Click here to switch to the map view.

The map label for this gene is rpmJ

Identifier: 145299330

GI number: 145299330

Start: 2529856

End: 2529981

Strand: Direct

Name: rpmJ

Synonym: ASA_2375

Alternate gene names: 145299330

Gene position: 2529856-2529981 (Clockwise)

Preceding gene: 145299329

Following gene: 145299338

Centisome position: 53.8

GC content: 58.73

Gene sequence:

>126_bases
ATGAAAGTGCTCTCCTCCCTCAAATCAGCCAAGTCCCGCCACCCGGATTGCCAGATTGTCCGCCGCCGCGGCAAGCTGTT
CGTGATCTGCAAGAGCAATCCCAGATTCAAGGCTCGCCAGCGCTGA

Upstream 100 bases:

>100_bases
CCTTCTATACCGGCAAGCAGAAGCAGATCGGCAAGGAGGGTCAGGTCGCCCGCTTTGGTCAACGTTTCGGCCAATTCTTC
AACAAAGGAAAAGACAAGTC

Downstream 100 bases:

>100_bases
GCAAGTCAATCCCTTCACTGACCCTCCGGTCGAAGGGCAATAGAGAAGACACCGGCTTGAGGCCGGCGTCTTCTTCACCA
TGGGTTTAACGCAGATCAGA

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MKVLSSLKSAKSRHPDCQIVRRRGKLFVICKSNPRFKARQR

Sequences:

>Translated_41_residues
MKVLSSLKSAKSRHPDCQIVRRRGKLFVICKSNPRFKARQR
>Mature_41_residues
MKVLSSLKSAKSRHPDCQIVRRRGKLFVICKSNPRFKARQR

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

Organism=Escherichia coli, GI87081713, Length=40, Percent_Identity=77.5, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL361_AERS4 (A4SNF1)

Other databases:

- EMBL:   CP000644
- RefSeq:   YP_001142171.1
- STRING:   A4SNF1
- GeneID:   4994832
- GenomeReviews:   CP000644_GR
- KEGG:   asa:ASA_2375
- eggNOG:   COG0257
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   ASAL382245:ASA_2375-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4827; Mature: 4827

Theoretical pI: Translated: 12.41; Mature: 12.41

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLSSLKSAKSRHPDCQIVRRRGKLFVICKSNPRFKARQR
CCHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKVLSSLKSAKSRHPDCQIVRRRGKLFVICKSNPRFKARQR
CCHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA