| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299356
Identifier: 145299356
GI number: 145299356
Start: 2565626
End: 2566528
Strand: Direct
Name: 145299356
Synonym: ASA_2404
Alternate gene names: NA
Gene position: 2565626-2566528 (Clockwise)
Preceding gene: 145299355
Following gene: 145299357
Centisome position: 54.56
GC content: 52.38
Gene sequence:
>903_bases ATGGAACTCCCCTCTGTGGTCACCTCAATTCTGGCGATTGCCCTGCTCTTTTTGGGTCCATTGTTTTTACTGATTAGCGC CATGACGTTTATCATGAAGAGGTACAAACGGCATCACACCAGCCCTTTGACCCGGGATCTACTCAGACCGGCAGGCCATA CCCTGCAAGAGCAAATTGATGATCAGAGGATCGATCTCTTCGGCCTCATGTTGATGACCCCCTTGATGCTACTCATGGTC GCCCTGCTGGCATTGTTACAAAGCACCCTCAACGGCACTCGGGTATCACTAAACCAGCTAGTCATTTTCGGGGTAATAGC AGCAGGCGCCTTTAGCTACTTCTCCTATCGCACCTATCAGGTCATCCAACGCCTACAGCATCTGAAACTCGGCTATGCCT GTGAGCTGGCCGTCGGTCAAGAGCTCGAATACCTAGTCAGGCCCAAAGATCACCCCTATCGGGTCTATCACGATATTCCG TTCGATGGGTTCAACATCGACCACCTGATCATCTCCCCCAATGGCGTCTTCGTTGTCGAAACCAAGGGACGATCCAAACC AATCAATGACGGTACCAGGCAGTTCAAGGTAAGGGTGGAAAACAATGTGCTGCATTTCCCAAATCATGTAGAAACCGAAC CGCTGGATCAGGTTAGGCGCAGTGTCACCTCGGTGCGTAACTGGCTCAATAGCGCCACGGGTACAGATGTGCCGGTAGGC GGGATCCTGGTGCTACCCGGCTGGTATGTCGAATTGTGTCAGAAGACGACCGCCCCCTATGTCGTCAGTGCAGCCGCACT ACCCAAAGTCTTGCCCCAGTTGAGAGTGGGCACACTGGAACTGGCACATATTCAAGCCATTGCCCATCAGGTGGAGCAAA AAGTAAGAGACATCGCCAAATGA
Upstream 100 bases:
>100_bases ATCCTTCCCTTGCAACCCTCTGTGCAAGCGAAAAAAGAGACTTCCGCATAGAGATTGTTCGGTAATAATTTCGTTGTCTG TCGCATTTCAAGGAGATGGA
Downstream 100 bases:
>100_bases CACTACGAAAGTCTGCCCAATAAACCAGCAGCCAGACGAGCTGCCCTTCGCTCTGCCTGCGCTATGGTTTACCATGCAGG CAATTGTGGTGCAGGGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NERD Domain Protein
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MELPSVVTSILAIALLFLGPLFLLISAMTFIMKRYKRHHTSPLTRDLLRPAGHTLQEQIDDQRIDLFGLMLMTPLMLLMV ALLALLQSTLNGTRVSLNQLVIFGVIAAGAFSYFSYRTYQVIQRLQHLKLGYACELAVGQELEYLVRPKDHPYRVYHDIP FDGFNIDHLIISPNGVFVVETKGRSKPINDGTRQFKVRVENNVLHFPNHVETEPLDQVRRSVTSVRNWLNSATGTDVPVG GILVLPGWYVELCQKTTAPYVVSAAALPKVLPQLRVGTLELAHIQAIAHQVEQKVRDIAK
Sequences:
>Translated_300_residues MELPSVVTSILAIALLFLGPLFLLISAMTFIMKRYKRHHTSPLTRDLLRPAGHTLQEQIDDQRIDLFGLMLMTPLMLLMV ALLALLQSTLNGTRVSLNQLVIFGVIAAGAFSYFSYRTYQVIQRLQHLKLGYACELAVGQELEYLVRPKDHPYRVYHDIP FDGFNIDHLIISPNGVFVVETKGRSKPINDGTRQFKVRVENNVLHFPNHVETEPLDQVRRSVTSVRNWLNSATGTDVPVG GILVLPGWYVELCQKTTAPYVVSAAALPKVLPQLRVGTLELAHIQAIAHQVEQKVRDIAK >Mature_300_residues MELPSVVTSILAIALLFLGPLFLLISAMTFIMKRYKRHHTSPLTRDLLRPAGHTLQEQIDDQRIDLFGLMLMTPLMLLMV ALLALLQSTLNGTRVSLNQLVIFGVIAAGAFSYFSYRTYQVIQRLQHLKLGYACELAVGQELEYLVRPKDHPYRVYHDIP FDGFNIDHLIISPNGVFVVETKGRSKPINDGTRQFKVRVENNVLHFPNHVETEPLDQVRRSVTSVRNWLNSATGTDVPVG GILVLPGWYVELCQKTTAPYVVSAAALPKVLPQLRVGTLELAHIQAIAHQVEQKVRDIAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33723; Mature: 33723
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50965 NERD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPSVVTSILAIALLFLGPLFLLISAMTFIMKRYKRHHTSPLTRDLLRPAGHTLQEQID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHC DQRIDLFGLMLMTPLMLLMVALLALLQSTLNGTRVSLNQLVIFGVIAAGAFSYFSYRTYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VIQRLQHLKLGYACELAVGQELEYLVRPKDHPYRVYHDIPFDGFNIDHLIISPNGVFVVE HHHHHHHHHCCCEEEHHHCCHHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEE TKGRSKPINDGTRQFKVRVENNVLHFPNHVETEPLDQVRRSVTSVRNWLNSATGTDVPVG ECCCCCCCCCCCCEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC GILVLPGWYVELCQKTTAPYVVSAAALPKVLPQLRVGTLELAHIQAIAHQVEQKVRDIAK CEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MELPSVVTSILAIALLFLGPLFLLISAMTFIMKRYKRHHTSPLTRDLLRPAGHTLQEQID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHC DQRIDLFGLMLMTPLMLLMVALLALLQSTLNGTRVSLNQLVIFGVIAAGAFSYFSYRTYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VIQRLQHLKLGYACELAVGQELEYLVRPKDHPYRVYHDIPFDGFNIDHLIISPNGVFVVE HHHHHHHHHCCCEEEHHHCCHHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEE TKGRSKPINDGTRQFKVRVENNVLHFPNHVETEPLDQVRRSVTSVRNWLNSATGTDVPVG ECCCCCCCCCCCCEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC GILVLPGWYVELCQKTTAPYVVSAAALPKVLPQLRVGTLELAHIQAIAHQVEQKVRDIAK CEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA