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The map label for this gene is ynjB [H]

Identifier: 145299733

GI number: 145299733

Start: 3012415

End: 3013599

Strand: Direct

Name: ynjB [H]

Synonym: ASA_2810

Alternate gene names: 145299733

Gene position: 3012415-3013599 (Clockwise)

Preceding gene: 145299732

Following gene: 145299734

Centisome position: 64.06

GC content: 63.21

Gene sequence:

>1185_bases
ATGTTCAAGACCCTGCCTTTGCTCAAATCCCTGTTGTGCGCCCTGCCCCTGCTGGCAAGCTGCACACTCTTTGCCGATGA
CACTGCCGACGAGGGATCCCGTTGGCAGCAGACCCTTGATCAGGCGAAGGGCCAGACCGTCTACTTCAACGCCTGGGGCG
GCAGCCCGGAGATCAACACCTATCTGGTGTGGGCGGGACAGGAGCTTGAGCGCCAGTATCAGGTCAAGCTGGTACAGGTG
AAAGTGGATGACATAGCCCAGAGCGTCAGCCAGCTGCTGGCCAACAAACAGGCCGGCAAAACCACGGGCGGCCCCATCGA
TCTGCTCTGGGTCAACGGCGAGAATTTCAAGGCGCTCAAGGAGCAGGGGCTGTTGGGTGCCCCCTTCAGCCATGAGCTGC
CCAACATGGCCCTGGTAGACAAGAGCCTGCCGGTGAGTGAGGACTTCACGGTACCGGTAGAGGGGCTGGAGGCACCCTGG
GGCATAGGCCAGCTCAACCTGATGGTGAATGGGGACGAGGTGAGCAATCCCCCCCGCTCCGCAGAGGCGCTGCTCGCCTG
GGCCAAGGCCCATCCCGGTCGTTTCAGCTATCCCAAGCCGCCCCAGTTTCATGGTTCCAGCTTTCTCAAACAGATATTGC
TGGAGCTGACCCCGGATCCTGCCCCCCTCTATCGGGAGGCAACCGATGCCGATTTTGCCAGACTCACAGCGCCGCTCTGG
GTCTGGCTCGACGCATTTCACCCCGCACTCTGGCGCAAGGGCAAGCTGTTCCCCACCGGCGCCGCCGAGACCCGCCAGTT
GCTGGATGACGGTGAGCTGGCCATGGCCATCAGCTTCAACCCGCAAGAAGCGCAGAGTGCGGTGCAAAACGGCGCCCTGC
CCCCCAGCGTGGTGGCCGTGGCCATGGAGAAAGGGGCGCTCACCAACAGCCATTTTCTCGCCATTCCCTTCAACGCCAAC
GCCCGCACGGGTGCCAAGGTGGTAGCCAACTTTCTGCTGAGCCCGGCAGCCCAGGCCCGCAAGGCCGAGCCCACCTTTTG
GGGCGATCCCAGCGTGCTGCGCAGCGATGCCTTGCCAGCGACCACCAAACAGGTACCAGCCCTGCGCTTCAAGGCGGTGG
CTGAACCCCATCCCAGCTGGCAGACCAAACTCGAAGCGGCCTGGGCCGAGCGTTACGGTCACTGA

Upstream 100 bases:

>100_bases
GAATGGAAACGGGCCCATCAGCCCACTCGGGTGCTGGCCCTGCTGGCCCGTTATCACCACTGGCGCCGCGGCGCCTGACC
CTTTGCCCAAGGTAACGCCC

Downstream 100 bases:

>100_bases
TGACGGCAGGACTCGGCAACGCCATCCGCCGCACCTTCGGCTGGCGCCCCATGTTTACCCTTCTCTGCGCCCTCCTGCTG
GCCGCCCCCCTGCTGGGAGG

Product: ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MFKTLPLLKSLLCALPLLASCTLFADDTADEGSRWQQTLDQAKGQTVYFNAWGGSPEINTYLVWAGQELERQYQVKLVQV
KVDDIAQSVSQLLANKQAGKTTGGPIDLLWVNGENFKALKEQGLLGAPFSHELPNMALVDKSLPVSEDFTVPVEGLEAPW
GIGQLNLMVNGDEVSNPPRSAEALLAWAKAHPGRFSYPKPPQFHGSSFLKQILLELTPDPAPLYREATDADFARLTAPLW
VWLDAFHPALWRKGKLFPTGAAETRQLLDDGELAMAISFNPQEAQSAVQNGALPPSVVAVAMEKGALTNSHFLAIPFNAN
ARTGAKVVANFLLSPAAQARKAEPTFWGDPSVLRSDALPATTKQVPALRFKAVAEPHPSWQTKLEAAWAERYGH

Sequences:

>Translated_394_residues
MFKTLPLLKSLLCALPLLASCTLFADDTADEGSRWQQTLDQAKGQTVYFNAWGGSPEINTYLVWAGQELERQYQVKLVQV
KVDDIAQSVSQLLANKQAGKTTGGPIDLLWVNGENFKALKEQGLLGAPFSHELPNMALVDKSLPVSEDFTVPVEGLEAPW
GIGQLNLMVNGDEVSNPPRSAEALLAWAKAHPGRFSYPKPPQFHGSSFLKQILLELTPDPAPLYREATDADFARLTAPLW
VWLDAFHPALWRKGKLFPTGAAETRQLLDDGELAMAISFNPQEAQSAVQNGALPPSVVAVAMEKGALTNSHFLAIPFNAN
ARTGAKVVANFLLSPAAQARKAEPTFWGDPSVLRSDALPATTKQVPALRFKAVAEPHPSWQTKLEAAWAERYGH
>Mature_394_residues
MFKTLPLLKSLLCALPLLASCTLFADDTADEGSRWQQTLDQAKGQTVYFNAWGGSPEINTYLVWAGQELERQYQVKLVQV
KVDDIAQSVSQLLANKQAGKTTGGPIDLLWVNGENFKALKEQGLLGAPFSHELPNMALVDKSLPVSEDFTVPVEGLEAPW
GIGQLNLMVNGDEVSNPPRSAEALLAWAKAHPGRFSYPKPPQFHGSSFLKQILLELTPDPAPLYREATDADFARLTAPLW
VWLDAFHPALWRKGKLFPTGAAETRQLLDDGELAMAISFNPQEAQSAVQNGALPPSVVAVAMEKGALTNSHFLAIPFNAN
ARTGAKVVANFLLSPAAQARKAEPTFWGDPSVLRSDALPATTKQVPALRFKAVAEPHPSWQTKLEAAWAERYGH

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=370, Percent_Identity=48.3783783783784, Blast_Score=332, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 42936; Mature: 42936

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKTLPLLKSLLCALPLLASCTLFADDTADEGSRWQQTLDQAKGQTVYFNAWGGSPEINT
CCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCE
YLVWAGQELERQYQVKLVQVKVDDIAQSVSQLLANKQAGKTTGGPIDLLWVNGENFKALK
EEEECCHHHHHCEEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHH
EQGLLGAPFSHELPNMALVDKSLPVSEDFTVPVEGLEAPWGIGQLNLMVNGDEVSNPPRS
HCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCH
AEALLAWAKAHPGRFSYPKPPQFHGSSFLKQILLELTPDPAPLYREATDADFARLTAPLW
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHH
VWLDAFHPALWRKGKLFPTGAAETRQLLDDGELAMAISFNPQEAQSAVQNGALPPSVVAV
HHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHH
AMEKGALTNSHFLAIPFNANARTGAKVVANFLLSPAAQARKAEPTFWGDPSVLRSDALPA
HHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHCCCCC
TTKQVPALRFKAVAEPHPSWQTKLEAAWAERYGH
CHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKTLPLLKSLLCALPLLASCTLFADDTADEGSRWQQTLDQAKGQTVYFNAWGGSPEINT
CCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCE
YLVWAGQELERQYQVKLVQVKVDDIAQSVSQLLANKQAGKTTGGPIDLLWVNGENFKALK
EEEECCHHHHHCEEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHH
EQGLLGAPFSHELPNMALVDKSLPVSEDFTVPVEGLEAPWGIGQLNLMVNGDEVSNPPRS
HCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCH
AEALLAWAKAHPGRFSYPKPPQFHGSSFLKQILLELTPDPAPLYREATDADFARLTAPLW
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHH
VWLDAFHPALWRKGKLFPTGAAETRQLLDDGELAMAISFNPQEAQSAVQNGALPPSVVAV
HHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHH
AMEKGALTNSHFLAIPFNANARTGAKVVANFLLSPAAQARKAEPTFWGDPSVLRSDALPA
HHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHCCCCC
TTKQVPALRFKAVAEPHPSWQTKLEAAWAERYGH
CHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384 [H]