| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
Click here to switch to the map view.
The map label for this gene is ate [H]
Identifier: 145299394
GI number: 145299394
Start: 2608074
End: 2608790
Strand: Direct
Name: ate [H]
Synonym: ASA_2444
Alternate gene names: 145299394
Gene position: 2608074-2608790 (Clockwise)
Preceding gene: 145299393
Following gene: 145299395
Centisome position: 55.46
GC content: 56.35
Gene sequence:
>717_bases ATGACAGAAGAAGTGATCCTAAAAGTAGGTCTGACCCCCAAGCATCAATGCAGCTATCTGGGCCATGAACAGGAGCAACT GCTGGTATTGATGGACCACAACCTGCTCAATGCCAGCGGCTATGAGCGGTTGCTGACGGCGGGATTTCGGCGCAGCGGAA ATGACATATATCGGCCCCACTGCCCGGCCTGCAGTGCCTGCCAGTCGCTGCGCATTCACAGCGAACGCTTTGTGCCGAGC CGCAGCCAGAAGCGGATCCGGCAGTTGAATCAGGATCTTGAACTGGTACTCAGCTATGACGACAAGCCCGAGTATTACCA GCTCTACGAGCGCTACATTCGCGAGCGTCACCATGACGGCAGCATGTATCCCCCCAGCCGGACCCAATACAAGGGCTTTT TGCATTGCGACTGGATGCCGCCACTTTACCTCGAAATGCGCAAGGACAACCGGCTGATCGGGGTCGCTACCACGGATCTG CTCCCCCACTCCTTGAGCGCCATGTATACCTTTTTCGATCCGGCTCACGCCGATCGCTCCCTCGGTACCTTTGCCATTCT GAGTCAGCTGGATCTGGCCAAGCGCACAGGTCGCACCTGGTTGTATCTTGGCTATCTGGTGGAGGCGTGCCGCAAGATGA ATTACAAGCGCCAATACCTGCCTCACGAGCGGCTGATACAGGGGGAATGGAAAAATATCGACACCAAGCCCGAGTAA
Upstream 100 bases:
>100_bases GGATCCAGGAGTGGCCAAGAGAGACGTTTTTGACGGCGCTGACCAAACTGAGCCGGCAGCCGTTGGCAGATAACTGCTGG CAAGCGGGGAGCATCAGCCT
Downstream 100 bases:
>100_bases ACTTTACACATAGCCTTAAATCCGGCATGATCCAGCGGATTTTTGTTGTGGCTTATCAAGAGGATTCAATGGCTAAAGAA GACAGTATTGAGATGCAGGG
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTEEVILKVGLTPKHQCSYLGHEQEQLLVLMDHNLLNASGYERLLTAGFRRSGNDIYRPHCPACSACQSLRIHSERFVPS RSQKRIRQLNQDLELVLSYDDKPEYYQLYERYIRERHHDGSMYPPSRTQYKGFLHCDWMPPLYLEMRKDNRLIGVATTDL LPHSLSAMYTFFDPAHADRSLGTFAILSQLDLAKRTGRTWLYLGYLVEACRKMNYKRQYLPHERLIQGEWKNIDTKPE
Sequences:
>Translated_238_residues MTEEVILKVGLTPKHQCSYLGHEQEQLLVLMDHNLLNASGYERLLTAGFRRSGNDIYRPHCPACSACQSLRIHSERFVPS RSQKRIRQLNQDLELVLSYDDKPEYYQLYERYIRERHHDGSMYPPSRTQYKGFLHCDWMPPLYLEMRKDNRLIGVATTDL LPHSLSAMYTFFDPAHADRSLGTFAILSQLDLAKRTGRTWLYLGYLVEACRKMNYKRQYLPHERLIQGEWKNIDTKPE >Mature_237_residues TEEVILKVGLTPKHQCSYLGHEQEQLLVLMDHNLLNASGYERLLTAGFRRSGNDIYRPHCPACSACQSLRIHSERFVPSR SQKRIRQLNQDLELVLSYDDKPEYYQLYERYIRERHHDGSMYPPSRTQYKGFLHCDWMPPLYLEMRKDNRLIGVATTDLL PHSLSAMYTFFDPAHADRSLGTFAILSQLDLAKRTGRTWLYLGYLVEACRKMNYKRQYLPHERLIQGEWKNIDTKPE
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321421, Length=247, Percent_Identity=25.5060728744939, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 28056; Mature: 27925
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEVILKVGLTPKHQCSYLGHEQEQLLVLMDHNLLNASGYERLLTAGFRRSGNDIYRPH CCCCEEEEECCCCCHHHHHCCCCCHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC CPACSACQSLRIHSERFVPSRSQKRIRQLNQDLELVLSYDDKPEYYQLYERYIRERHHDG CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC SMYPPSRTQYKGFLHCDWMPPLYLEMRKDNRLIGVATTDLLPHSLSAMYTFFDPAHADRS CCCCCCCCCCCCEEEECCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHCCCHHCCCC LGTFAILSQLDLAKRTGRTWLYLGYLVEACRKMNYKRQYLPHERLIQGEWKNIDTKPE HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure TEEVILKVGLTPKHQCSYLGHEQEQLLVLMDHNLLNASGYERLLTAGFRRSGNDIYRPH CCCEEEEECCCCCHHHHHCCCCCHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC CPACSACQSLRIHSERFVPSRSQKRIRQLNQDLELVLSYDDKPEYYQLYERYIRERHHDG CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC SMYPPSRTQYKGFLHCDWMPPLYLEMRKDNRLIGVATTDLLPHSLSAMYTFFDPAHADRS CCCCCCCCCCCCEEEECCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHCCCHHCCCC LGTFAILSQLDLAKRTGRTWLYLGYLVEACRKMNYKRQYLPHERLIQGEWKNIDTKPE HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA