| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299248
Identifier: 145299248
GI number: 145299248
Start: 2420446
End: 2420937
Strand: Direct
Name: 145299248
Synonym: ASA_2291
Alternate gene names: NA
Gene position: 2420446-2420937 (Clockwise)
Preceding gene: 145299245
Following gene: 145299250
Centisome position: 51.47
GC content: 60.98
Gene sequence:
>492_bases ATGAGCCAGCCCATGAGTCACCTCCCTTTCGCCGCGTCTGTCAGCATGAGCAATCCCTGGCCAACCCGCCATCAAAGCAA GGTGGAAGAAGCGTGCCACACCGCACCTGCCAGCGATGAGCGACCATTGCTCGACGAGCTGGTGAGACTGAGCCATGGTG ACACGGGCTGGATCCTGCTGATTGCCCCGCCAGGCCTGCCAGTGGCCAAACAGCTGCAGGCTCAGGGGATCAACCCCGCT CGGGTGCTGGTGGTTCACAGTCCCAAGATCAAGAACTGGCAGCTAATGCTGGAGCAGAGTCTGGGCAATGGTCACTGCGC AGCCGTCTTGACCTGGCTGCCTGCACAGGTTTCGCTGGATCGCGTCAAGCTGAGCAAACTGGGGCAACGCTTCGGGGTGC TGACCCGTTTTTTCGAGCCTGCAGGAAAACTACTGCCCGTGCACAGCGGCCCGCTGGCCTACGGCGGACAGGATGTCTAT CTCAACCACTGA
Upstream 100 bases:
>100_bases GCCAGCTTGATCACATTTTTGGCCATAAATGGCTTGTCACTGACCTGAGTTGCAACTACTGCATACACATACAGCATGGT TATCCATACAGGACAAACAT
Downstream 100 bases:
>100_bases TGGTCCAGAACAGCCTGGAGACTCGAAATCGCCGTGAAGAAATGGAACAAGGGGAGAAGGGATCAGGCAAGAGCGCCAGA AAAGAGCAATAGAAGAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSQPMSHLPFAASVSMSNPWPTRHQSKVEEACHTAPASDERPLLDELVRLSHGDTGWILLIAPPGLPVAKQLQAQGINPA RVLVVHSPKIKNWQLMLEQSLGNGHCAAVLTWLPAQVSLDRVKLSKLGQRFGVLTRFFEPAGKLLPVHSGPLAYGGQDVY LNH
Sequences:
>Translated_163_residues MSQPMSHLPFAASVSMSNPWPTRHQSKVEEACHTAPASDERPLLDELVRLSHGDTGWILLIAPPGLPVAKQLQAQGINPA RVLVVHSPKIKNWQLMLEQSLGNGHCAAVLTWLPAQVSLDRVKLSKLGQRFGVLTRFFEPAGKLLPVHSGPLAYGGQDVY LNH >Mature_162_residues SQPMSHLPFAASVSMSNPWPTRHQSKVEEACHTAPASDERPLLDELVRLSHGDTGWILLIAPPGLPVAKQLQAQGINPAR VLVVHSPKIKNWQLMLEQSLGNGHCAAVLTWLPAQVSLDRVKLSKLGQRFGVLTRFFEPAGKLLPVHSGPLAYGGQDVYL NH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17817; Mature: 17686
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPMSHLPFAASVSMSNPWPTRHQSKVEEACHTAPASDERPLLDELVRLSHGDTGWILL CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEE IAPPGLPVAKQLQAQGINPARVLVVHSPKIKNWQLMLEQSLGNGHCAAVLTWLPAQVSLD ECCCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHEEHHCCCCHHHHHEECCCCHHHHH RVKLSKLGQRFGVLTRFFEPAGKLLPVHSGPLAYGGQDVYLNH HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECC >Mature Secondary Structure SQPMSHLPFAASVSMSNPWPTRHQSKVEEACHTAPASDERPLLDELVRLSHGDTGWILL CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEE IAPPGLPVAKQLQAQGINPARVLVVHSPKIKNWQLMLEQSLGNGHCAAVLTWLPAQVSLD ECCCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHEEHHCCCCHHHHHEECCCCHHHHH RVKLSKLGQRFGVLTRFFEPAGKLLPVHSGPLAYGGQDVYLNH HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA