| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is hisJ [H]
Identifier: 145299355
GI number: 145299355
Start: 2564562
End: 2565338
Strand: Direct
Name: hisJ [H]
Synonym: ASA_2403
Alternate gene names: 145299355
Gene position: 2564562-2565338 (Clockwise)
Preceding gene: 145299354
Following gene: 145299356
Centisome position: 54.54
GC content: 61.65
Gene sequence:
>777_bases ATGACCATGAAACTCAATACCGCAATGATGCTGGTGGCCCTGGCCACCGCCGGCCAGGCCGCCGCCAAACCCCTGGTGAT CGCCACCGACGCCACCTATCCCCCCTTCGAGATGGTCGATAGCAGCGGCAAGCTCGGCGGCTTCGAAGTGGATCTGGCCT ATGCCCTGTGCGCGGCCATGAAGACGGAGTGCGAGGTGATCAACCAGCCCTGGGATGCCCTGCTCCCCGGCCTGCAGGTG CGCAAGTACGACGCCATCATGTCCTCCATGAACATCACGGACGAGCGGCGTCAGAAGGTCGCCTTCAGCCAGGTCTACTA CATGATGCAGAACCGCTTCGTGGGACGCAGCGACAAGGCGGCCGACTTTGCCGACACCCCTGAGTACTTCAAGGGCAAGG TGATAGCGGTGCAGGAAGGGACACCCCAGGACAACTTCATCACCGCCCACTACGGTGACGTGGCCAAGATCAAGCGCTAC GTCAACGCCCAGTCCCCCATGCTGGATCTGCAGTCCAGCCGCGCCGACTACACCTTCGGCAACATGGTGCAGTTGAAGGT CGGCTTCCTCGACAAGGAGATGGGCAAGCAGTTCGCCTTCGTCGGTCCCCAGTTCAACGGCACCCAGGACAAGATCCTGG GAGAAGGGGTGGCGGTGGCCCTGCGCAAAAACGATAACAAGCTCAAGGCCCGCTTCGATGCCGCCATCGAGAGCGTCAAG GCCGACGGCACCTTCGACACCCTGCTCAAGAAGTACCAGCTCGAAGACCTGCTCTGA
Upstream 100 bases:
>100_bases GCTGCCGGCCCTCAGCCATCGCAAGATATCCGTCGGCCCCGCAAGCCGACACAACTCATGACTATCGGCATGACGCCACA GACGCCACAACTGCAAGGGA
Downstream 100 bases:
>100_bases TCCCGACGCCGGGCATCCGTCAGGCCATACCTTGCATGCCAGTCGACACCGACTGGCATTTTTTTACCCGGGTTCTGCCG GCAACGCGGCAAACTGCCCT
Product: ABC-type amino acid transporter, periplasmic binding protein
Products: ADP; phosphate; L-histidine [Cytoplasm] [C]
Alternate protein names: HBP [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTMKLNTAMMLVALATAGQAAAKPLVIATDATYPPFEMVDSSGKLGGFEVDLAYALCAAMKTECEVINQPWDALLPGLQV RKYDAIMSSMNITDERRQKVAFSQVYYMMQNRFVGRSDKAADFADTPEYFKGKVIAVQEGTPQDNFITAHYGDVAKIKRY VNAQSPMLDLQSSRADYTFGNMVQLKVGFLDKEMGKQFAFVGPQFNGTQDKILGEGVAVALRKNDNKLKARFDAAIESVK ADGTFDTLLKKYQLEDLL
Sequences:
>Translated_258_residues MTMKLNTAMMLVALATAGQAAAKPLVIATDATYPPFEMVDSSGKLGGFEVDLAYALCAAMKTECEVINQPWDALLPGLQV RKYDAIMSSMNITDERRQKVAFSQVYYMMQNRFVGRSDKAADFADTPEYFKGKVIAVQEGTPQDNFITAHYGDVAKIKRY VNAQSPMLDLQSSRADYTFGNMVQLKVGFLDKEMGKQFAFVGPQFNGTQDKILGEGVAVALRKNDNKLKARFDAAIESVK ADGTFDTLLKKYQLEDLL >Mature_257_residues TMKLNTAMMLVALATAGQAAAKPLVIATDATYPPFEMVDSSGKLGGFEVDLAYALCAAMKTECEVINQPWDALLPGLQVR KYDAIMSSMNITDERRQKVAFSQVYYMMQNRFVGRSDKAADFADTPEYFKGKVIAVQEGTPQDNFITAHYGDVAKIKRYV NAQSPMLDLQSSRADYTFGNMVQLKVGFLDKEMGKQFAFVGPQFNGTQDKILGEGVAVALRKNDNKLKARFDAAIESVKA DGTFDTLLKKYQLEDLL
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788648, Length=229, Percent_Identity=38.8646288209607, Blast_Score=164, Evalue=5e-42, Organism=Escherichia coli, GI1788649, Length=247, Percent_Identity=35.6275303643725, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1787088, Length=242, Percent_Identity=34.297520661157, Blast_Score=148, Evalue=4e-37, Organism=Escherichia coli, GI1787085, Length=247, Percent_Identity=32.3886639676113, Blast_Score=143, Evalue=9e-36, Organism=Escherichia coli, GI1787031, Length=250, Percent_Identity=25.6, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788228, Length=228, Percent_Identity=26.7543859649123, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: 3400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28553; Mature: 28422
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMKLNTAMMLVALATAGQAAAKPLVIATDATYPPFEMVDSSGKLGGFEVDLAYALCAAM CEEEEHHHHHHHHHHHCCHHHCCCEEEEECCCCCCHHHHCCCCCCCCEEHHHHHHHHHHH KTECEVINQPWDALLPGLQVRKYDAIMSSMNITDERRQKVAFSQVYYMMQNRFVGRSDKA HHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC ADFADTPEYFKGKVIAVQEGTPQDNFITAHYGDVAKIKRYVNAQSPMLDLQSSRADYTFG CCCCCCHHHHCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCCCCEEHHCCCCCCCCC NMVQLKVGFLDKEMGKQFAFVGPQFNGTQDKILGEGVAVALRKNDNKLKARFDAAIESVK CEEEEEECCCCHHHCCEEEEECCCCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHC ADGTFDTLLKKYQLEDLL CCCHHHHHHHHHHHHHCC >Mature Secondary Structure TMKLNTAMMLVALATAGQAAAKPLVIATDATYPPFEMVDSSGKLGGFEVDLAYALCAAM EEEEHHHHHHHHHHHCCHHHCCCEEEEECCCCCCHHHHCCCCCCCCEEHHHHHHHHHHH KTECEVINQPWDALLPGLQVRKYDAIMSSMNITDERRQKVAFSQVYYMMQNRFVGRSDKA HHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC ADFADTPEYFKGKVIAVQEGTPQDNFITAHYGDVAKIKRYVNAQSPMLDLQSSRADYTFG CCCCCCHHHHCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCCCCEEHHCCCCCCCCC NMVQLKVGFLDKEMGKQFAFVGPQFNGTQDKILGEGVAVALRKNDNKLKARFDAAIESVK CEEEEEECCCCHHHCCEEEEECCCCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHC ADGTFDTLLKKYQLEDLL CCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]