| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is nhaA1 [H]
Identifier: 145300114
GI number: 145300114
Start: 3484328
End: 3485077
Strand: Direct
Name: nhaA1 [H]
Synonym: ASA_3216
Alternate gene names: 145300114
Gene position: 3484328-3485077 (Clockwise)
Preceding gene: 145300112
Following gene: 145300136
Centisome position: 74.1
GC content: 59.6
Gene sequence:
>750_bases ATGAGAATCAAACATGCCCTGCTTTGCGCCCTGACTGGCGCCACCCTGCTTGCGGCGCCGGTTCAGGCAAGCGAGCTGAC CAAGAGCGATGTCGAGCAAATCGTGCGCGACTATCTGGTCAAGAATCCGGAGATCCTGGTCGAGATGTCCAATGCCCTGC GTGCCAAGCAGGAGAGCCAGCAGGCGGCCAACGACAAAAGCCTGATCGAGGCGCACGCCAAGCAGCTCTATTCCAATAAG GATCCCGAGAGCGGCAACCCCAAGGGCAGCCTGACCGTGGTCGAGTTCTTCGATTACAACTGCGGTTACTGCAAGCGCGC CCATCCGCTGATCAAGCAACTGCTGGGTGAAGACAAGGATATCCGCTACATCTACAAGCAGTTCCCCATCCTGAGCGAGA GCTCCTACTTCGCCGCCCGGGCGGCGCTGGCGGTGCAACTGGGTCAACCTGACAAGTACCAGGCCTTCCACGAGAAGCTG TATGCCCATCAGGGCCCGCTGTCCGATGAAGCCCAGGTGAAGCAGTTAGCGGAAGCGGCCGGGGTGAACTGGAGCAAGGT CGAGGCCAAGATCAAGGACGGCAGCATAGATCAGAACCTCGGCACCAACCGGGCGCTGGCCGAAGCCATGAGTATCTCAG GCACACCGGCCTTCATCATAGGTGACCAGATACTGCGTGGCGCACCCCGCGATCTGGCGAGCCTGAAAGGCTTCATCAAG GATGTGCGAGCGGGCAAGAGCATTCAGTAA
Upstream 100 bases:
>100_bases AAAACGGGCAGAAACAGCGCTTTTTCAACCAGATAACTTGACTTGAAAACAGACTCACCCACTATAGTGACCATCACGAA ATTCCCAGCAAGATGGACTT
Downstream 100 bases:
>100_bases CTAGGCCCTTCGCACATAAAAAAACGCCCCGGCATTGCGATGCCGGGGCGTTTTGCCATTCAGGCTTTAGCCCTCAGAAC TCCTGGGCCGTCGCGAGGAG
Product: DsbA family, Com1-like subfamily protein
Products: NA
Alternate protein names: Sodium/proton antiporter nhaA 1 [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MRIKHALLCALTGATLLAAPVQASELTKSDVEQIVRDYLVKNPEILVEMSNALRAKQESQQAANDKSLIEAHAKQLYSNK DPESGNPKGSLTVVEFFDYNCGYCKRAHPLIKQLLGEDKDIRYIYKQFPILSESSYFAARAALAVQLGQPDKYQAFHEKL YAHQGPLSDEAQVKQLAEAAGVNWSKVEAKIKDGSIDQNLGTNRALAEAMSISGTPAFIIGDQILRGAPRDLASLKGFIK DVRAGKSIQ
Sequences:
>Translated_249_residues MRIKHALLCALTGATLLAAPVQASELTKSDVEQIVRDYLVKNPEILVEMSNALRAKQESQQAANDKSLIEAHAKQLYSNK DPESGNPKGSLTVVEFFDYNCGYCKRAHPLIKQLLGEDKDIRYIYKQFPILSESSYFAARAALAVQLGQPDKYQAFHEKL YAHQGPLSDEAQVKQLAEAAGVNWSKVEAKIKDGSIDQNLGTNRALAEAMSISGTPAFIIGDQILRGAPRDLASLKGFIK DVRAGKSIQ >Mature_249_residues MRIKHALLCALTGATLLAAPVQASELTKSDVEQIVRDYLVKNPEILVEMSNALRAKQESQQAANDKSLIEAHAKQLYSNK DPESGNPKGSLTVVEFFDYNCGYCKRAHPLIKQLLGEDKDIRYIYKQFPILSESSYFAARAALAVQLGQPDKYQAFHEKL YAHQGPLSDEAQVKQLAEAAGVNWSKVEAKIKDGSIDQNLGTNRALAEAMSISGTPAFIIGDQILRGAPRDLASLKGFIK DVRAGKSIQ
Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023171 - InterPro: IPR004670 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA; PF06965 Na_H_antiport_1 [H]
EC number: NA
Molecular weight: Translated: 27316; Mature: 27316
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKHALLCALTGATLLAAPVQASELTKSDVEQIVRDYLVKNPEILVEMSNALRAKQESQ CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHH QAANDKSLIEAHAKQLYSNKDPESGNPKGSLTVVEFFDYNCGYCKRAHPLIKQLLGEDKD HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCH IRYIYKQFPILSESSYFAARAALAVQLGQPDKYQAFHEKLYAHQGPLSDEAQVKQLAEAA HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GVNWSKVEAKIKDGSIDQNLGTNRALAEAMSISGTPAFIIGDQILRGAPRDLASLKGFIK CCCHHHHEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHCCCCHHHHHHHHHHH DVRAGKSIQ HHHCCCCCC >Mature Secondary Structure MRIKHALLCALTGATLLAAPVQASELTKSDVEQIVRDYLVKNPEILVEMSNALRAKQESQ CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHH QAANDKSLIEAHAKQLYSNKDPESGNPKGSLTVVEFFDYNCGYCKRAHPLIKQLLGEDKD HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCH IRYIYKQFPILSESSYFAARAALAVQLGQPDKYQAFHEKLYAHQGPLSDEAQVKQLAEAA HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GVNWSKVEAKIKDGSIDQNLGTNRALAEAMSISGTPAFIIGDQILRGAPRDLASLKGFIK CCCHHHHEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHCCCCHHHHHHHHHHH DVRAGKSIQ HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA