| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
Click here to switch to the map view.
The map label for this gene is nrfG [H]
Identifier: 145299283
GI number: 145299283
Start: 2467991
End: 2469181
Strand: Direct
Name: nrfG [H]
Synonym: ASA_2327
Alternate gene names: 145299283
Gene position: 2467991-2469181 (Clockwise)
Preceding gene: 145299282
Following gene: 145299284
Centisome position: 52.48
GC content: 64.9
Gene sequence:
>1191_bases ATGAAGACCCCTGTCATCCTCTGCCCCCTGCTGCTTGTACTCGGTATGAGCGTGGGCGCCCTGGCCAGCGGGGTCGATAC CTATCAGTTCCAGCACCCGGAGCGACAGCGCCGCGCCCAGGATCTCGCCCGCGCCCTGCGCTGCCCCCAATGCCAGAACC AGAACCTGGTGGAGTCCAACTCCCCCATCGCCCGGGATCTGCGGCTCGAGGTCTACCGCTGGGTGGACGAGGGGCAAAGC GACGAGCAGGTGATCGCCCGCATGACCAGTCGATTTGGCGACTTCGTGCGCTACGATCCCCCCTTCAAGGCCAGCACCCT GCTGCTCTGGGCTGGTCCCCTCCTGTTGCTGGGACTGGCGCTGACCACTCTGGGACGCCGTCTGAAGGCCAAAGGGGATC AGGCCGTCCGGCTCAACGGCTCTGTCAGCAGGCAAGCGGCCAACCCGCGCAGTGAGTTGAATCGCCTGATCATGCTCAGG GAGCAGACCTGTCTCCCCCCAGAACATCCCCTCTATCAGGAGCTGACCGCAGCCAATCTTGACAATGCCACGCCGGCAGC GGAGCTGGCCCTGCGCGAGCGGCTGACCCATCGATCTGGCAACTGCGGCAGCCACACGCAGCACAAGGGCGTCCTTCTGC TGCTCGGAATCGTGATGGTCGGCGGGCTCGCCGCCTTTTATGCCGGCAGCGGCCGCTACCAGGCATGGCAGGCTTATCAG TCACGCCCCGATCCGCTGGCGGGGCTGAGTCCGCGGGATCTGCAGGACAAGGAGCTAGGGGATCTGCATCAAACCCTGCT GCTCAACCCGCAAGACCTCGACAGCTGGGCGGCACTGGGGCAGCTCTATCTCTATCGGGATGAATACGACAACGCCTGGC TTGCCTATCAGCGCCTCGCCCTGCTTGAAGGGGGCGCCAGTGCCGCCACCCTGGCTGCCCAGGCGACTGTGCGCTACTAC CAGGCAGGCCAGCAGATCACCCCAGAGGCGCGCCACTTGCTCGATAGCGCCCTCAAGCAGGATAAAGGGGAAGTGAGCGC CCTGATGCTGCTCGCCTCCGATCACTTCCTGCACGGCCGCTACCGCCAGGCCATCGACCTGTGGCAACAACTGCTGGATA GCGAGCGCCCTCGTATCAGCCGTGCGGCGCTGATTGAGGCGATCCAGACGGCAAAAATGATGGGGGGCTGA
Upstream 100 bases:
>100_bases TGACCACGGATATCTGGCAGCGCCAGTTTGTGCCAAAGCTCAAGGCCGCCCGCGCCACGACCCTGACATCCTCAACGACC ACCGGGCAGGAGGGCAAACC
Downstream 100 bases:
>100_bases CGGGTTGGAGGAGCCATCCTTCACCCTGTTGTCCAGGCCAATATCAACAGGAAATGGCTTGCCATCACGCCAATCCAGGA CAAACAATACGAGCCCTTTA
Product: formate-dependent nitrite reductase complex nrfG subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKTPVILCPLLLVLGMSVGALASGVDTYQFQHPERQRRAQDLARALRCPQCQNQNLVESNSPIARDLRLEVYRWVDEGQS DEQVIARMTSRFGDFVRYDPPFKASTLLLWAGPLLLLGLALTTLGRRLKAKGDQAVRLNGSVSRQAANPRSELNRLIMLR EQTCLPPEHPLYQELTAANLDNATPAAELALRERLTHRSGNCGSHTQHKGVLLLLGIVMVGGLAAFYAGSGRYQAWQAYQ SRPDPLAGLSPRDLQDKELGDLHQTLLLNPQDLDSWAALGQLYLYRDEYDNAWLAYQRLALLEGGASAATLAAQATVRYY QAGQQITPEARHLLDSALKQDKGEVSALMLLASDHFLHGRYRQAIDLWQQLLDSERPRISRAALIEAIQTAKMMGG
Sequences:
>Translated_396_residues MKTPVILCPLLLVLGMSVGALASGVDTYQFQHPERQRRAQDLARALRCPQCQNQNLVESNSPIARDLRLEVYRWVDEGQS DEQVIARMTSRFGDFVRYDPPFKASTLLLWAGPLLLLGLALTTLGRRLKAKGDQAVRLNGSVSRQAANPRSELNRLIMLR EQTCLPPEHPLYQELTAANLDNATPAAELALRERLTHRSGNCGSHTQHKGVLLLLGIVMVGGLAAFYAGSGRYQAWQAYQ SRPDPLAGLSPRDLQDKELGDLHQTLLLNPQDLDSWAALGQLYLYRDEYDNAWLAYQRLALLEGGASAATLAAQATVRYY QAGQQITPEARHLLDSALKQDKGEVSALMLLASDHFLHGRYRQAIDLWQQLLDSERPRISRAALIEAIQTAKMMGG >Mature_396_residues MKTPVILCPLLLVLGMSVGALASGVDTYQFQHPERQRRAQDLARALRCPQCQNQNLVESNSPIARDLRLEVYRWVDEGQS DEQVIARMTSRFGDFVRYDPPFKASTLLLWAGPLLLLGLALTTLGRRLKAKGDQAVRLNGSVSRQAANPRSELNRLIMLR EQTCLPPEHPLYQELTAANLDNATPAAELALRERLTHRSGNCGSHTQHKGVLLLLGIVMVGGLAAFYAGSGRYQAWQAYQ SRPDPLAGLSPRDLQDKELGDLHQTLLLNPQDLDSWAALGQLYLYRDEYDNAWLAYQRLALLEGGASAATLAAQATVRYY QAGQQITPEARHLLDSALKQDKGEVSALMLLASDHFLHGRYRQAIDLWQQLLDSERPRISRAALIEAIQTAKMMGG
Specific function: Possible subunit of a heme lyase [H]
COG id: COG3088
COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats [H]
Homologues:
Organism=Escherichia coli, GI1790513, Length=185, Percent_Identity=42.1621621621622, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1790512, Length=87, Percent_Identity=52.8735632183908, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI1788522, Length=109, Percent_Identity=41.2844036697248, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005616 - InterPro: IPR017565 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF03918 CcmH [H]
EC number: NA
Molecular weight: Translated: 43997; Mature: 43997
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50293 TPR_REGION ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPVILCPLLLVLGMSVGALASGVDTYQFQHPERQRRAQDLARALRCPQCQNQNLVESN CCCCHHHHHHHHHHHCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC SPIARDLRLEVYRWVDEGQSDEQVIARMTSRFGDFVRYDPPFKASTLLLWAGPLLLLGLA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LTTLGRRLKAKGDQAVRLNGSVSRQAANPRSELNRLIMLREQTCLPPEHPLYQELTAANL HHHHHHHHHCCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC DNATPAAELALRERLTHRSGNCGSHTQHKGVLLLLGIVMVGGLAAFYAGSGRYQAWQAYQ CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SRPDPLAGLSPRDLQDKELGDLHQTLLLNPQDLDSWAALGQLYLYRDEYDNAWLAYQRLA CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHH LLEGGASAATLAAQATVRYYQAGQQITPEARHLLDSALKQDKGEVSALMLLASDHFLHGR HHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH YRQAIDLWQQLLDSERPRISRAALIEAIQTAKMMGG HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTPVILCPLLLVLGMSVGALASGVDTYQFQHPERQRRAQDLARALRCPQCQNQNLVESN CCCCHHHHHHHHHHHCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC SPIARDLRLEVYRWVDEGQSDEQVIARMTSRFGDFVRYDPPFKASTLLLWAGPLLLLGLA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LTTLGRRLKAKGDQAVRLNGSVSRQAANPRSELNRLIMLREQTCLPPEHPLYQELTAANL HHHHHHHHHCCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC DNATPAAELALRERLTHRSGNCGSHTQHKGVLLLLGIVMVGGLAAFYAGSGRYQAWQAYQ CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SRPDPLAGLSPRDLQDKELGDLHQTLLLNPQDLDSWAALGQLYLYRDEYDNAWLAYQRLA CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHH LLEGGASAATLAAQATVRYYQAGQQITPEARHLLDSALKQDKGEVSALMLLASDHFLHGR HHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH YRQAIDLWQQLLDSERPRISRAALIEAIQTAKMMGG HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]