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The map label for this gene is ycaO [H]

Identifier: 145299306

GI number: 145299306

Start: 2499275

End: 2501035

Strand: Direct

Name: ycaO [H]

Synonym: ASA_2350

Alternate gene names: 145299306

Gene position: 2499275-2501035 (Clockwise)

Preceding gene: 145299303

Following gene: 145299307

Centisome position: 53.15

GC content: 61.27

Gene sequence:

>1761_bases
ATGACCGACCACACTTTTATTCCCGGCAAGGACGCGGCACTGGAAGACTCCATCGACCGTTTCCAGACCAAGCTGCAAGC
CCTGGGGTTTGATATTGAAGAGGCCTCCTGGCTCAACCCTGTGCCCAACGTCTGGTCCGTGCACATCCGGGACAAGGAGT
GCGCCCTCTGTTTCACCAACGGCAAGGGTGCCAGCAAGAAGGCGGCTCTCGCCTCCGCCCTTGGCGAATATTTCGAACGC
CTCTCCACCAACTACTTCTTCGCCGACTTCTATCTGGGCGAGCAGGTGGCGAACTGTGATTTCGTACACTACCCGAACGA
GAAGTGGTTCCCCATCGAGGGTGACCAGTTCCCGGCCGGTCTGCTCGACCCCTTCACCCGCAAGTTCTACAACCCGGACG
GTGAAGTCACAGCCGACATGCTGGTGGATTTGCAGTCGAACAACGAAGAACGCGGCATCGTCGCCCTGCCCTTCGAGCGT
CAGTCTGACCACGAGACCGTCTATATCCCGATGAACATCATCGGCAACCTCTATGTCTCCAACGGCATGAGCGCCGGCAA
CACCCGCACCGAGGCGCGCACTCAGGCACTCTCTGAAGTGTTCGAGCGCCACGTGAAGAACAAGATCATCGCCGAGGCCC
TGAGCCTGCCACTGATCCCGGACGAGGTGATTGCCCGTTATCCGGGGATCGCTGCCTCCATCGCCGCGCTCGAAGCCGAA
GGTTTCCCCATTTACAGCTTCGATGCCTCCCTGGGCGGCCGTTATCCGGTCATCTGCGTGGTGCTGCTCAACCCGAGCAA
CGGCACCTGCTTTGCCTCCTTCGGCGCCCACCCGCGCTTCGAAGTGGCTTTCGAGCGTACCGTCACCGAGCTGCTGCAAG
GCCGTGGCTTGAAGGATCTGGACGTGTTCGTGCCGCCGTCATTCGACAATGAGCAGGTGGCTGATCACCATAATCTGGAA
ACCCACTTCATCGACTCATCAGGCCTCATCAGCTGGGATCTGTTCAAGCAGGATACGGACTTCGAGTTCGCTGACTGGGA
TTTCCGCGGTACCTCCCAGGAGGAGTTCGACCACCTGATCGGCATCTTCCACGAGCTGGAGCAGCCGGTCTACATCGCCG
ACTATGAGCATCTGGGCGTCTACGCCTGCCGCATCCTGGTGCCGGGTATGTCCGACATCTACCCGGCCGAAGACTTGCTG
CTGGCCAACAACAACATGGGGGCCAACCTGCGGGAAGTGATCCTGGCGCTGCCGTCCCTGGAGTGGGATGCCGAGCAGTA
CATGGCGTTGTTCGATCAACTGGACGAAGAGGGACATGACGAGCGTACCCGGGTGCGCGAGCTGCTCGGCATCGCCGCCG
CCAAGGCCACAGCCCTGCACACCCTGCGGGTGGGCGAGCTCAAAGCCATGCTGGCGCTGGCCGCCGGTGAGCTGGAGACG
GCGCTGGATCTCATCGACTGGACCATGGAGTTCAACCAGTCCGTGTTCCCGGCTGATCGCGCCAACTATTACCGTGCGCT
GCGCGCCTGTGTCGAGCTGTTCATCGACGAGGAGCGTGATCCTGAGCAGTACCGCGCCGTCTTTACCCGCATGTACGGGG
AAGAGACCCTGGCCCATGCCTGGGCCAACGCCCGCGGTGAAGCCCGCTTCCACGGACTGGAGGCGGCGGATCTGTCGCTC
GCCCAGTTCCCGCTGCACCAGAAGCTGCTGGCCGCTTACGAGAAACTGCAAAAAGCCAAACGAGCCCATAGCTGGGCCTG
A

Upstream 100 bases:

>100_bases
GGGGCTCCCGGGTGCCAATCCTGTTTTTTGCCTGCCAAACGGGCTGACCCCTGCTATTATCTGCGGCCAAACATGAGCCA
ATAAAAATCAGGATATTGTG

Downstream 100 bases:

>100_bases
TGTGATAGTCTGTTGAAGGGGCCTTGATGGCCCCTTCTGTTATATGGTGCCCTGGCGAGTGGTTTGTTATTCAAAGATGA
AATAAAAAACAAAAAATACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MTDHTFIPGKDAALEDSIDRFQTKLQALGFDIEEASWLNPVPNVWSVHIRDKECALCFTNGKGASKKAALASALGEYFER
LSTNYFFADFYLGEQVANCDFVHYPNEKWFPIEGDQFPAGLLDPFTRKFYNPDGEVTADMLVDLQSNNEERGIVALPFER
QSDHETVYIPMNIIGNLYVSNGMSAGNTRTEARTQALSEVFERHVKNKIIAEALSLPLIPDEVIARYPGIAASIAALEAE
GFPIYSFDASLGGRYPVICVVLLNPSNGTCFASFGAHPRFEVAFERTVTELLQGRGLKDLDVFVPPSFDNEQVADHHNLE
THFIDSSGLISWDLFKQDTDFEFADWDFRGTSQEEFDHLIGIFHELEQPVYIADYEHLGVYACRILVPGMSDIYPAEDLL
LANNNMGANLREVILALPSLEWDAEQYMALFDQLDEEGHDERTRVRELLGIAAAKATALHTLRVGELKAMLALAAGELET
ALDLIDWTMEFNQSVFPADRANYYRALRACVELFIDEERDPEQYRAVFTRMYGEETLAHAWANARGEARFHGLEAADLSL
AQFPLHQKLLAAYEKLQKAKRAHSWA

Sequences:

>Translated_586_residues
MTDHTFIPGKDAALEDSIDRFQTKLQALGFDIEEASWLNPVPNVWSVHIRDKECALCFTNGKGASKKAALASALGEYFER
LSTNYFFADFYLGEQVANCDFVHYPNEKWFPIEGDQFPAGLLDPFTRKFYNPDGEVTADMLVDLQSNNEERGIVALPFER
QSDHETVYIPMNIIGNLYVSNGMSAGNTRTEARTQALSEVFERHVKNKIIAEALSLPLIPDEVIARYPGIAASIAALEAE
GFPIYSFDASLGGRYPVICVVLLNPSNGTCFASFGAHPRFEVAFERTVTELLQGRGLKDLDVFVPPSFDNEQVADHHNLE
THFIDSSGLISWDLFKQDTDFEFADWDFRGTSQEEFDHLIGIFHELEQPVYIADYEHLGVYACRILVPGMSDIYPAEDLL
LANNNMGANLREVILALPSLEWDAEQYMALFDQLDEEGHDERTRVRELLGIAAAKATALHTLRVGELKAMLALAAGELET
ALDLIDWTMEFNQSVFPADRANYYRALRACVELFIDEERDPEQYRAVFTRMYGEETLAHAWANARGEARFHGLEAADLSL
AQFPLHQKLLAAYEKLQKAKRAHSWA
>Mature_585_residues
TDHTFIPGKDAALEDSIDRFQTKLQALGFDIEEASWLNPVPNVWSVHIRDKECALCFTNGKGASKKAALASALGEYFERL
STNYFFADFYLGEQVANCDFVHYPNEKWFPIEGDQFPAGLLDPFTRKFYNPDGEVTADMLVDLQSNNEERGIVALPFERQ
SDHETVYIPMNIIGNLYVSNGMSAGNTRTEARTQALSEVFERHVKNKIIAEALSLPLIPDEVIARYPGIAASIAALEAEG
FPIYSFDASLGGRYPVICVVLLNPSNGTCFASFGAHPRFEVAFERTVTELLQGRGLKDLDVFVPPSFDNEQVADHHNLET
HFIDSSGLISWDLFKQDTDFEFADWDFRGTSQEEFDHLIGIFHELEQPVYIADYEHLGVYACRILVPGMSDIYPAEDLLL
ANNNMGANLREVILALPSLEWDAEQYMALFDQLDEEGHDERTRVRELLGIAAAKATALHTLRVGELKAMLALAAGELETA
LDLIDWTMEFNQSVFPADRANYYRALRACVELFIDEERDPEQYRAVFTRMYGEETLAHAWANARGEARFHGLEAADLSLA
QFPLHQKLLAAYEKLQKAKRAHSWA

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=584, Percent_Identity=70.7191780821918, Blast_Score=849, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 65980; Mature: 65848

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHTFIPGKDAALEDSIDRFQTKLQALGFDIEEASWLNPVPNVWSVHIRDKECALCFTN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEC
GKGASKKAALASALGEYFERLSTNYFFADFYLGEQVANCDFVHYPNEKWFPIEGDQFPAG
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCCCEEECCCCCEECCCCCCCCCH
LLDPFTRKFYNPDGEVTADMLVDLQSNNEERGIVALPFERQSDHETVYIPMNIIGNLYVS
HHCHHHHHHCCCCCCEEEEHEEEECCCCCCCCEEEECCCCCCCCCEEEEEHHHHCCCCEE
NGMSAGNTRTEARTQALSEVFERHVKNKIIAEALSLPLIPDEVIARYPGIAASIAALEAE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHEECC
GFPIYSFDASLGGRYPVICVVLLNPSNGTCFASFGAHPRFEVAFERTVTELLQGRGLKDL
CCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCEEHHHHHHHHHHHHCCCCCCC
DVFVPPSFDNEQVADHHNLETHFIDSSGLISWDLFKQDTDFEFADWDFRGTSQEEFDHLI
EEEECCCCCCCCHHHCCCCEEEEECCCCCEEEEEECCCCCCCEECCCCCCCCHHHHHHHH
GIFHELEQPVYIADYEHLGVYACRILVPGMSDIYPAEDLLLANNNMGANLREVILALPSL
HHHHHHCCCEEEECCHHHHHEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCC
EWDAEQYMALFDQLDEEGHDERTRVRELLGIAAAKATALHTLRVGELKAMLALAAGELET
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALDLIDWTMEFNQSVFPADRANYYRALRACVELFIDEERDPEQYRAVFTRMYGEETLAHA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
WANARGEARFHGLEAADLSLAQFPLHQKLLAAYEKLQKAKRAHSWA
HHCCCCCCCCCCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDHTFIPGKDAALEDSIDRFQTKLQALGFDIEEASWLNPVPNVWSVHIRDKECALCFTN
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEC
GKGASKKAALASALGEYFERLSTNYFFADFYLGEQVANCDFVHYPNEKWFPIEGDQFPAG
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCCCEEECCCCCEECCCCCCCCCH
LLDPFTRKFYNPDGEVTADMLVDLQSNNEERGIVALPFERQSDHETVYIPMNIIGNLYVS
HHCHHHHHHCCCCCCEEEEHEEEECCCCCCCCEEEECCCCCCCCCEEEEEHHHHCCCCEE
NGMSAGNTRTEARTQALSEVFERHVKNKIIAEALSLPLIPDEVIARYPGIAASIAALEAE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHEECC
GFPIYSFDASLGGRYPVICVVLLNPSNGTCFASFGAHPRFEVAFERTVTELLQGRGLKDL
CCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCEEHHHHHHHHHHHHCCCCCCC
DVFVPPSFDNEQVADHHNLETHFIDSSGLISWDLFKQDTDFEFADWDFRGTSQEEFDHLI
EEEECCCCCCCCHHHCCCCEEEEECCCCCEEEEEECCCCCCCEECCCCCCCCHHHHHHHH
GIFHELEQPVYIADYEHLGVYACRILVPGMSDIYPAEDLLLANNNMGANLREVILALPSL
HHHHHHCCCEEEECCHHHHHEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCC
EWDAEQYMALFDQLDEEGHDERTRVRELLGIAAAKATALHTLRVGELKAMLALAAGELET
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALDLIDWTMEFNQSVFPADRANYYRALRACVELFIDEERDPEQYRAVFTRMYGEETLAHA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
WANARGEARFHGLEAADLSLAQFPLHQKLLAAYEKLQKAKRAHSWA
HHCCCCCCCCCCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]