Click here to switch to the map view.

The map label for this gene is yfbS [C]

Identifier: 145299245

GI number: 145299245

Start: 2416017

End: 2417087

Strand: Direct

Name: yfbS [C]

Synonym: ASA_2288

Alternate gene names: 145299245

Gene position: 2416017-2417087 (Clockwise)

Preceding gene: 145299244

Following gene: 145299248

Centisome position: 51.38

GC content: 58.26

Gene sequence:

>1071_bases
ATGCACACATCGGCTGTACCCTCTACTACCCCATCTCGCTGGCTGGACATCAAATCCGGGATTGTCATCCTGGATGTGCT
GTTGCTCTGTGCCATGCTGGCCTGGCTGCCGTTTGATCCCATGGTCAACAAAGGGCTGGGGATCCTGGTCTTCATCGCCA
TTCTCTGGCTTACCGAAGCCCTGCACGTCACCATCACGGCCCTGCTGGTACCTCTGCTGGCCACAGTGCTCGGGGTGCTT
GACATGAGCAAATCCCTCACCGATTTTGCCAATCCTATTCTGTTCCTGTTTTTTGGTGGTTTCGCCCTCGCAGCCGCCCT
CTCCAAACAGGGATTGGATACCCTGATGGCGGGCAAGGTGATGCACCTGGCCAACGGTCATCTGGGCTGGGGGATAATAT
TGCTGTTTACCATCACGGCGGCCATGTCCATGTGGATCAGCAATACCGCCACCACCGCCATGATGCTGCCACTGGCCATC
GGTATGCTGGCACGGCTCGACAGCAAGAAGGAACGGGCCACCTTCGTCTTCGTACTGTTGGGTATCGCCTATAGCGCCAG
CATTGGTGGCATAGGCACCCTGGTCGGCAGTCCACCCAATGCCATCGCTGCCGCCCAGATGGGGATTGGCTTCACCGACT
GGATGAAGTTTGGTGTGCCTGTGGTGCTGATCCTGATGCCTTGCGGCATTGCCCTGCTCTATCTGGTGACCCGTCCGCAG
CTCAACCACAGAGTGGAGATCCAGGATGTCACCATCATCTTGTTGATGCTGGCGGCATTCGTGGTATTCCTGACCGAACT
GGTCTCCAACACCGCCACCGCAGCCCTGCTCATCCCGCTGTTTGCCGGGGTGGCTGAAGCGCTGGGCGTATCCCCCATCG
TCATGGCGGTGCTGATCGCCATAGGTGCCTCCTGCGCTTTCATGCTGCCGGTCGCCACCCCACCCAATGCCATCGTCTTC
GCCAGCGGTCATATCCGCCAGAAAGAGATGATGAAAGCCGGTATGGCACTGAACGTCGTGTTCACAGTGCTGCTGGCAGG
GCTTGCCTACTTTGTCGGGGACATTCTCTGA

Upstream 100 bases:

>100_bases
GAGTCCCGGCATGATTTGACGACTTCCCCCTGTTTCAAACAGGGGAATAATTGTAATCTCGGCAACACAACAACAACCAT
AAATTAACCGAGAGAACACT

Downstream 100 bases:

>100_bases
TCCCCAAATGCCCTGAAACAAAAAGCCCTCGCATTGCGAGGGCTTTTTCATATCAAGAGGTTATCAACCTTGTACGTTGC
AGCTCGTCAGATTCCAGATC

Product: NadC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MHTSAVPSTTPSRWLDIKSGIVILDVLLLCAMLAWLPFDPMVNKGLGILVFIAILWLTEALHVTITALLVPLLATVLGVL
DMSKSLTDFANPILFLFFGGFALAAALSKQGLDTLMAGKVMHLANGHLGWGIILLFTITAAMSMWISNTATTAMMLPLAI
GMLARLDSKKERATFVFVLLGIAYSASIGGIGTLVGSPPNAIAAAQMGIGFTDWMKFGVPVVLILMPCGIALLYLVTRPQ
LNHRVEIQDVTIILLMLAAFVVFLTELVSNTATAALLIPLFAGVAEALGVSPIVMAVLIAIGASCAFMLPVATPPNAIVF
ASGHIRQKEMMKAGMALNVVFTVLLAGLAYFVGDIL

Sequences:

>Translated_356_residues
MHTSAVPSTTPSRWLDIKSGIVILDVLLLCAMLAWLPFDPMVNKGLGILVFIAILWLTEALHVTITALLVPLLATVLGVL
DMSKSLTDFANPILFLFFGGFALAAALSKQGLDTLMAGKVMHLANGHLGWGIILLFTITAAMSMWISNTATTAMMLPLAI
GMLARLDSKKERATFVFVLLGIAYSASIGGIGTLVGSPPNAIAAAQMGIGFTDWMKFGVPVVLILMPCGIALLYLVTRPQ
LNHRVEIQDVTIILLMLAAFVVFLTELVSNTATAALLIPLFAGVAEALGVSPIVMAVLIAIGASCAFMLPVATPPNAIVF
ASGHIRQKEMMKAGMALNVVFTVLLAGLAYFVGDIL
>Mature_356_residues
MHTSAVPSTTPSRWLDIKSGIVILDVLLLCAMLAWLPFDPMVNKGLGILVFIAILWLTEALHVTITALLVPLLATVLGVL
DMSKSLTDFANPILFLFFGGFALAAALSKQGLDTLMAGKVMHLANGHLGWGIILLFTITAAMSMWISNTATTAMMLPLAI
GMLARLDSKKERATFVFVLLGIAYSASIGGIGTLVGSPPNAIAAAQMGIGFTDWMKFGVPVVLILMPCGIALLYLVTRPQ
LNHRVEIQDVTIILLMLAAFVVFLTELVSNTATAALLIPLFAGVAEALGVSPIVMAVLIAIGASCAFMLPVATPPNAIVF
ASGHIRQKEMMKAGMALNVVFTVLLAGLAYFVGDIL

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family. NADC subfamily [H]

Homologues:

Organism=Homo sapiens, GI29171306, Length=96, Percent_Identity=45.8333333333333, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI31377715, Length=104, Percent_Identity=39.4230769230769, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI301069346, Length=104, Percent_Identity=39.4230769230769, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI301069349, Length=104, Percent_Identity=39.4230769230769, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI58761541, Length=104, Percent_Identity=39.4230769230769, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI301069353, Length=104, Percent_Identity=39.4230769230769, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI19923838, Length=89, Percent_Identity=43.8202247191011, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI31795546, Length=88, Percent_Identity=39.7727272727273, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4506979, Length=94, Percent_Identity=39.3617021276596, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI225637552, Length=94, Percent_Identity=39.3617021276596, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI225637549, Length=94, Percent_Identity=39.3617021276596, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI219802232, Length=225, Percent_Identity=25.7777777777778, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71988385, Length=197, Percent_Identity=30.9644670050761, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17551790, Length=100, Percent_Identity=39, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI32564681, Length=85, Percent_Identity=41.1764705882353, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32565804, Length=195, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71989118, Length=135, Percent_Identity=36.2962962962963, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324340, Length=263, Percent_Identity=27.7566539923954, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45551633, Length=251, Percent_Identity=28.2868525896414, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281366409, Length=251, Percent_Identity=28.2868525896414, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17737623, Length=251, Percent_Identity=28.2868525896414, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24666468, Length=251, Percent_Identity=28.2868525896414, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI281362114, Length=207, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281362112, Length=207, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281362116, Length=207, Percent_Identity=26.0869565217391, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI78706796, Length=127, Percent_Identity=30.7086614173228, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI78706798, Length=127, Percent_Identity=30.7086614173228, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 37616; Mature: 37616

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTSAVPSTTPSRWLDIKSGIVILDVLLLCAMLAWLPFDPMVNKGLGILVFIAILWLTEA
CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHH
LHVTITALLVPLLATVLGVLDMSKSLTDFANPILFLFFGGFALAAALSKQGLDTLMAGKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
MHLANGHLGWGIILLFTITAAMSMWISNTATTAMMLPLAIGMLARLDSKKERATFVFVLL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GIAYSASIGGIGTLVGSPPNAIAAAQMGIGFTDWMKFGVPVVLILMPCGIALLYLVTRPQ
HHHHHCCCCCHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LNHRVEIQDVTIILLMLAAFVVFLTELVSNTATAALLIPLFAGVAEALGVSPIVMAVLIA
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IGASCAFMLPVATPPNAIVFASGHIRQKEMMKAGMALNVVFTVLLAGLAYFVGDIL
HCCCHHEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHTSAVPSTTPSRWLDIKSGIVILDVLLLCAMLAWLPFDPMVNKGLGILVFIAILWLTEA
CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHH
LHVTITALLVPLLATVLGVLDMSKSLTDFANPILFLFFGGFALAAALSKQGLDTLMAGKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
MHLANGHLGWGIILLFTITAAMSMWISNTATTAMMLPLAIGMLARLDSKKERATFVFVLL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GIAYSASIGGIGTLVGSPPNAIAAAQMGIGFTDWMKFGVPVVLILMPCGIALLYLVTRPQ
HHHHHCCCCCHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LNHRVEIQDVTIILLMLAAFVVFLTELVSNTATAALLIPLFAGVAEALGVSPIVMAVLIA
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IGASCAFMLPVATPPNAIVFASGHIRQKEMMKAGMALNVVFTVLLAGLAYFVGDIL
HCCCHHEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]