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The map label for this gene is ycgG [H]

Identifier: 145300173

GI number: 145300173

Start: 3551256

End: 3551993

Strand: Direct

Name: ycgG [H]

Synonym: ASA_3283

Alternate gene names: 145300173

Gene position: 3551256-3551993 (Clockwise)

Preceding gene: 145300167

Following gene: 145300174

Centisome position: 75.52

GC content: 58.94

Gene sequence:

>738_bases
ATGTTTGCGTTCAAAGAAGAGTATCCGACGAGTGACATGGCAACCGTGGCGGTGGCCGAGGTGGCCGTGCCCTTTTATCA
GCCGATCATAGGTCGCGACTGTCAGGTCAAGGGTTATGAAGTTCTGGCCCGACGCTGGGATCCACAACGTCAGAGCTATC
AGGGCATCGACTTTCTCTCCCTCAGCCAGGATGAGTCCCTGCATGTGGATATTGTCATGCTCAGGGCCATCATGCGCGAT
CTGCCAACCTTGGCGAAGGATGGCCCCTGTGCCCTCTCCATCAACCTCAACCCCATGCTGTGCAGCCCGACCTATCAGAA
TCTCTTGCTGCTGGTGCTGCTCCAGGCGAGCAAGGCAGGGATCGAGATCTGGTTCGAGGTGCTGGAACACGCGCCACTGC
ACAGTCAGCACAGAGCCTTGATCGAAGTGCTGCGGGATCATGGCGCCCATATCGCCTGCGATGATTTCGGCACTCTGGAA
TGCAACTTCCAGCGGGTGATGGCGTTGCCTTACGAAATCATCAAGCTGGATCGCTCCCTGCTGCTGCAGGCGGCGCGCAC
GCCCCATGCCCTCAAGATGTTGACCGGTCTGGTGGAATACCTGCAGCGACTCGGCATGAAAGTGGTGTGTGAAGGGGTGG
AAACCCTGACCCATATCGAGGTCGCCAACCGACTCGGCTGCGATTATCAGCAGGGCTACGCCTACGCCATGCCCTCCCCC
CTCTCCCGCTGGGCCTGA

Upstream 100 bases:

>100_bases
GACTACGAAAAATCACGCCAATTATCAGACTATTCCTACGGTGTTTTGATCTTTCCCTCCTGTATTATGCGCAGCCATAT
GCGTCTATCAGGTGAGTGCC

Downstream 100 bases:

>100_bases
TAGGGCTCACACATTCATTGCGACTCGCACTGGCATCAGCTACCTGCCAAATTGCATGATGGCGTGGGGGCGAGTACAAT
CTCGCACCCCGTATATCAGG

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MFAFKEEYPTSDMATVAVAEVAVPFYQPIIGRDCQVKGYEVLARRWDPQRQSYQGIDFLSLSQDESLHVDIVMLRAIMRD
LPTLAKDGPCALSINLNPMLCSPTYQNLLLLVLLQASKAGIEIWFEVLEHAPLHSQHRALIEVLRDHGAHIACDDFGTLE
CNFQRVMALPYEIIKLDRSLLLQAARTPHALKMLTGLVEYLQRLGMKVVCEGVETLTHIEVANRLGCDYQQGYAYAMPSP
LSRWA

Sequences:

>Translated_245_residues
MFAFKEEYPTSDMATVAVAEVAVPFYQPIIGRDCQVKGYEVLARRWDPQRQSYQGIDFLSLSQDESLHVDIVMLRAIMRD
LPTLAKDGPCALSINLNPMLCSPTYQNLLLLVLLQASKAGIEIWFEVLEHAPLHSQHRALIEVLRDHGAHIACDDFGTLE
CNFQRVMALPYEIIKLDRSLLLQAARTPHALKMLTGLVEYLQRLGMKVVCEGVETLTHIEVANRLGCDYQQGYAYAMPSP
LSRWA
>Mature_245_residues
MFAFKEEYPTSDMATVAVAEVAVPFYQPIIGRDCQVKGYEVLARRWDPQRQSYQGIDFLSLSQDESLHVDIVMLRAIMRD
LPTLAKDGPCALSINLNPMLCSPTYQNLLLLVLLQASKAGIEIWFEVLEHAPLHSQHRALIEVLRDHGAHIACDDFGTLE
CNFQRVMALPYEIIKLDRSLLLQAARTPHALKMLTGLVEYLQRLGMKVVCEGVETLTHIEVANRLGCDYQQGYAYAMPSP
LSRWA

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm (Potential). Note=Found associated with the RNA degradosome [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=224, Percent_Identity=27.6785714285714, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786507, Length=235, Percent_Identity=26.3829787234043, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790496, Length=227, Percent_Identity=29.5154185022026, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787541, Length=236, Percent_Identity=26.6949152542373, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI87081921, Length=100, Percent_Identity=35, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081743, Length=233, Percent_Identity=29.1845493562232, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788502, Length=229, Percent_Identity=26.6375545851528, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787055, Length=232, Percent_Identity=26.2931034482759, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87082096, Length=225, Percent_Identity=26.6666666666667, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 27661; Mature: 27661

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAFKEEYPTSDMATVAVAEVAVPFYQPIIGRDCQVKGYEVLARRWDPQRQSYQGIDFLS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHCCCCCCEEE
LSQDESLHVDIVMLRAIMRDLPTLAKDGPCALSINLNPMLCSPTYQNLLLLVLLQASKAG
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCHHHHHHHHHHHHHCCCH
IEIWFEVLEHAPLHSQHRALIEVLRDHGAHIACDDFGTLECNFQRVMALPYEIIKLDRSL
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHH
LLQAARTPHALKMLTGLVEYLQRLGMKVVCEGVETLTHIEVANRLGCDYQQGYAYAMPSP
HHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHCCEEEECCCC
LSRWA
HHHCC
>Mature Secondary Structure
MFAFKEEYPTSDMATVAVAEVAVPFYQPIIGRDCQVKGYEVLARRWDPQRQSYQGIDFLS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHCCCCCCEEE
LSQDESLHVDIVMLRAIMRDLPTLAKDGPCALSINLNPMLCSPTYQNLLLLVLLQASKAG
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCHHHHHHHHHHHHHCCCH
IEIWFEVLEHAPLHSQHRALIEVLRDHGAHIACDDFGTLECNFQRVMALPYEIIKLDRSL
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHH
LLQAARTPHALKMLTGLVEYLQRLGMKVVCEGVETLTHIEVANRLGCDYQQGYAYAMPSP
HHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHCCEEEECCCC
LSRWA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]