| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299326
Identifier: 145299326
GI number: 145299326
Start: 2525562
End: 2527394
Strand: Direct
Name: 145299326
Synonym: ASA_2370
Alternate gene names: NA
Gene position: 2525562-2527394 (Clockwise)
Preceding gene: 145299325
Following gene: 145299327
Centisome position: 53.71
GC content: 61.21
Gene sequence:
>1833_bases GTGAGTCGGCGGGTAAGGGACTCACGTTACCGCTTCTCCTTCCTGTGTCAGAAAAAGTGCCCCTTTCTTGCCAGGAAGCG GCACTTTTGCAAATTATTTCAAGCACATTACCCTCGCCCATTGCATAGCGCAGTCAGGCTCGGCAAGATAGGCCCGCTTT CGAGACTTCCCAGCAGGAACAGGTCACCCATGAATCATGCCATCCGTTTTAGCGCTCCTCGTGTCAATCCGGGCCTAAGG CCGCTAGTCATCCTGCTCACCGGTCTGCTGGCATTGCTGTTTTGTCTGCGCAATCCGCTGTTTCATGGCATGGCCCCCGG TTTCGATGCCTCGTTGTTTGCGGTGATGGGCAAGATGTGGAGCGAGGGGGGCGTGCTCTATCGGGACATGATCGACATCA AGGGCACCATGATCTTCGCCCTCGATGCGCTCGGTTATCATATGGGCGGTTTCTTCGGGATCTGGCTGCTGGAATGGGCG CTCTGCTGGCTCGGTCTGCTGGCCAGCTGGCAGGCATTCGCTCAGCTTGGCCTCTCCCTGCGCGCCCGCCTCGGCACCAT GCTGGCAGTGCTGGCGCTCTACAGCACCCGCTATTACTACGGCAACATGACAGAGGACTGGACATTCCACCTGGCCCTCA TCGCCCAGTGGGCCTTCATCACCATGCTGCTGGACAAACGCTTCAGCTGGGGCCCAGCCCTGGTGGCGGCGCTGACATTT GCCATCGTGGCCTGGATGCGCACCAACAACGGCGCCTTCTGGGGCGCCTGGTATCTGGTACTGTTCTGCCATTGGTGCCT GCGCGAACAGTGGCGTTGCGCCCTCGCCCTGCTCTTTTCCAGCCTGCTGGGTCTGGCCCTGATTGGCGGCCCCCTGTTCG CCTACTTCCAGCACCACAGCCTGCTGGCCGAATTCAAGTATTACGCCTTCGACATCTTCTTCGAGGGCAGCTACGGCACA GGCTTCTCGCCGGATGTGGGCAGCGTCGGCCTGCTGCGCACCCGCCTCATCATGCTGCTGCCCGCCTTCATCGTCCTAAT GATGGGCCGGCGTCAGGAGTGGTATCTGCCCGCCCTGTGCGCCACCCTGTTTGGCGTGATCTTTACCCTGATTGCCAACT CTGTCTCCGGCCATGTGTTTGATCACTACGACGTCCTCTATCTGCCGCTGGCCCTGCTGCCGCTCGCCTGTCTGCTGGAT CGCAGCGAACAGCAGGCCGATGGTCTCGGCCTGCTCTGCATCTCGCTGGTGGTGCTGACTGCCAGCTGGCTGCTGGCCCA GCAGCTCGGTTATGGCTGGAGCACCAAGGAGTGGTCGCTGGAACGAGTACGGGAAGTGCTCGGCAACAGCCTGCTGTGGG CCTTGCCCGTGCTGATCCTGGTGCCCCTGTGGCGCGCCTGGGATGTGCGCAGTGCCACCCCCTGGCTCGCCTCGCTGGCC ATGCTGGCCCTGTTGCTCAACAACGCCTGGGAGGGCAGCCTGAAGGGCAAGCCGTTCAACCCGCCGGCCCAAGTGCGGGT CGACCGGATCAAGGCCGAAACCGGCCCGACCGACAAGATCTGGGTCGATGGCATTCAGCCGCAATACTATCTGTGGACCG ATCGCCAACCCGCGTCGGCCTACCTCTTCTTTGCCAACGTCAATCCGCCCTACGATGTGCGTGAGCGGGTGCTGGCCGAC ATCAAGCGCCAGAGCCCCAAGTTCATCATCGCCAAACCGGAGCGGATTGCAGACGAGCTGAAAAAACCGACCACCCCTTC TAGTCTCGCCTTCTATCAATATCTGGTGAGCCAGTATGAAGAGGTGGATCCGGGTCTCTATCGCAGGCGCTGA
Upstream 100 bases:
>100_bases GCATTACGCTGGCGGATGCCTTCATCCGCTGGGCCCGTTATCTGCCCGAGCTCGCAACCCTGCCGGAGCTGGTGGAGTAT CACGGCCCTCACGCCATGCC
Downstream 100 bases:
>100_bases TCCCGCTCCATCGCCGAAAAGGACCGTCACTGCATGCAGTGACGGTCCTTTTGTTTGGGCGCACGGCACGTTTCGGACAA GCGCAAGCCCTATCCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MSRRVRDSRYRFSFLCQKKCPFLARKRHFCKLFQAHYPRPLHSAVRLGKIGPLSRLPSRNRSPMNHAIRFSAPRVNPGLR PLVILLTGLLALLFCLRNPLFHGMAPGFDASLFAVMGKMWSEGGVLYRDMIDIKGTMIFALDALGYHMGGFFGIWLLEWA LCWLGLLASWQAFAQLGLSLRARLGTMLAVLALYSTRYYYGNMTEDWTFHLALIAQWAFITMLLDKRFSWGPALVAALTF AIVAWMRTNNGAFWGAWYLVLFCHWCLREQWRCALALLFSSLLGLALIGGPLFAYFQHHSLLAEFKYYAFDIFFEGSYGT GFSPDVGSVGLLRTRLIMLLPAFIVLMMGRRQEWYLPALCATLFGVIFTLIANSVSGHVFDHYDVLYLPLALLPLACLLD RSEQQADGLGLLCISLVVLTASWLLAQQLGYGWSTKEWSLERVREVLGNSLLWALPVLILVPLWRAWDVRSATPWLASLA MLALLLNNAWEGSLKGKPFNPPAQVRVDRIKAETGPTDKIWVDGIQPQYYLWTDRQPASAYLFFANVNPPYDVRERVLAD IKRQSPKFIIAKPERIADELKKPTTPSSLAFYQYLVSQYEEVDPGLYRRR
Sequences:
>Translated_610_residues MSRRVRDSRYRFSFLCQKKCPFLARKRHFCKLFQAHYPRPLHSAVRLGKIGPLSRLPSRNRSPMNHAIRFSAPRVNPGLR PLVILLTGLLALLFCLRNPLFHGMAPGFDASLFAVMGKMWSEGGVLYRDMIDIKGTMIFALDALGYHMGGFFGIWLLEWA LCWLGLLASWQAFAQLGLSLRARLGTMLAVLALYSTRYYYGNMTEDWTFHLALIAQWAFITMLLDKRFSWGPALVAALTF AIVAWMRTNNGAFWGAWYLVLFCHWCLREQWRCALALLFSSLLGLALIGGPLFAYFQHHSLLAEFKYYAFDIFFEGSYGT GFSPDVGSVGLLRTRLIMLLPAFIVLMMGRRQEWYLPALCATLFGVIFTLIANSVSGHVFDHYDVLYLPLALLPLACLLD RSEQQADGLGLLCISLVVLTASWLLAQQLGYGWSTKEWSLERVREVLGNSLLWALPVLILVPLWRAWDVRSATPWLASLA MLALLLNNAWEGSLKGKPFNPPAQVRVDRIKAETGPTDKIWVDGIQPQYYLWTDRQPASAYLFFANVNPPYDVRERVLAD IKRQSPKFIIAKPERIADELKKPTTPSSLAFYQYLVSQYEEVDPGLYRRR >Mature_609_residues SRRVRDSRYRFSFLCQKKCPFLARKRHFCKLFQAHYPRPLHSAVRLGKIGPLSRLPSRNRSPMNHAIRFSAPRVNPGLRP LVILLTGLLALLFCLRNPLFHGMAPGFDASLFAVMGKMWSEGGVLYRDMIDIKGTMIFALDALGYHMGGFFGIWLLEWAL CWLGLLASWQAFAQLGLSLRARLGTMLAVLALYSTRYYYGNMTEDWTFHLALIAQWAFITMLLDKRFSWGPALVAALTFA IVAWMRTNNGAFWGAWYLVLFCHWCLREQWRCALALLFSSLLGLALIGGPLFAYFQHHSLLAEFKYYAFDIFFEGSYGTG FSPDVGSVGLLRTRLIMLLPAFIVLMMGRRQEWYLPALCATLFGVIFTLIANSVSGHVFDHYDVLYLPLALLPLACLLDR SEQQADGLGLLCISLVVLTASWLLAQQLGYGWSTKEWSLERVREVLGNSLLWALPVLILVPLWRAWDVRSATPWLASLAM LALLLNNAWEGSLKGKPFNPPAQVRVDRIKAETGPTDKIWVDGIQPQYYLWTDRQPASAYLFFANVNPPYDVRERVLADI KRQSPKFIIAKPERIADELKKPTTPSSLAFYQYLVSQYEEVDPGLYRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69512; Mature: 69380
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRVRDSRYRFSFLCQKKCPFLARKRHFCKLFQAHYPRPLHSAVRLGKIGPLSRLPSRN CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCC RSPMNHAIRFSAPRVNPGLRPLVILLTGLLALLFCLRNPLFHGMAPGFDASLFAVMGKMW CCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHH SEGGVLYRDMIDIKGTMIFALDALGYHMGGFFGIWLLEWALCWLGLLASWQAFAQLGLSL CCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARLGTMLAVLALYSTRYYYGNMTEDWTFHLALIAQWAFITMLLDKRFSWGPALVAALTF HHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AIVAWMRTNNGAFWGAWYLVLFCHWCLREQWRCALALLFSSLLGLALIGGPLFAYFQHHS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAEFKYYAFDIFFEGSYGTGFSPDVGSVGLLRTRLIMLLPAFIVLMMGRRQEWYLPALC HHHHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ATLFGVIFTLIANSVSGHVFDHYDVLYLPLALLPLACLLDRSEQQADGLGLLCISLVVLT HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHH ASWLLAQQLGYGWSTKEWSLERVREVLGNSLLWALPVLILVPLWRAWDVRSATPWLASLA HHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH MLALLLNNAWEGSLKGKPFNPPAQVRVDRIKAETGPTDKIWVDGIQPQYYLWTDRQPASA HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCE YLFFANVNPPYDVRERVLADIKRQSPKFIIAKPERIADELKKPTTPSSLAFYQYLVSQYE EEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHH EVDPGLYRRR HCCCCHHCCC >Mature Secondary Structure SRRVRDSRYRFSFLCQKKCPFLARKRHFCKLFQAHYPRPLHSAVRLGKIGPLSRLPSRN CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCC RSPMNHAIRFSAPRVNPGLRPLVILLTGLLALLFCLRNPLFHGMAPGFDASLFAVMGKMW CCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHH SEGGVLYRDMIDIKGTMIFALDALGYHMGGFFGIWLLEWALCWLGLLASWQAFAQLGLSL CCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARLGTMLAVLALYSTRYYYGNMTEDWTFHLALIAQWAFITMLLDKRFSWGPALVAALTF HHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AIVAWMRTNNGAFWGAWYLVLFCHWCLREQWRCALALLFSSLLGLALIGGPLFAYFQHHS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAEFKYYAFDIFFEGSYGTGFSPDVGSVGLLRTRLIMLLPAFIVLMMGRRQEWYLPALC HHHHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ATLFGVIFTLIANSVSGHVFDHYDVLYLPLALLPLACLLDRSEQQADGLGLLCISLVVLT HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHH ASWLLAQQLGYGWSTKEWSLERVREVLGNSLLWALPVLILVPLWRAWDVRSATPWLASLA HHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH MLALLLNNAWEGSLKGKPFNPPAQVRVDRIKAETGPTDKIWVDGIQPQYYLWTDRQPASA HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCE YLFFANVNPPYDVRERVLADIKRQSPKFIIAKPERIADELKKPTTPSSLAFYQYLVSQYE EEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHH EVDPGLYRRR HCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA