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The map label for this gene is dsrC [H]

Identifier: 145299463

GI number: 145299463

Start: 2697165

End: 2697506

Strand: Direct

Name: dsrC [H]

Synonym: ASA_2527

Alternate gene names: 145299463

Gene position: 2697165-2697506 (Clockwise)

Preceding gene: 145299462

Following gene: 145299471

Centisome position: 57.36

GC content: 55.85

Gene sequence:

>342_bases
ATGGCTGAGCATCAGCTGGAATTCAACGGCCAAACCATCGAAACCGATGCCAAGGGCTATCTGCTGAACAGCAGTGACTG
GAGCGAGGAGCTGGCACAGGTGCTGGCCGAGCAGGAAGGCATAGTGATGGAAGAGCCTCACTGGGAGGTGGTGCGTTTCG
TGCGAGCTTTCTATCTGGAGTTCAACACCTCCCCTGCCATCCGCGCTCTGGTCAAGGCGATGGAAAAACAGTACGGCCCG
GAAAAAGGCAACAGCCGCTATCTCTACAAGCTGTTTCCTGAGGGGCCAGCCAAACAGGCCACCAAGATAGGCGGCCTGCC
AAAACCAGTGAAATGCATCTAA

Upstream 100 bases:

>100_bases
AGTTGCTCACCCTGGCCAACGAGAGCCGGTTGCTCACCGGGGGCCAAGGCGCTACCATGCCCGCCCAATCCTGATAGCCC
TATTTGCGAGGAGCCCTCTT

Downstream 100 bases:

>100_bases
AAAAATACCGCGCCCATCTGTGAAATGAAGCGCGGTATTTTTTTATCTCGTTGAACTATCAGGGTTTGTAGGCCACAACG
GATCCACTGAGTCCTGTCAT

Product: dissimilatory sulfite reductase, gamma subunit

Products: NA

Alternate protein names: tRNA 2-thiouridine synthesizing protein E [H]

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAEHQLEFNGQTIETDAKGYLLNSSDWSEELAQVLAEQEGIVMEEPHWEVVRFVRAFYLEFNTSPAIRALVKAMEKQYGP
EKGNSRYLYKLFPEGPAKQATKIGGLPKPVKCI

Sequences:

>Translated_113_residues
MAEHQLEFNGQTIETDAKGYLLNSSDWSEELAQVLAEQEGIVMEEPHWEVVRFVRAFYLEFNTSPAIRALVKAMEKQYGP
EKGNSRYLYKLFPEGPAKQATKIGGLPKPVKCI
>Mature_112_residues
AEHQLEFNGQTIETDAKGYLLNSSDWSEELAQVLAEQEGIVMEEPHWEVVRFVRAFYLEFNTSPAIRALVKAMEKQYGPE
KGNSRYLYKLFPEGPAKQATKIGGLPKPVKCI

Specific function: Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Could accept sulfur from tusD [H]

COG id: COG2920

COG function: function code P; Dissimilatory sulfite reductase (desulfoviridin), gamma subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dsrC/tusE family [H]

Homologues:

Organism=Escherichia coli, GI87081811, Length=108, Percent_Identity=74.0740740740741, Blast_Score=166, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007453 [H]

Pfam domain/function: PF04358 DsrC [H]

EC number: NA

Molecular weight: Translated: 12833; Mature: 12702

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEHQLEFNGQTIETDAKGYLLNSSDWSEELAQVLAEQEGIVMEEPHWEVVRFVRAFYLE
CCCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHH
FNTSPAIRALVKAMEKQYGPEKGNSRYLYKLFPEGPAKQATKIGGLPKPVKCI
CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AEHQLEFNGQTIETDAKGYLLNSSDWSEELAQVLAEQEGIVMEEPHWEVVRFVRAFYLE
CCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHH
FNTSPAIRALVKAMEKQYGPEKGNSRYLYKLFPEGPAKQATKIGGLPKPVKCI
CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA