| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is terC [C]
Identifier: 145299365
GI number: 145299365
Start: 2576045
End: 2576776
Strand: Direct
Name: terC [C]
Synonym: ASA_2414
Alternate gene names: 145299365
Gene position: 2576045-2576776 (Clockwise)
Preceding gene: 145299361
Following gene: 145299377
Centisome position: 54.78
GC content: 59.15
Gene sequence:
>732_bases ATGCTGGAATGGGCTCTTGACCCCTCTGCCTGGGTTGCGCTCGCAACCCTTACCCTGCTCGAAATCGTGCTGGGTATCGA TAACATCATTTTTATCTCCATCCTGGTTGCCCGCCTGCCCGAGGCGCAACGTCAGAAGGCGCGGATCCTGGGATTGGGGC TGGCCATGGGTACCCGTATCCTGCTGCTGCTGTCGCTTGCCTGGGTCATGCGCCTGACCGAGCCGTTGTTCACCGTACTG GGTGAGGCCATCTCGGGTCGCGATCTCATCCTGCTGCTGGGAGGCCTGTTCCTCATCGGCAAGAGTGCCCACGAGATCCA CGCCACCCTGGAAGGCGCCGCCGAGCCGGAGGGCTCCATGGCGGTCGCCTCCGGTTTCGTCAGCACCCTGATCCAGATCG CCATTCTCGATATCGTGTTCAGCCTGGATTCGGTCATCACGGCAGTCGGCATGGCAGATCACGTGCCCGTCATGGTGCTG GCCATCATGATCGCCGTCTTCATCATGATGTTCGCCGCCAAGTCCATCGGGGACTTTGTCGACAACCACCCCACCATCAA GATGCTGGCACTCTCCTTCCTGACTCTGGTTGGTTTCGCGCTGATGGCCGAGGGGATGGATCTGCACATTCCGAAGGGTT ACATCTACTTCGCCATGGCTTTCTCGTTGACGGTGGAGATGATCAACATCCGTCTGCGCAGTCACCACGACATCAAGAAG CTCGAACAGTAA
Upstream 100 bases:
>100_bases CTCTGGTCAGCCGCCATTTTATCTTTTCAAGGCATGGGGACAAGCCATGTTGCGCCTGCTAGAATCCGCTTCCTCTCATT TTGTTAACCAAGGTTCAGTC
Downstream 100 bases:
>100_bases GCGGACGAGCCACAAAAAAGAGCGCCATCAGGCGCTCTTTTTTTATCCACACAACCGGCTTATTCGTTGCTGATGATGAT GCCAACGCGGCGGTTCTCTG
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MLEWALDPSAWVALATLTLLEIVLGIDNIIFISILVARLPEAQRQKARILGLGLAMGTRILLLLSLAWVMRLTEPLFTVL GEAISGRDLILLLGGLFLIGKSAHEIHATLEGAAEPEGSMAVASGFVSTLIQIAILDIVFSLDSVITAVGMADHVPVMVL AIMIAVFIMMFAAKSIGDFVDNHPTIKMLALSFLTLVGFALMAEGMDLHIPKGYIYFAMAFSLTVEMINIRLRSHHDIKK LEQ
Sequences:
>Translated_243_residues MLEWALDPSAWVALATLTLLEIVLGIDNIIFISILVARLPEAQRQKARILGLGLAMGTRILLLLSLAWVMRLTEPLFTVL GEAISGRDLILLLGGLFLIGKSAHEIHATLEGAAEPEGSMAVASGFVSTLIQIAILDIVFSLDSVITAVGMADHVPVMVL AIMIAVFIMMFAAKSIGDFVDNHPTIKMLALSFLTLVGFALMAEGMDLHIPKGYIYFAMAFSLTVEMINIRLRSHHDIKK LEQ >Mature_243_residues MLEWALDPSAWVALATLTLLEIVLGIDNIIFISILVARLPEAQRQKARILGLGLAMGTRILLLLSLAWVMRLTEPLFTVL GEAISGRDLILLLGGLFLIGKSAHEIHATLEGAAEPEGSMAVASGFVSTLIQIAILDIVFSLDSVITAVGMADHVPVMVL AIMIAVFIMMFAAKSIGDFVDNHPTIKMLALSFLTLVGFALMAEGMDLHIPKGYIYFAMAFSLTVEMINIRLRSHHDIKK LEQ
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0053 family [H]
Homologues:
Organism=Escherichia coli, GI1789197, Length=230, Percent_Identity=62.6086956521739, Blast_Score=265, Evalue=2e-72, Organism=Escherichia coli, GI1788119, Length=228, Percent_Identity=50.8771929824561, Blast_Score=229, Evalue=9e-62, Organism=Escherichia coli, GI87082033, Length=228, Percent_Identity=49.1228070175439, Blast_Score=213, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 26406; Mature: 26406
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEWALDPSAWVALATLTLLEIVLGIDNIIFISILVARLPEAQRQKARILGLGLAMGTRI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LLLLSLAWVMRLTEPLFTVLGEAISGRDLILLLGGLFLIGKSAHEIHATLEGAAEPEGSM HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCH AVASGFVSTLIQIAILDIVFSLDSVITAVGMADHVPVMVLAIMIAVFIMMFAAKSIGDFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DNHPTIKMLALSFLTLVGFALMAEGMDLHIPKGYIYFAMAFSLTVEMINIRLRSHHDIKK CCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH LEQ HCC >Mature Secondary Structure MLEWALDPSAWVALATLTLLEIVLGIDNIIFISILVARLPEAQRQKARILGLGLAMGTRI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LLLLSLAWVMRLTEPLFTVLGEAISGRDLILLLGGLFLIGKSAHEIHATLEGAAEPEGSM HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCH AVASGFVSTLIQIAILDIVFSLDSVITAVGMADHVPVMVLAIMIAVFIMMFAAKSIGDFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DNHPTIKMLALSFLTLVGFALMAEGMDLHIPKGYIYFAMAFSLTVEMINIRLRSHHDIKK CCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH LEQ HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]