| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is ushA [C]
Identifier: 145299325
GI number: 145299325
Start: 2523904
End: 2525565
Strand: Direct
Name: ushA [C]
Synonym: ASA_2369
Alternate gene names: 145299325
Gene position: 2523904-2525565 (Clockwise)
Preceding gene: 145299324
Following gene: 145299326
Centisome position: 53.67
GC content: 63.36
Gene sequence:
>1662_bases ATGAGTATTACGGTTCAACTTGCCCATTTCAGTGACTGCCACTCCCATTTCGATGGCGCCCCCATGCGCTTCTTCCCTGT TGGCGAGTCAGAATGGCGCACCCCGTGTGGCGGCTATGCCCGCATTCTTACCAGACTCACCGCCCTGCGCCAGCAGGCTG ATGCGGCGGGCCAGACCTGCCTGTTCCTGCACGGTGGCGATACCTTTCAGGGGTCACTCTATTTCAACCGTTTCAAGGGA CGGGCCAATGCCGACTTGCTGAGCCTGTTGCGACCCGATGCCATGGTGATCGGCAATCACGAGTTCGATCTGGGCAACGG TCCTCTGGTGGAATTTTTGCGCCAGCTCGATTTTCCCGTGCTGGCCGCCAACCTCGACAGCAGCCAGGAGCCGGCCGATA CCCCGCTGCGCTTGCAGGGCCTGCCCATGCTTCATGATGCCAGCCGTCCCTGGCACAAACGCGTAATAGACGGCGTCCCC TTTGCGCTGCTTGGCATCACGCTGCCGCAGATGGCCGCCATCGCCAATCCGGATCCCCATACCCGCTTTCATGGTATCGA TGACACCCTGACCGCCGCGATCGGCGAGATCAAGGCTGCGGGCATCCACCACATTATTTTGCTTAGCCACCTGGGACTGG AGCAAGACAAGCGCCTTGCGGCCCGCTTTCCGGAACTGAGCCTCATCATTGGCGGCCACACCCACAGTCAACTGGGGGAT CTCGCGCCCTTGGGGCTCGAGAGCGATGGCAGTTATCCGTTGATGGTGAACGACGTGGCTATCCTCCATGCCGCCCACAG CGCGCTCTGCCTGGGGGTATGCGAGCTGGAGTTTGATGCCCGCGGACGTGTGAGTCGCAGTCAAGGCCAACTGGAATGGT TGCCCTGGCAACCCTGGCCGTTTGCCTCAGAGCCCCCTGCAGGGCTGTACTTCTGCGAGCCGGCCCCCGAGCTCGAGCAG CATCTGGCCAAACGCTACCGGCCCGAGCTCGAGACCATGACCCAGCGCATCGTGACCCATCTCGCCGGGCCGCTCCATCA TCAGCGCCTGCCCGATGCCAATCTGCCCGCCGGCAGCCAGGTTGCTCCGCTGGTGGCCCACGCCATGCTGATCGGTGCCC GCGAACAGGTTGGTCAGGTGGATTTCGCCCTGCACAACGCAGGGGGGGTGCGCTGCTCCCTGGAGCCAGGTCCCTTGAGC GAAGCGGACATCGCAGGTCGCCTGCTCCCGTTTGCCATCCCCCTCACCCTCTACCGGGTGCATGGCCATGAGCTGGCTGA GGCGCTGGAAGGCGCCATCGACAACGCCACCAACAACGGCGTGACGGGCAATGGTAACGGCAGCTTCCCCTACACAGCCG GGATGCGCTTCTGTTATCAGGCTGATCGTCCCAAGGGGGCCAGGATCACCCGTCTGGAGTGGGAAAGCGCGCCAGGCTGC TGGCAGCCAGTCGAGGCAGACGCCATCTATCGGGGAGTATCCAGTGCCTATACCGCCTCCGGCAAAGAGGGCTACACGGC GTTGGCTCGCACCCTGACCCAGCACAATCAGGAGCTCGGCATTACGCTGGCGGATGCCTTCATCCGCTGGGCCCGTTATC TGCCCGAGCTCGCAACCCTGCCGGAGCTGGTGGAGTATCACGGCCCTCACGCCATGCCGTGA
Upstream 100 bases:
>100_bases GGTCCTTCTCTTCCCTTACTAGCCCGGCGTCCTGCCGGGCTAGTATCTTCCCCCTAGGTTGGAGTAGACTCGGTGCTCTT TTTCTCTAAGGAGGACCGAG
Downstream 100 bases:
>100_bases GTCGGCGGGTAAGGGACTCACGTTACCGCTTCTCCTTCCTGTGTCAGAAAAAGTGCCCCTTTCTTGCCAGGAAGCGGCAC TTTTGCAAATTATTTCAAGC
Product: 5'-nucleotidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MSITVQLAHFSDCHSHFDGAPMRFFPVGESEWRTPCGGYARILTRLTALRQQADAAGQTCLFLHGGDTFQGSLYFNRFKG RANADLLSLLRPDAMVIGNHEFDLGNGPLVEFLRQLDFPVLAANLDSSQEPADTPLRLQGLPMLHDASRPWHKRVIDGVP FALLGITLPQMAAIANPDPHTRFHGIDDTLTAAIGEIKAAGIHHIILLSHLGLEQDKRLAARFPELSLIIGGHTHSQLGD LAPLGLESDGSYPLMVNDVAILHAAHSALCLGVCELEFDARGRVSRSQGQLEWLPWQPWPFASEPPAGLYFCEPAPELEQ HLAKRYRPELETMTQRIVTHLAGPLHHQRLPDANLPAGSQVAPLVAHAMLIGAREQVGQVDFALHNAGGVRCSLEPGPLS EADIAGRLLPFAIPLTLYRVHGHELAEALEGAIDNATNNGVTGNGNGSFPYTAGMRFCYQADRPKGARITRLEWESAPGC WQPVEADAIYRGVSSAYTASGKEGYTALARTLTQHNQELGITLADAFIRWARYLPELATLPELVEYHGPHAMP
Sequences:
>Translated_553_residues MSITVQLAHFSDCHSHFDGAPMRFFPVGESEWRTPCGGYARILTRLTALRQQADAAGQTCLFLHGGDTFQGSLYFNRFKG RANADLLSLLRPDAMVIGNHEFDLGNGPLVEFLRQLDFPVLAANLDSSQEPADTPLRLQGLPMLHDASRPWHKRVIDGVP FALLGITLPQMAAIANPDPHTRFHGIDDTLTAAIGEIKAAGIHHIILLSHLGLEQDKRLAARFPELSLIIGGHTHSQLGD LAPLGLESDGSYPLMVNDVAILHAAHSALCLGVCELEFDARGRVSRSQGQLEWLPWQPWPFASEPPAGLYFCEPAPELEQ HLAKRYRPELETMTQRIVTHLAGPLHHQRLPDANLPAGSQVAPLVAHAMLIGAREQVGQVDFALHNAGGVRCSLEPGPLS EADIAGRLLPFAIPLTLYRVHGHELAEALEGAIDNATNNGVTGNGNGSFPYTAGMRFCYQADRPKGARITRLEWESAPGC WQPVEADAIYRGVSSAYTASGKEGYTALARTLTQHNQELGITLADAFIRWARYLPELATLPELVEYHGPHAMP >Mature_552_residues SITVQLAHFSDCHSHFDGAPMRFFPVGESEWRTPCGGYARILTRLTALRQQADAAGQTCLFLHGGDTFQGSLYFNRFKGR ANADLLSLLRPDAMVIGNHEFDLGNGPLVEFLRQLDFPVLAANLDSSQEPADTPLRLQGLPMLHDASRPWHKRVIDGVPF ALLGITLPQMAAIANPDPHTRFHGIDDTLTAAIGEIKAAGIHHIILLSHLGLEQDKRLAARFPELSLIIGGHTHSQLGDL APLGLESDGSYPLMVNDVAILHAAHSALCLGVCELEFDARGRVSRSQGQLEWLPWQPWPFASEPPAGLYFCEPAPELEQH LAKRYRPELETMTQRIVTHLAGPLHHQRLPDANLPAGSQVAPLVAHAMLIGAREQVGQVDFALHNAGGVRCSLEPGPLSE ADIAGRLLPFAIPLTLYRVHGHELAEALEGAIDNATNNGVTGNGNGSFPYTAGMRFCYQADRPKGARITRLEWESAPGCW QPVEADAIYRGVSSAYTASGKEGYTALARTLTQHNQELGITLADAFIRWARYLPELATLPELVEYHGPHAMP
Specific function: Degradation Of External Udp-Glucose To Uridine Monophosphate And Glucose-1-Phosphate, Which Can Then Be Used By The Cell. [C]
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family [H]
Homologues:
Organism=Homo sapiens, GI4505467, Length=558, Percent_Identity=24.3727598566308, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI19922446, Length=530, Percent_Identity=27.9245283018868, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24654424, Length=530, Percent_Identity=27.9245283018868, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24641187, Length=551, Percent_Identity=27.4047186932849, Blast_Score=158, Evalue=9e-39, Organism=Drosophila melanogaster, GI28573524, Length=531, Percent_Identity=25.9887005649718, Blast_Score=155, Evalue=9e-38, Organism=Drosophila melanogaster, GI19922444, Length=532, Percent_Identity=25, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI221329836, Length=528, Percent_Identity=25, Blast_Score=123, Evalue=3e-28,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR004843 - InterPro: IPR006420 [H]
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 60322; Mature: 60191
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00786 5_NUCLEOTIDASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITVQLAHFSDCHSHFDGAPMRFFPVGESEWRTPCGGYARILTRLTALRQQADAAGQTC CEEEEEECCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE LFLHGGDTFQGSLYFNRFKGRANADLLSLLRPDAMVIGNHEFDLGNGPLVEFLRQLDFPV EEEECCCCEECCEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHCCCCE LAANLDSSQEPADTPLRLQGLPMLHDASRPWHKRVIDGVPFALLGITLPQMAAIANPDPH EEECCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC TRFHGIDDTLTAAIGEIKAAGIHHIILLSHLGLEQDKRLAARFPELSLIIGGHTHSQLGD CEECCCCHHHHHHHHHHHHCCHHHEEHHHHCCCCHHHHHHHCCCCEEEEECCCCHHHHHC LAPLGLESDGSYPLMVNDVAILHAAHSALCLGVCELEFDARGRVSRSQGQLEWLPWQPWP CCCCCCCCCCCCCEEECCHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCEEEECCCCCC FASEPPAGLYFCEPAPELEQHLAKRYRPELETMTQRIVTHLAGPLHHQRLPDANLPAGSQ CCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCC VAPLVAHAMLIGAREQVGQVDFALHNAGGVRCSLEPGPLSEADIAGRLLPFAIPLTLYRV HHHHHHHHHHHHCHHHHCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHEEH HGHELAEALEGAIDNATNNGVTGNGNGSFPYTAGMRFCYQADRPKGARITRLEWESAPGC HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCEEEEEECCCCCCC WQPVEADAIYRGVSSAYTASGKEGYTALARTLTQHNQELGITLADAFIRWARYLPELATL CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHH PELVEYHGPHAMP HHHHHHCCCCCCC >Mature Secondary Structure SITVQLAHFSDCHSHFDGAPMRFFPVGESEWRTPCGGYARILTRLTALRQQADAAGQTC EEEEEECCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE LFLHGGDTFQGSLYFNRFKGRANADLLSLLRPDAMVIGNHEFDLGNGPLVEFLRQLDFPV EEEECCCCEECCEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHCCCCE LAANLDSSQEPADTPLRLQGLPMLHDASRPWHKRVIDGVPFALLGITLPQMAAIANPDPH EEECCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC TRFHGIDDTLTAAIGEIKAAGIHHIILLSHLGLEQDKRLAARFPELSLIIGGHTHSQLGD CEECCCCHHHHHHHHHHHHCCHHHEEHHHHCCCCHHHHHHHCCCCEEEEECCCCHHHHHC LAPLGLESDGSYPLMVNDVAILHAAHSALCLGVCELEFDARGRVSRSQGQLEWLPWQPWP CCCCCCCCCCCCCEEECCHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCEEEECCCCCC FASEPPAGLYFCEPAPELEQHLAKRYRPELETMTQRIVTHLAGPLHHQRLPDANLPAGSQ CCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCC VAPLVAHAMLIGAREQVGQVDFALHNAGGVRCSLEPGPLSEADIAGRLLPFAIPLTLYRV HHHHHHHHHHHHCHHHHCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHEEH HGHELAEALEGAIDNATNNGVTGNGNGSFPYTAGMRFCYQADRPKGARITRLEWESAPGC HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCEEEEEECCCCCCC WQPVEADAIYRGVSSAYTASGKEGYTALARTLTQHNQELGITLADAFIRWARYLPELATL CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHH PELVEYHGPHAMP HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]