Click here to switch to the map view.

The map label for this gene is rpmE2 [H]

Identifier: 145299329

GI number: 145299329

Start: 2529590

End: 2529859

Strand: Direct

Name: rpmE2 [H]

Synonym: ASA_2374

Alternate gene names: 145299329

Gene position: 2529590-2529859 (Clockwise)

Preceding gene: 145299327

Following gene: 145299330

Centisome position: 53.79

GC content: 53.33

Gene sequence:

>270_bases
ATGCGCCCCAACATTCACCCCGAATACCGTCAGGTCCTGTTTCACGATCTGACCGCCAATACCTATTTTCTGGTGGGTTC
CACCCTCAAGACAGACCGCACCAAGCAGTGGGAGGATGGCAATACCTATCCCTATGTGACGCTGGATGTCTCCAGTGCCT
CTCACCCCTTCTATACCGGCAAGCAGAAGCAGATCGGCAAGGAGGGTCAGGTCGCCCGCTTTGGTCAACGTTTCGGCCAA
TTCTTCAACAAAGGAAAAGACAAGTCATGA

Upstream 100 bases:

>100_bases
GGACTCTCGCTGTCATTCCAAAAAATTGTTGATATTCATTCTCAACAGGAGCATGATTTAATTGTTATAAGATAACATAT
CAATTCATAGAGTGAGTATC

Downstream 100 bases:

>100_bases
AAGTGCTCTCCTCCCTCAAATCAGCCAAGTCCCGCCACCCGGATTGCCAGATTGTCCGCCGCCGCGGCAAGCTGTTCGTG
ATCTGCAAGAGCAATCCCAG

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MRPNIHPEYRQVLFHDLTANTYFLVGSTLKTDRTKQWEDGNTYPYVTLDVSSASHPFYTGKQKQIGKEGQVARFGQRFGQ
FFNKGKDKS

Sequences:

>Translated_89_residues
MRPNIHPEYRQVLFHDLTANTYFLVGSTLKTDRTKQWEDGNTYPYVTLDVSSASHPFYTGKQKQIGKEGQVARFGQRFGQ
FFNKGKDKS
>Mature_89_residues
MRPNIHPEYRQVLFHDLTANTYFLVGSTLKTDRTKQWEDGNTYPYVTLDVSSASHPFYTGKQKQIGKEGQVARFGQRFGQ
FFNKGKDKS

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily [H]

Homologues:

Organism=Escherichia coli, GI2367109, Length=86, Percent_Identity=62.7906976744186, Blast_Score=118, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002150 [H]

Pfam domain/function: PF01197 Ribosomal_L31 [H]

EC number: NA

Molecular weight: Translated: 10306; Mature: 10306

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPNIHPEYRQVLFHDLTANTYFLVGSTLKTDRTKQWEDGNTYPYVTLDVSSASHPFYTG
CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
KQKQIGKEGQVARFGQRFGQFFNKGKDKS
CHHHCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRPNIHPEYRQVLFHDLTANTYFLVGSTLKTDRTKQWEDGNTYPYVTLDVSSASHPFYTG
CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
KQKQIGKEGQVARFGQRFGQFFNKGKDKS
CHHHCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA