| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is merA [H]
Identifier: 145299732
GI number: 145299732
Start: 3010227
End: 3012392
Strand: Direct
Name: merA [H]
Synonym: ASA_2809
Alternate gene names: 145299732
Gene position: 3010227-3012392 (Clockwise)
Preceding gene: 145299731
Following gene: 145299733
Centisome position: 64.01
GC content: 63.76
Gene sequence:
>2166_bases ATGAAGCGCGCCCGCCTGCTGCTTCTGCTGGTGATGGGGTGCCTGATTGGCGCCTTTTTCGCCCTCGATCTCGGCCGCTA CCTGAGCCTGTCCCAGTTGCAGGCCCACCAGGATGCACTGGCACAGCTGGTCAACACCCATTTTGTCGCCGCCTGCCTGC TGTTTGTGGCTCTCTATGTGATCAGTACCGCCCTCTCACTGCCCGGCGCCAGCCTGCTGACCCTGGGGGGCAGCGCTGTA TTCGGTATTGGCTGGGGGCTGCTGCTGGTCTCCTTTGCCAGTACGATCGGAGCGACACTGGCTTTTCTCAGCGCCCGCTT TCTGCTGCGCGACTGGGTGCTCAGGCACTTTGGCGACAAGCTGGCCACGTTTCAGGCCGGCATGGCAAAAGACGGCGCCG CCTACCTGCTGAGCCTGCGCCTCATCCCGCTCTTCCCCTTCTTTCTGGTCAATCTGTTGATGGGGCTCACTCCCATCAGA GTCAGTACCTACTACTGGGTGAGCCAGCTTGGCATGCTGCCCGGCACCTTCGTCTATGTGCTGGCGGGGAGTGAGCTGGC GACCCTCACCAGCACGGGCAATATTCTCTCCCCCGGCCTGATGGTGGCGCTGACCTTGCTGGGACTGATGCCCTTTTTGA TGAAGAGGGCGATGACATGGCTGGCCCAGCGTCGCCTCCATGCCCCCTATCAAAAGCCAAGCCGCTATGACTACAACCTG CTGGTGATAGGTGCCGGCGCCGGTGGTCTGGTGACCAGCTATATCGCCGCGGCGGTGAAGGCCAACGTCGCCCTTATCGA GAAGCACAGGATGGGCGGGGACTGCCTCAATACCGGCTGCGTTCCCTCCAAGGCACTGATCCGAAGTAGCCGCTTTGCCG CCGAGCAGCGCAAGGCCGGGGAACTGGGCTTTAGCCCAAGTCACTCCCGCGCCGATTTTGCCGCCGTGATGGAGCGGGTG GCACAGGTGATCAAGGAGGTCGAACCCCACGACTCGGTGGCGCGCTATCAGAACCTGGGCGTGGAGTGCATCGAGGGCGA AGCAAAACTGGTCTCCCCCTGGGAGGTGGAGGTGAATGGCCGGCGCCTCACCAGCCGCCATATCGTGATCGCCACCGGGG CCAGGCCCCTGGTGCCCAACCTGCCCGGATTGGCCGACACGCCTTATCTCACCTCGGATACCCTCTGGCAGCTGCGCACC CCGCCCCGCCGCCTGCTGGTGCTTGGCGGCGGCCCCATCGGCTGCGAGCTGGCCCAGAGTTTTGCCCTGCTTGGCATCCC GGTAACCCAAGTGGAGCTGGCCGATCAGCTGCTGCCTCGTGAAGAGCGCGACGTAGCCGATGCCCTGCAACACCAGATGG TAGCGGACGGCGTCACCCTGCTCACCGGCTGGCGTGCCGAGCGGGTCGACTATGTGCCGCAAGAAGGGAGTGAGCAAGGG GAACACCTCCCCATCCGGCTCCACCTGTGTCGGGGCGATCAACGCCTGATGGTTGAAGGGGATCAACTGCTGCTGGCACT GGGACGGGTTGCAAATGTCAGCGGCTTCGGCCTCGAAACGCTGGGGGTCGAGCTGGCGCCACGCGGCACCATTGCTGTCG ATGGTTTTCTCGCCACCAACTACCCCAGCATACTGGCGGTGGGGGACGTGGCAGGCCCCTACCAGTTCACTCATTTTGCC GCCCATCAGGCCTGGCATGCCGCCGTCAATGCCCTGTTCGGCCAGTTCAAACGCTTCAAGGCAGATTACAGCGTGATCCC TGCGGCGACCTACACCAGCCCTGAAATAGCCAGGGTGGGTCTCAACCGCAAGGAGGCCATGGCTCAAGGAATCCCCTTCG AGGTGACCCGCTTCGCGCTAGGGGAGCTGGATCGCGCCATTGCCGATGGGGAGCGCCATGGCTTTATCGAGGTGCTGACG GTGCCCGGCAAAGACAAGATCCTCGGCGCCACCATAGTGGGCACTCACGCCGGTGAGCGGCTCGCCGAATTCGTGCTCGC CATGCGCCACCAGCTGGGGCTTGGCAAAATACTCGCCACCATCCACGCCTATCCCACCCTGATGGAGGGGAACAAGTACG TGGCCGGTGAATGGAAACGGGCCCATCAGCCCACTCGGGTGCTGGCCCTGCTGGCCCGTTATCACCACTGGCGCCGCGGC GCCTGA
Upstream 100 bases:
>100_bases ATGCGGCCCTCGATATTGCCCCCCAGGGTTTCTGCCAGTTGCCGGTGCAACCTGAGCGCCCCGTGGCAGCTCAAGAACAG CAGCCCGGCAAGGACGCCTG
Downstream 100 bases:
>100_bases CCCTTTGCCCAAGGTAACGCCCATGTTCAAGACCCTGCCTTTGCTCAAATCCCTGTTGTGCGCCCTGCCCCTGCTGGCAA GCTGCACACTCTTTGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MKRARLLLLLVMGCLIGAFFALDLGRYLSLSQLQAHQDALAQLVNTHFVAACLLFVALYVISTALSLPGASLLTLGGSAV FGIGWGLLLVSFASTIGATLAFLSARFLLRDWVLRHFGDKLATFQAGMAKDGAAYLLSLRLIPLFPFFLVNLLMGLTPIR VSTYYWVSQLGMLPGTFVYVLAGSELATLTSTGNILSPGLMVALTLLGLMPFLMKRAMTWLAQRRLHAPYQKPSRYDYNL LVIGAGAGGLVTSYIAAAVKANVALIEKHRMGGDCLNTGCVPSKALIRSSRFAAEQRKAGELGFSPSHSRADFAAVMERV AQVIKEVEPHDSVARYQNLGVECIEGEAKLVSPWEVEVNGRRLTSRHIVIATGARPLVPNLPGLADTPYLTSDTLWQLRT PPRRLLVLGGGPIGCELAQSFALLGIPVTQVELADQLLPREERDVADALQHQMVADGVTLLTGWRAERVDYVPQEGSEQG EHLPIRLHLCRGDQRLMVEGDQLLLALGRVANVSGFGLETLGVELAPRGTIAVDGFLATNYPSILAVGDVAGPYQFTHFA AHQAWHAAVNALFGQFKRFKADYSVIPAATYTSPEIARVGLNRKEAMAQGIPFEVTRFALGELDRAIADGERHGFIEVLT VPGKDKILGATIVGTHAGERLAEFVLAMRHQLGLGKILATIHAYPTLMEGNKYVAGEWKRAHQPTRVLALLARYHHWRRG A
Sequences:
>Translated_721_residues MKRARLLLLLVMGCLIGAFFALDLGRYLSLSQLQAHQDALAQLVNTHFVAACLLFVALYVISTALSLPGASLLTLGGSAV FGIGWGLLLVSFASTIGATLAFLSARFLLRDWVLRHFGDKLATFQAGMAKDGAAYLLSLRLIPLFPFFLVNLLMGLTPIR VSTYYWVSQLGMLPGTFVYVLAGSELATLTSTGNILSPGLMVALTLLGLMPFLMKRAMTWLAQRRLHAPYQKPSRYDYNL LVIGAGAGGLVTSYIAAAVKANVALIEKHRMGGDCLNTGCVPSKALIRSSRFAAEQRKAGELGFSPSHSRADFAAVMERV AQVIKEVEPHDSVARYQNLGVECIEGEAKLVSPWEVEVNGRRLTSRHIVIATGARPLVPNLPGLADTPYLTSDTLWQLRT PPRRLLVLGGGPIGCELAQSFALLGIPVTQVELADQLLPREERDVADALQHQMVADGVTLLTGWRAERVDYVPQEGSEQG EHLPIRLHLCRGDQRLMVEGDQLLLALGRVANVSGFGLETLGVELAPRGTIAVDGFLATNYPSILAVGDVAGPYQFTHFA AHQAWHAAVNALFGQFKRFKADYSVIPAATYTSPEIARVGLNRKEAMAQGIPFEVTRFALGELDRAIADGERHGFIEVLT VPGKDKILGATIVGTHAGERLAEFVLAMRHQLGLGKILATIHAYPTLMEGNKYVAGEWKRAHQPTRVLALLARYHHWRRG A >Mature_721_residues MKRARLLLLLVMGCLIGAFFALDLGRYLSLSQLQAHQDALAQLVNTHFVAACLLFVALYVISTALSLPGASLLTLGGSAV FGIGWGLLLVSFASTIGATLAFLSARFLLRDWVLRHFGDKLATFQAGMAKDGAAYLLSLRLIPLFPFFLVNLLMGLTPIR VSTYYWVSQLGMLPGTFVYVLAGSELATLTSTGNILSPGLMVALTLLGLMPFLMKRAMTWLAQRRLHAPYQKPSRYDYNL LVIGAGAGGLVTSYIAAAVKANVALIEKHRMGGDCLNTGCVPSKALIRSSRFAAEQRKAGELGFSPSHSRADFAAVMERV AQVIKEVEPHDSVARYQNLGVECIEGEAKLVSPWEVEVNGRRLTSRHIVIATGARPLVPNLPGLADTPYLTSDTLWQLRT PPRRLLVLGGGPIGCELAQSFALLGIPVTQVELADQLLPREERDVADALQHQMVADGVTLLTGWRAERVDYVPQEGSEQG EHLPIRLHLCRGDQRLMVEGDQLLLALGRVANVSGFGLETLGVELAPRGTIAVDGFLATNYPSILAVGDVAGPYQFTHFA AHQAWHAAVNALFGQFKRFKADYSVIPAATYTSPEIARVGLNRKEAMAQGIPFEVTRFALGELDRAIADGERHGFIEVLT VPGKDKILGATIVGTHAGERLAEFVLAMRHQLGLGKILATIHAYPTLMEGNKYVAGEWKRAHQPTRVLALLARYHHWRRG A
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=470, Percent_Identity=30, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI50301238, Length=467, Percent_Identity=28.4796573875803, Blast_Score=148, Evalue=2e-35, Organism=Homo sapiens, GI148277065, Length=489, Percent_Identity=25.1533742331288, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI148277071, Length=489, Percent_Identity=25.1533742331288, Blast_Score=102, Evalue=2e-21, Organism=Homo sapiens, GI33519430, Length=488, Percent_Identity=25.2049180327869, Blast_Score=102, Evalue=2e-21, Organism=Homo sapiens, GI33519428, Length=488, Percent_Identity=25.2049180327869, Blast_Score=102, Evalue=2e-21, Organism=Homo sapiens, GI33519426, Length=488, Percent_Identity=25.2049180327869, Blast_Score=102, Evalue=2e-21, Organism=Homo sapiens, GI22035672, Length=481, Percent_Identity=26.4033264033264, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI291045266, Length=438, Percent_Identity=24.6575342465753, Blast_Score=90, Evalue=7e-18, Organism=Homo sapiens, GI18087813, Length=188, Percent_Identity=28.7234042553192, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI291045268, Length=339, Percent_Identity=25.6637168141593, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1786307, Length=458, Percent_Identity=30.7860262008734, Blast_Score=192, Evalue=6e-50, Organism=Escherichia coli, GI87082354, Length=482, Percent_Identity=29.045643153527, Blast_Score=163, Evalue=3e-41, Organism=Escherichia coli, GI87081717, Length=463, Percent_Identity=26.7818574514039, Blast_Score=153, Evalue=3e-38, Organism=Escherichia coli, GI1789915, Length=439, Percent_Identity=28.246013667426, Blast_Score=129, Evalue=9e-31, Organism=Escherichia coli, GI87081964, Length=138, Percent_Identity=42.0289855072464, Blast_Score=89, Evalue=7e-19, Organism=Caenorhabditis elegans, GI32565766, Length=501, Percent_Identity=28.1437125748503, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17557007, Length=496, Percent_Identity=26.2096774193548, Blast_Score=132, Evalue=7e-31, Organism=Caenorhabditis elegans, GI71983419, Length=374, Percent_Identity=28.3422459893048, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71983429, Length=374, Percent_Identity=28.3422459893048, Blast_Score=120, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71982272, Length=497, Percent_Identity=24.1448692152917, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17532687, Length=180, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI115533280, Length=177, Percent_Identity=25.9887005649718, Blast_Score=71, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321091, Length=470, Percent_Identity=28.5106382978723, Blast_Score=162, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6325166, Length=474, Percent_Identity=26.3713080168776, Blast_Score=137, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6325240, Length=476, Percent_Identity=24.3697478991597, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI21358499, Length=470, Percent_Identity=29.5744680851064, Blast_Score=186, Evalue=7e-47, Organism=Drosophila melanogaster, GI17737741, Length=503, Percent_Identity=26.441351888668, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI24640549, Length=495, Percent_Identity=27.6767676767677, Blast_Score=119, Evalue=1e-26, Organism=Drosophila melanogaster, GI24640551, Length=512, Percent_Identity=27.1484375, Blast_Score=119, Evalue=1e-26, Organism=Drosophila melanogaster, GI24640553, Length=501, Percent_Identity=27.1457085828343, Blast_Score=118, Evalue=1e-26,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 78325; Mature: 78325
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRARLLLLLVMGCLIGAFFALDLGRYLSLSQLQAHQDALAQLVNTHFVAACLLFVALYV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISTALSLPGASLLTLGGSAVFGIGWGLLLVSFASTIGATLAFLSARFLLRDWVLRHFGDK HHHHHHCCCCCEEHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH LATFQAGMAKDGAAYLLSLRLIPLFPFFLVNLLMGLTPIRVSTYYWVSQLGMLPGTFVYV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEE LAGSELATLTSTGNILSPGLMVALTLLGLMPFLMKRAMTWLAQRRLHAPYQKPSRYDYNL EECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE LVIGAGAGGLVTSYIAAAVKANVALIEKHRMGGDCLNTGCVPSKALIRSSRFAAEQRKAG EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC ELGFSPSHSRADFAAVMERVAQVIKEVEPHDSVARYQNLGVECIEGEAKLVSPWEVEVNG CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCEEECCEEEEECC RRLTSRHIVIATGARPLVPNLPGLADTPYLTSDTLWQLRTPPRRLLVLGGGPIGCELAQS EEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCHHHHHH FALLGIPVTQVELADQLLPREERDVADALQHQMVADGVTLLTGWRAERVDYVPQEGSEQG HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHEEECCCHHHCCCCCCCCCCCC EHLPIRLHLCRGDQRLMVEGDQLLLALGRVANVSGFGLETLGVELAPRGTIAVDGFLATN CCCCEEEEEECCCCEEEEECHHHHHHHHHHCCCCCCCHHHHCEEECCCCCEEECCEEECC YPSILAVGDVAGPYQFTHFAAHQAWHAAVNALFGQFKRFKADYSVIPAATYTSPEIARVG CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHC LNRKEAMAQGIPFEVTRFALGELDRAIADGERHGFIEVLTVPGKDKILGATIVGTHAGER CCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCHHH LAEFVLAMRHQLGLGKILATIHAYPTLMEGNKYVAGEWKRAHQPTRVLALLARYHHWRRG HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCHHHCCHHHHHHHHHHHHHHCCC A C >Mature Secondary Structure MKRARLLLLLVMGCLIGAFFALDLGRYLSLSQLQAHQDALAQLVNTHFVAACLLFVALYV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISTALSLPGASLLTLGGSAVFGIGWGLLLVSFASTIGATLAFLSARFLLRDWVLRHFGDK HHHHHHCCCCCEEHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH LATFQAGMAKDGAAYLLSLRLIPLFPFFLVNLLMGLTPIRVSTYYWVSQLGMLPGTFVYV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEE LAGSELATLTSTGNILSPGLMVALTLLGLMPFLMKRAMTWLAQRRLHAPYQKPSRYDYNL EECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE LVIGAGAGGLVTSYIAAAVKANVALIEKHRMGGDCLNTGCVPSKALIRSSRFAAEQRKAG EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC ELGFSPSHSRADFAAVMERVAQVIKEVEPHDSVARYQNLGVECIEGEAKLVSPWEVEVNG CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCEEECCEEEEECC RRLTSRHIVIATGARPLVPNLPGLADTPYLTSDTLWQLRTPPRRLLVLGGGPIGCELAQS EEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCHHHHHH FALLGIPVTQVELADQLLPREERDVADALQHQMVADGVTLLTGWRAERVDYVPQEGSEQG HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHEEECCCHHHCCCCCCCCCCCC EHLPIRLHLCRGDQRLMVEGDQLLLALGRVANVSGFGLETLGVELAPRGTIAVDGFLATN CCCCEEEEEECCCCEEEEECHHHHHHHHHHCCCCCCCHHHHCEEECCCCCEEECCEEECC YPSILAVGDVAGPYQFTHFAAHQAWHAAVNALFGQFKRFKADYSVIPAATYTSPEIARVG CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHC LNRKEAMAQGIPFEVTRFALGELDRAIADGERHGFIEVLTVPGKDKILGATIVGTHAGER CCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCHHH LAEFVLAMRHQLGLGKILATIHAYPTLMEGNKYVAGEWKRAHQPTRVLALLARYHHWRRG HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCHHHCCHHHHHHHHHHHHHHCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536669; 10559175; 2067577 [H]