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The map label for this gene is ydaL [H]

Identifier: 145300148

GI number: 145300148

Start: 3516323

End: 3516904

Strand: Direct

Name: ydaL [H]

Synonym: ASA_3251

Alternate gene names: 145300148

Gene position: 3516323-3516904 (Clockwise)

Preceding gene: 145300147

Following gene: 145300149

Centisome position: 74.78

GC content: 62.54

Gene sequence:

>582_bases
GTGTATTGCAACGACGAACTCTCACTGTTTCGCAATGAAGTGGCCGATGTGCGCCCCATTCGCAGCGACAATATCCATTC
CCCTGCGGGCAAACCCGTCCCGACGGAAGCGCAACTGGCCCGCCGTCAGGCGGCTACCGCCGAGCAACTGGCACTCGACC
ACCTCACCATGGAGGCGGTGGAGATGCTCGATCCCCATGACATCATCGGTTTCAAGCGCGATGGGGTGCAGGAGGGGGTC
TACAAGAAGCTGCGACTCGGCAAATATGAGTTGCAGGCGAGCCTTGACCTGCATCAGAAGACCCTTAATGAGGCGCGTCA
GGTGCTGGTGCAATTCATTGCGGATTGCGAGGTGCGGGACATCCGCTGCCTGCTGATCCTGCACGGCAAGGGGGAGCGCA
GCACGCCGCGAGCCCTGCTCAAGAGCTATGTCAGCGCCTGGTTGCCGCAACTGCCCGCCGTCATGGCCATCCACAGCGCA
GAGCGCCGCCACGGTGGCAGCGGCGCCCTCTATGTGCTGCTGCGAAAAAGCGATCGCCAGAAGGCGGAGAACCGCGAGCG
ACACCAGAAGCGGCTCGGCTAG

Upstream 100 bases:

>100_bases
CTGCCTGTCGGCCAGCATCAGCCGGCCGATGCTGGCCGCCATTTTCTGACTCGCCCCCGCCCGCTATAATGCCCGCTCAT
TCCAATGCGGGGAGCCTGCC

Downstream 100 bases:

>100_bases
TCAGCAACCGTCATCTGGTCAGGCCCCTTCAGCCAGGGTGGTAAACGCGCGATGGCAGTGTTAGCATCGATCGGCCCCGA
TCATGCCAGGTACGGGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MYCNDELSLFRNEVADVRPIRSDNIHSPAGKPVPTEAQLARRQAATAEQLALDHLTMEAVEMLDPHDIIGFKRDGVQEGV
YKKLRLGKYELQASLDLHQKTLNEARQVLVQFIADCEVRDIRCLLILHGKGERSTPRALLKSYVSAWLPQLPAVMAIHSA
ERRHGGSGALYVLLRKSDRQKAENRERHQKRLG

Sequences:

>Translated_193_residues
MYCNDELSLFRNEVADVRPIRSDNIHSPAGKPVPTEAQLARRQAATAEQLALDHLTMEAVEMLDPHDIIGFKRDGVQEGV
YKKLRLGKYELQASLDLHQKTLNEARQVLVQFIADCEVRDIRCLLILHGKGERSTPRALLKSYVSAWLPQLPAVMAIHSA
ERRHGGSGALYVLLRKSDRQKAENRERHQKRLG
>Mature_193_residues
MYCNDELSLFRNEVADVRPIRSDNIHSPAGKPVPTEAQLARRQAATAEQLALDHLTMEAVEMLDPHDIIGFKRDGVQEGV
YKKLRLGKYELQASLDLHQKTLNEARQVLVQFIADCEVRDIRCLLILHGKGERSTPRALLKSYVSAWLPQLPAVMAIHSA
ERRHGGSGALYVLLRKSDRQKAENRERHQKRLG

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1787602, Length=190, Percent_Identity=39.4736842105263, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1788671, Length=172, Percent_Identity=33.1395348837209, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 21879; Mature: 21879

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCNDELSLFRNEVADVRPIRSDNIHSPAGKPVPTEAQLARRQAATAEQLALDHLTMEAV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EMLDPHDIIGFKRDGVQEGVYKKLRLGKYELQASLDLHQKTLNEARQVLVQFIADCEVRD
HHCCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IRCLLILHGKGERSTPRALLKSYVSAWLPQLPAVMAIHSAERRHGGSGALYVLLRKSDRQ
EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHH
KAENRERHQKRLG
HHHHHHHHHHHCC
>Mature Secondary Structure
MYCNDELSLFRNEVADVRPIRSDNIHSPAGKPVPTEAQLARRQAATAEQLALDHLTMEAV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EMLDPHDIIGFKRDGVQEGVYKKLRLGKYELQASLDLHQKTLNEARQVLVQFIADCEVRD
HHCCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IRCLLILHGKGERSTPRALLKSYVSAWLPQLPAVMAIHSAERRHGGSGALYVLLRKSDRQ
EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHH
KAENRERHQKRLG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]