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The map label for this gene is cdd [H]

Identifier: 145299361

GI number: 145299361

Start: 2571695

End: 2572576

Strand: Direct

Name: cdd [H]

Synonym: ASA_2410

Alternate gene names: 145299361

Gene position: 2571695-2572576 (Clockwise)

Preceding gene: 145299360

Following gene: 145299365

Centisome position: 54.69

GC content: 64.17

Gene sequence:

>882_bases
ATGCATCCCCGTTTTGCCAAGCCACTCGATACCCTGTCCGCCCCGCTCAAAGCGGCGCTGCTGCCCATGCTGGACAACGA
TTTCCAGGCCCGTTTCACGCCACAGCAGGTGGCGACCCTGAAAGCCGCCACAGGGCTGGAAGATCGCGCCCTGCGTCTGG
CGCTGCTGCCACTGGCCGCCGCCTGCTCGGTGGCGCCCATCTCCAAATTTTTTGTCGGCGCCATCGCCTGCGGCCTGAGC
GGTACCTGGTATTTCGGCGCCAACATGGAATTTGCCGGACAAGGGTTGTTCCACTCGGTCCATGCGGAGCAATCCGCCAT
CTCCAACGCCTGGCTGGGCGGTGAGACAGGGATCAGCGAAATCACGGTCAACTACACCCCCTGCGGCCATTGCCGCCAGT
TCATGAACGAGCTGAGCACCGCCAAAACGCTGCAAGTCTCCCTGCCTGACGACTTGAGCGCGCTGCAATCCTTCCTGCCC
CACTCCTTTGGCCCGGCCGATCTCGACATCACCGATGCCCTGATGAGCCCGCAAGCTCATGACGAGCTGGTGCTCGAGAG
CGAGGATCCGATCTGGCGAGCGGCGCTGGCCGCTGCCCGTCAAAGCTACGCCCCCTACAGCCAGGGCTATGCCGCCGTGG
CGCTGCTGTTTGCCGATGGCCGCCTCTTCTGTGGTCGCTACGCAGAAAACGCGGCGTTCAATCCCAGCCTGCCGCCGATG
CAGATGGCCTGCGCCCACGCTGTGCTGTGCGGCGAAGATCTCGCCAGCATCCGTCGCGCCGTGCTGCTGGAGAGCAAAAA
CGGCCAGATCAGCCAGCGGGATTCTGCCCAGTCCACCCTCAAGGCGCTGGGCTCGGTCGAGCTGGAATACCAGGCCGTCT
GA

Upstream 100 bases:

>100_bases
TCCTCCTCCTCCTTTTGCCCGTCAGGGCGTGAGCGCGCTCACACATTTTGCCGAGCTTGCTCCCTACAATGGCCCCCCAA
TTGGCCTTTGAGGACACACT

Downstream 100 bases:

>100_bases
AGTAAATGACGTCCAACAACAAGGGGAGCCATTGGCTCCCCTTGTTGTTGCTGTTGATCGCTGAGTCACGTCAGTCCGTC
AGGATTCCCAGATGATGCTC

Product: cytidine deaminase

Products: NA

Alternate protein names: Cytidine aminohydrolase; CDA [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MHPRFAKPLDTLSAPLKAALLPMLDNDFQARFTPQQVATLKAATGLEDRALRLALLPLAAACSVAPISKFFVGAIACGLS
GTWYFGANMEFAGQGLFHSVHAEQSAISNAWLGGETGISEITVNYTPCGHCRQFMNELSTAKTLQVSLPDDLSALQSFLP
HSFGPADLDITDALMSPQAHDELVLESEDPIWRAALAAARQSYAPYSQGYAAVALLFADGRLFCGRYAENAAFNPSLPPM
QMACAHAVLCGEDLASIRRAVLLESKNGQISQRDSAQSTLKALGSVELEYQAV

Sequences:

>Translated_293_residues
MHPRFAKPLDTLSAPLKAALLPMLDNDFQARFTPQQVATLKAATGLEDRALRLALLPLAAACSVAPISKFFVGAIACGLS
GTWYFGANMEFAGQGLFHSVHAEQSAISNAWLGGETGISEITVNYTPCGHCRQFMNELSTAKTLQVSLPDDLSALQSFLP
HSFGPADLDITDALMSPQAHDELVLESEDPIWRAALAAARQSYAPYSQGYAAVALLFADGRLFCGRYAENAAFNPSLPPM
QMACAHAVLCGEDLASIRRAVLLESKNGQISQRDSAQSTLKALGSVELEYQAV
>Mature_293_residues
MHPRFAKPLDTLSAPLKAALLPMLDNDFQARFTPQQVATLKAATGLEDRALRLALLPLAAACSVAPISKFFVGAIACGLS
GTWYFGANMEFAGQGLFHSVHAEQSAISNAWLGGETGISEITVNYTPCGHCRQFMNELSTAKTLQVSLPDDLSALQSFLP
HSFGPADLDITDALMSPQAHDELVLESEDPIWRAALAAARQSYAPYSQGYAAVALLFADGRLFCGRYAENAAFNPSLPPM
QMACAHAVLCGEDLASIRRAVLLESKNGQISQRDSAQSTLKALGSVELEYQAV

Specific function: This enzyme scavenge exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis [H]

COG id: COG0295

COG function: function code F; Cytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788465, Length=286, Percent_Identity=53.8461538461538, Blast_Score=253, Evalue=9e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR013171
- InterPro:   IPR006263
- InterPro:   IPR016193
- InterPro:   IPR020797 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1; PF08211 dCMP_cyt_deam_2 [H]

EC number: =3.5.4.5 [H]

Molecular weight: Translated: 31363; Mature: 31363

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPRFAKPLDTLSAPLKAALLPMLDNDFQARFTPQQVATLKAATGLEDRALRLALLPLAA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
ACSVAPISKFFVGAIACGLSGTWYFGANMEFAGQGLFHSVHAEQSAISNAWLGGETGISE
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCE
ITVNYTPCGHCRQFMNELSTAKTLQVSLPDDLSALQSFLPHSFGPADLDITDALMSPQAH
EEEECCCCHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCC
DELVLESEDPIWRAALAAARQSYAPYSQGYAAVALLFADGRLFCGRYAENAAFNPSLPPM
CCEEECCCCCHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCEEECHHHCCCCCCCCCCHH
QMACAHAVLCGEDLASIRRAVLLESKNGQISQRDSAQSTLKALGSVELEYQAV
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MHPRFAKPLDTLSAPLKAALLPMLDNDFQARFTPQQVATLKAATGLEDRALRLALLPLAA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
ACSVAPISKFFVGAIACGLSGTWYFGANMEFAGQGLFHSVHAEQSAISNAWLGGETGISE
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCE
ITVNYTPCGHCRQFMNELSTAKTLQVSLPDDLSALQSFLPHSFGPADLDITDALMSPQAH
EEEECCCCHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCC
DELVLESEDPIWRAALAAARQSYAPYSQGYAAVALLFADGRLFCGRYAENAAFNPSLPPM
CCEEECCCCCHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCEEECHHHCCCCCCCCCCHH
QMACAHAVLCGEDLASIRRAVLLESKNGQISQRDSAQSTLKALGSVELEYQAV
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA