| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is ydiA [C]
Identifier: 145299481
GI number: 145299481
Start: 2720483
End: 2721295
Strand: Direct
Name: ydiA [C]
Synonym: ASA_2545
Alternate gene names: 145299481
Gene position: 2720483-2721295 (Clockwise)
Preceding gene: 145299478
Following gene: 145299483
Centisome position: 57.85
GC content: 61.13
Gene sequence:
>813_bases GTGCATACCGTATTCTATGTTTCCGACGGCACTGCCATCACGGCCGAAGTATTCGGCCACGCCGTGTTGAGCCAGTTTCC ACTGGTGTTCGAACAAGTCACCATCCCCTTCGTAGAGACCCTGGAGAAAGCCAGGCAGGTGCGGGCGCGTATCGACGAGC AGTTCCGCCAGACCGGGCTGCGGCCCATACTGTTTCACACCATAGTCGACCCCCTGGTACGAGAAGAGGTGCTCAAGGCC CAGGCGAGCGGCCACGACTTTCTCAACACCTTCGTCAGCCCGCTGGAGCAGGAGCTGGGGGTCAAGGCCGAGCCGAGACT CCATCGCACCCACGGCATGGAGAACCGCAAGCTCTATGACGATCGCATCGAGGCGGTCAACTTCGCACTGGCCAACGACG ACGGCATCACCACCAAGGAGTATGAGGAGGCGGACATCATCCTCATCGGGGTCTCCCGCTGTGGCAAGACGCCGACCAGC CTCTATCTGGCGCTGCAATTTGGCATTCGCGCCGCCAACTATCCCTTTATCGAACAGGACATGGGCGCCTTGGTGCTGCC CACCGCCCTCAAGGCCAATCGCCACAAGCTGTTCGGCCTCACCATAACGCCCCAGCGGCTGCACGAGATCCGCAATCAGC GCCGCGCCAACAGCCGCTACTCTTCGCTGGAGCAGTGCGAGCAGGAGTTGGCAAGCGTGGAGCGGCTATTTCGCCAGGAG GCGATCCGCTTCCTCGACACCAGCTCTCACTCGGTGGAGGAGATAAGCGCGAAAATTCTGGAGGCTACCGGCATGCGCCG TCAGCTCTATTGA
Upstream 100 bases:
>100_bases TTCACAACTTGGACACAGCAGATCGGTTGACAAAATAGATATGGTTTCGAGAGATACTGACTGCTCGCAACCTCGCCAGC CCGCATCACAGGAGCGCATC
Downstream 100 bases:
>100_bases AATGGGAAAATATCCTGGAGATCAACGCACTGCCAACTTCATCCCAGGTGGCAAGTTGACGGGACAGATAAGCAGAAATG AAAACGGAGCCCAATGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MHTVFYVSDGTAITAEVFGHAVLSQFPLVFEQVTIPFVETLEKARQVRARIDEQFRQTGLRPILFHTIVDPLVREEVLKA QASGHDFLNTFVSPLEQELGVKAEPRLHRTHGMENRKLYDDRIEAVNFALANDDGITTKEYEEADIILIGVSRCGKTPTS LYLALQFGIRAANYPFIEQDMGALVLPTALKANRHKLFGLTITPQRLHEIRNQRRANSRYSSLEQCEQELASVERLFRQE AIRFLDTSSHSVEEISAKILEATGMRRQLY
Sequences:
>Translated_270_residues MHTVFYVSDGTAITAEVFGHAVLSQFPLVFEQVTIPFVETLEKARQVRARIDEQFRQTGLRPILFHTIVDPLVREEVLKA QASGHDFLNTFVSPLEQELGVKAEPRLHRTHGMENRKLYDDRIEAVNFALANDDGITTKEYEEADIILIGVSRCGKTPTS LYLALQFGIRAANYPFIEQDMGALVLPTALKANRHKLFGLTITPQRLHEIRNQRRANSRYSSLEQCEQELASVERLFRQE AIRFLDTSSHSVEEISAKILEATGMRRQLY >Mature_270_residues MHTVFYVSDGTAITAEVFGHAVLSQFPLVFEQVTIPFVETLEKARQVRARIDEQFRQTGLRPILFHTIVDPLVREEVLKA QASGHDFLNTFVSPLEQELGVKAEPRLHRTHGMENRKLYDDRIEAVNFALANDDGITTKEYEEADIILIGVSRCGKTPTS LYLALQFGIRAANYPFIEQDMGALVLPTALKANRHKLFGLTITPQRLHEIRNQRRANSRYSSLEQCEQELASVERLFRQE AIRFLDTSSHSVEEISAKILEATGMRRQLY
Specific function: Unknown
COG id: COG1806
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family
Homologues:
Organism=Escherichia coli, GI1787995, Length=269, Percent_Identity=53.9033457249071, Blast_Score=315, Evalue=1e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2545_AERS4 (A4SNV2)
Other databases:
- EMBL: CP000644 - RefSeq: YP_001142322.1 - STRING: A4SNV2 - GeneID: 4995616 - GenomeReviews: CP000644_GR - KEGG: asa:ASA_2545 - eggNOG: COG1806 - HOGENOM: HBG304855 - OMA: MERIEAV - PhylomeDB: A4SNV2 - ProtClustDB: PRK05339 - BioCyc: ASAL382245:ASA_2545-MONOMER - HAMAP: MF_01062 - InterPro: IPR005177
Pfam domain/function: PF03618 DUF299
EC number: NA
Molecular weight: Translated: 30785; Mature: 30785
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTVFYVSDGTAITAEVFGHAVLSQFPLVFEQVTIPFVETLEKARQVRARIDEQFRQTGL CCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPILFHTIVDPLVREEVLKAQASGHDFLNTFVSPLEQELGVKAEPRLHRTHGMENRKLYD CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHH DRIEAVNFALANDDGITTKEYEEADIILIGVSRCGKTPTSLYLALQFGIRAANYPFIEQD HHHHHHHEEEECCCCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCHHHC MGALVLPTALKANRHKLFGLTITPQRLHEIRNQRRANSRYSSLEQCEQELASVERLFRQE CCCEEEHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIRFLDTSSHSVEEISAKILEATGMRRQLY HHHHHCCCCCHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MHTVFYVSDGTAITAEVFGHAVLSQFPLVFEQVTIPFVETLEKARQVRARIDEQFRQTGL CCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPILFHTIVDPLVREEVLKAQASGHDFLNTFVSPLEQELGVKAEPRLHRTHGMENRKLYD CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHH DRIEAVNFALANDDGITTKEYEEADIILIGVSRCGKTPTSLYLALQFGIRAANYPFIEQD HHHHHHHEEEECCCCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCHHHC MGALVLPTALKANRHKLFGLTITPQRLHEIRNQRRANSRYSSLEQCEQELASVERLFRQE CCCEEEHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIRFLDTSSHSVEEISAKILEATGMRRQLY HHHHHCCCCCHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA