| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is insN [H]
Identifier: 145299484
GI number: 145299484
Start: 2723687
End: 2723947
Strand: Direct
Name: insN [H]
Synonym: ASA_2548
Alternate gene names: 145299484
Gene position: 2723687-2723947 (Clockwise)
Preceding gene: 145299483
Following gene: 145299485
Centisome position: 57.92
GC content: 53.64
Gene sequence:
>1163_bases ATGACAAGATTACGTTGCTCATTTACTGCCGAATTCAAACTCGAAGCCGCATCCTTGGTGCTCGACCAGGGGTATTCTGT TCCCGAAGCAAGCCGTTCGCTGGATGTCGGTGAAACCGTACTTCGCCGCTGGGTTCAGCAGCTTCAATCCGAACGCTGTG GCACTACCCCAATCAGCAAAGCGCTGACTCCGGAGCAGCAGAAAATCCAGGTGCTGGAAGCCCGTATCAACCGGCTCGAG CGCGAAAAGGACATACTAAAAAAGGCTACTGCTCTCTTGATGGCGGACGAGTTCACACGTACGCGCTGATAGACCGATTA AGGGAGCAAGCCCCCATCACCCTGGTCTGCTGCGCTTTCGATATTCCCACATCCTGTTTTTACGATTATCTGGCTCGCAG GAGAGTGATTAACCGTGAGCGGATGAAACAACGAAGCGAGTTGCGCCGTTTGTTCAAAGAGAGCCGGGATTCCGCAGGCA GCCGCGCCTTGATGTCGATGATGCGAGAGCTGGGGTATCAGATTGGCCGATTCAAAGTCCGTAACCTGATGAAGGAAGCT GGGCTGGCGTCCAAACAGCCGGGCGCACACCGTTATAAGGTTGCATGCTCTGAACGACCGGATATTCCGAATCTGCTGGC CCGCGAATTTGATGTTCCGCAACCCAATCAGGTGTGGTGTGGCGATATCACCTACGTCTGGACAAGTGCTCGTTGGCATT ACTTAGCAGTGGTGCTTGACCTTCATACCCGGCGAGTCGTGGGCTGGGCGATGTCTGACAAGCCTGATGCAGAGCTGGCA ATCAAAGCACTGGAGATGGCCTATCAGCAGCGGGGTTGCCCATCCGGTGTGCTGTTTCACTCCGACCAGGGTAGCCAATA TGGCAGCAGGGCATTTCGGCAACGACTGTGGCGCTATCGCATGACCCAGAGCATGAGTCGGCGTGGCAACTGCTGGGATA ACGCCCCGATGGAGCGATTGTTCAGAAGCCTGAAGTCAGAGTGGCTCCCGGCAACGGGATACATGAGCCTGCGGGAAGCA ACGCGAGATATCAGTTATTACCTGATGGATTACTACAACTGGCGGCGTCCACATCAACACAATGACGGGATACCGCCAGC AAAAGCCGAGACTCGGCCTAACCAAGTGTCCGGATTTAGTTGA
Upstream 100 bases:
>100_bases GGGAGCCAGCTGCCCGCCAGGCGATATCACTTTGTAGTGGTCTAATCATCCCGGACACCATTTTAGGTGGTACAGTCGCC ACCATGACCTGAGGTGTTCA
Downstream 100 bases:
>100_bases TCACTACATTCACACATGAGCCAAATTTGCTCCTGATTCGTCTCGTCCGATAAAATAACCCCATCAGTTACAACCATCAT CACGCTGGTAGCCGTTGGTC
Product: IS3 family transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>387_residues MTRLRCSFTAEFKLEAASLVLDQGYSVPEASRSLDVGETVLRRWVQQLQSERCGTTPISKALTPEQQKIQVLEARINRLE REKDILKKGYCSLDGGRVHTYALIDRLREQAPITLVCCAFDIPTSCFYDYLARRRVINRERMKQRSELRRLFKESRDSAG SRALMSMMRELGYQIGRFKVRNLMKEAGLASKQPGAHRYKVACSERPDIPNLLAREFDVPQPNQVWCGDITYVWTSARWH YLAVVLDLHTRRVVGWAMSDKPDAELAIKALEMAYQQRGCPSGVLFHSDQGSQYGSRAFRQRLWRYRMTQSMSRRGNCWD NAPMERLFRSLKSEWLPATGYMSLREATRDISYYLMDYYNWRRPHQHNDGIPPAKAETRPNQVSGFS
Sequences:
>Translated_87_residues MTRLRCSFTAEFKLEAASLVLDQGYSVPEASRSLDVGETVLRRWVQQLQSERCGTTPISKALTPEQQKIQVLEARINRLE REKDILK >Mature_86_residues TRLRCSFTAEFKLEAASLVLDQGYSVPEASRSLDVGETVLRRWVQQLQSERCGTTPISKALTPEQQKIQVLEARINRLER EKDILK
Specific function: Involved in the transposition of the insertion sequence IS911 [H]
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 9962; Mature: 9830
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLRCSFTAEFKLEAASLVLDQGYSVPEASRSLDVGETVLRRWVQQLQSERCGTTPISK CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC ALTPEQQKIQVLEARINRLEREKDILK CCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRLRCSFTAEFKLEAASLVLDQGYSVPEASRSLDVGETVLRRWVQQLQSERCGTTPISK CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC ALTPEQQKIQVLEARINRLEREKDILK CCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2163395 [H]