCTTCGAAGGTCTGCAAGGCATGGACATGCTGCTGATCGCGCTGCTGGCGCTGGGCGCCGTCTTCCTGTT CCGCGCCATGCGCAAGAGCAAGGCACCCTCGCCTCAACCACAGACGGCCTACGCCGGCTATCAGCCGCCATCGGCTACGC CGCAGCAGTTCGAACAGAGCAGCAGTGCGTCGCAAGCGACCGGCTTTGCCGACAGCGACGTGCCGTTCCGTTTGCCGCCA GGTTTTGACATGAACAGTTTCCTGTCCGGCGCCCGCGATCACTATCGCACCCTGCAAGAAGCCTGGAACACAAACGATCT CGAAAAAGTGCGTGAGTATGTGAGCCCTGAGTTGTTCGAACAGCTCAAAGCCGAACGCGCAGAGCTGACCGGCGAACAGC ATACCGAAGTCATGTATGTGGATACCCAGCTGGTACGTGCCGACTACGGCAGCGACTGGGCCCAGGTCAGCGTACGCTTC AGCGGCCGCTACATGGACCGTCAGGAGCAGGTCGAGGAAGACATCAAAGAGGTGTGGCACCTCGAGCGTAACCTGGCCAA GGACAATGCACCCTGGCACATTGTCGGTATCGAGCAGCTGTAA
Upstream 100 bases:
>100_bases GCTGCACTACAACGAGGGACAGGCAGCCTGTCATGCACCTGGCTGAGCTTGCTAAAGCAGACCATGTCCCCATCCACTGA TGAGAGTGAAAAGAGTCAAA
Downstream 100 bases:
>100_bases ACGCTCTTTATCCTGCGAAGACAACAGAGGCGGCCCAAGGCCGCCTCTGTTATTTTTGACTCCCTGCGTGCCCTCTCCAA CCCCCTCCCCTGCAAGTCCA
Product: import inner membrane translocase
Products: NA
Alternate protein names: Tim44-Like Domain-Contain Protein; Transmembrane Protein; Tim44-Like Domain Protein; Tim44 Domain Protein
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKKMLTLFAVILAIGLGAPIAEAKKFGGGKSFGKSYKTAPAKPVDTKNPAVGAQAAPKKGGMMGGLLGGLLAGGLFAYLL GSGAFEGLQGMDMLLIALLALGAVFLFRAMRKSKAPSPQPQTAYAGYQPPSATPQQFEQSSSASQATGFADSDVPFRLPP GFDMNSFLSGARDHYRTLQEAWNTNDLEKVREYVSPELFEQLKAERAELTGEQHTEVMYVDTQLVRADYGSDWAQVSVRF SGRYMDRQEQVEEDIKEVWHLERNLAKDNAPWHIVGIEQL
Sequences:
>Translated_280_residues MKKMLTLFAVILAIGLGAPIAEAKKFGGGKSFGKSYKTAPAKPVDTKNPAVGAQAAPKKGGMMGGLLGGLLAGGLFAYLL GSGAFEGLQGMDMLLIALLALGAVFLFRAMRKSKAPSPQPQTAYAGYQPPSATPQQFEQSSSASQATGFADSDVPFRLPP GFDMNSFLSGARDHYRTLQEAWNTNDLEKVREYVSPELFEQLKAERAELTGEQHTEVMYVDTQLVRADYGSDWAQVSVRF SGRYMDRQEQVEEDIKEVWHLERNLAKDNAPWHIVGIEQL >Mature_280_residues MKKMLTLFAVILAIGLGAPIAEAKKFGGGKSFGKSYKTAPAKPVDTKNPAVGAQAAPKKGGMMGGLLGGLLAGGLFAYLL GSGAFEGLQGMDMLLIALLALGAVFLFRAMRKSKAPSPQPQTAYAGYQPPSATPQQFEQSSSASQATGFADSDVPFRLPP GFDMNSFLSGARDHYRTLQEAWNTNDLEKVREYVSPELFEQLKAERAELTGEQHTEVMYVDTQLVRADYGSDWAQVSVRF SGRYMDRQEQVEEDIKEVWHLERNLAKDNAPWHIVGIEQL
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30539; Mature: 30539
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMLTLFAVILAIGLGAPIAEAKKFGGGKSFGKSYKTAPAKPVDTKNPAVGAQAAPKKG CHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC GMMGGLLGGLLAGGLFAYLLGSGAFEGLQGMDMLLIALLALGAVFLFRAMRKSKAPSPQP CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QTAYAGYQPPSATPQQFEQSSSASQATGFADSDVPFRLPPGFDMNSFLSGARDHYRTLQE CCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH AWNTNDLEKVREYVSPELFEQLKAERAELTGEQHTEVMYVDTQLVRADYGSDWAQVSVRF HCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEEE SGRYMDRQEQVEEDIKEVWHLERNLAKDNAPWHIVGIEQL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC >Mature Secondary Structure MKKMLTLFAVILAIGLGAPIAEAKKFGGGKSFGKSYKTAPAKPVDTKNPAVGAQAAPKKG CHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC GMMGGLLGGLLAGGLFAYLLGSGAFEGLQGMDMLLIALLALGAVFLFRAMRKSKAPSPQP CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QTAYAGYQPPSATPQQFEQSSSASQATGFADSDVPFRLPPGFDMNSFLSGARDHYRTLQE CCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH AWNTNDLEKVREYVSPELFEQLKAERAELTGEQHTEVMYVDTQLVRADYGSDWAQVSVRF HCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEEE SGRYMDRQEQVEEDIKEVWHLERNLAKDNAPWHIVGIEQL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA